mRNA_P-littoralis_Contig741.21.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig741.21.1
Unique NamemRNA_P-littoralis_Contig741.21.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 2.030e-146
Identity = 225/335 (67.16%), Postives = 270/335 (80.60%), Query Frame = 1
Query:    1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
            A AAAG  PP    NA+V+TH+GQMVSDF++ G+FVGA+FDLFPHGVGGHLD+R R +  + W QILLR+RD RFRK ++FL+CVCALIFRREAI NARWKL GRV    A  +AG+T +DL A A EME GS   S LA+R  IR LI  ME V AG+SWTIYNKR TRMIAIS IMQMGQPL+WLT +PAD N PIV+  AGVE+DVTSRLKAD+P +A +LR VA D VASA F+H+  DAVLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RL L+CHLLVWV+GYNDF+SF +LMDK+P +Y +LA +L++VIFNQ+A+L+D+N  M G
Sbjct:  386 ARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG 719          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 6.840e-146
Identity = 235/317 (74.13%), Postives = 256/317 (80.76%), Query Frame = 1
Query:   85 FYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDHTSSGSSE 1035
            FYD G+FV AFFDLFPHG+GGHLDERRR +SFQEW +ILLRQRDPRFRKHKSFLFCV ALIFRREAIKNARWKLTGR+S  TA+TLA ITPEDLAAAA+EMEQGS   S LANR+ +R L+TTMESV AGSSWTIYNKR TRMIAISLIMQ+GQPLWW+T  PAD   PI                        RLRLVA D VASA  YHSVTDAVLTC +RF A DGDGGVL RVKGY+GMT+EQRRLML+ H+LVWV+G+NDFSSF DLMDK PEKYNKLARFLERVIFNQV S A+VN+AMHGHDHT   SSE
Sbjct:  230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTPRASSE 522          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 3.390e-143
Identity = 225/335 (67.16%), Postives = 270/335 (80.60%), Query Frame = 1
Query:    1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
            A AAAG  PP    NA+V+TH+GQMVSDF++ G+FVGA+FDLFPHGVGGHLD+R R +  + W QILLR+RD RFRK ++FL+CVCALIFRREAI NARWKL GRV    A  +A +T +DL A A EME GS   S LA+R  IR LI  MESV AG+SWTIYNKR TRMIAIS IMQMGQPL+WLT +PAD N PIV+  AGVE+DVTSRLKAD+P +A +LR VA D VASA F+H+  DAVLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RL L+CHLLVWV+GYNDF+SF +LMDK+P +Y +LA +L++VIFNQ+A+L+D+N  M G
Sbjct:  466 ARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRG 799          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE)

HSP 1 Score: 432 bits (1111), Expect = 2.350e-134
Identity = 215/337 (63.80%), Postives = 271/337 (80.42%), Query Frame = 1
Query:    1 AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHD 1011
            AA  AG   P+    AMV+TH+G++VSDF + G+F+ AF+DLFPHGVGG LD+RRR ++F+ W +ILL++RDPRFRKH++FLFCVCALIFRREAI+NAR+KL G +ST  A  LA +TP DL+ AA EME GS   S+L     IR+LI  MESV +G+SWTI+NKR TRMIAIS ++QMGQPL WLT SPAD N PIV++ AGV+IDVTS+LK+D+PD+ ++LRLVA D VASA FYH+    VLTC +RFGA DGDGGVLGRVKGY+GMTEEQ+RLML+ HLLVW++GYNDF SF  LMDK+P +Y +LAR+L+ ++FNQ+A+LAD+N  M G D
Sbjct:  533 AAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSL--NEGIRSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVD 866          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 431 bits (1107), Expect = 4.980e-134
Identity = 218/337 (64.69%), Postives = 252/337 (74.78%), Query Frame = 1
Query:    4 AAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDH 1014
            AAAA  APP LP NAMV+THTG MVSDFYD G+FV A+F+LF HG+GGHLD RRR +S +EW QI LR+RD RF K K+F FCVCAL FRREA  NARWK+ G + +  A+TLA I+PED+ AAA+E+EQG+G+                                       S IMQMGQPLWW+TFSPAD N PIVLQ AGV IDVTSRLK+D+PD+ +RLRLVA DHV SAFFYHSVT AVLTC +RFGA DGDGGVLGRVK  +GMTEEQRRLML+CHLLVWV+GYNDFS F +LMDKSPEKYNKLARFLE+VIFNQVA+L D N+A  GH++
Sbjct:  512 AAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEY 811          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 3.480e-114
Identity = 187/321 (58.26%), Postives = 238/321 (74.14%), Query Frame = 1
Query:   43 NAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHLDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
            N +V+ HTG+MV DF + GV + A+FDLFPHGVGGHLD+R+R ++F +W + LLR+RDPRFRK+++F+FC+ A+IFRREAI NA WKLTGRVS   AQ L GITP+DL A ARE+E G+  +  LANR   R LI TM+SV   +SWT++NKR  RM AIS+I+Q+GQPL+W+T +PAD+N P+V++ AGV++DV+SRLK D P + KRL+L+A D VASA F+H + DAV+   +RFGA DGDGGVLGRVK Y+GMTEEQRRL L+CHLLVWV                   Y +LA FL R IF+QVAS  DV  AM G
Sbjct: 2606 NMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWV-------------------YQELASFLSRTIFSQVASDEDVQHAMTG 2907          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 1.180e-98
Identity = 159/243 (65.43%), Postives = 201/243 (82.72%), Query Frame = 1
Query:  277 EAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHG 1005
            EAI+NARWKLTGR+S   ++TL+ +TPEDLA AA  ME G G  S L++R+ I ALI TMESV AG+SWT +NKR TRMIAIS IMQMGQPL W+T +PAD N PIV++  GV+IDV+S+LKA++PD+  +LRLVA D VASA F+H+  D VL+C +RFGA DGDGG+LGRVKGY+GMTEEQ+RL+L+CHLLVWVFGYNDF+SF DLMD++P +Y +LA++L+ +IFNQVA+LAD+   MHG
Sbjct:  558 EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHG 800          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 3.910e-83
Identity = 162/269 (60.22%), Postives = 179/269 (66.54%), Query Frame = 1
Query:  229 KHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDHTSSGSSE 1035
            KHKSFLF VC LIFRREAIKNARWKLTGRVS  TA+TLA ITPEDLAAA +EMEQGS A S LANR+ +R L+TTMESV AGSSWTIYNK                                                             +   VASA +YHSVTDAVLT  +R  A DGDGGVLGRVKGY+GMTEEQRR+ML+ H++VWV+G+N+FSSF DLMDK PEKY KLARFLERVIFNQVAS ADVN+AMHGHDHT   SSE
Sbjct:  348 KHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVRTLLTTMESVHAGSSWTIYNK-------------------------------------------------------------SERSVASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKY-KLARFLERVIFNQVASFADVNLAMHGHDHTPRASSE 554          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K657_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K657_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 7.710e-72
Identity = 130/309 (42.07%), Postives = 186/309 (60.19%), Query Frame = 1
Query:   16 GLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHL-DERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLAR 939
            G  PP   SNA+V+ H G+++ D  +N  +V      FP G G  L   R+R +SF  W QILL +RD  +R  + FLFCV A+ FR EA+ N R+KL+ + ++  A  +A IT E L A A E++ G   S+ L NR +IR+L+ TM++V   ++WT + K   R  A S+ +  GQP +W+T +P+D N P V+   G +I+++S      PD  KRL ++  D VASA F+H   +AVL   +RF A DGDGG LG +K YIGMTEEQ RLML+ HL+VWV G+         +  S +K+ +LA+
Sbjct:  205 GQPPPGGTSNALVVPH-GEILDDCNNNSAWVEGVMHAFPEGCGSPLCPTRKRLVSFNRWIQILLNRRDSSWRIDRCFLFCVAAIRFRHEALANVRFKLSVQPNSANADAIASITKEHLHAMAEELKSGKKTSAVLNNRPEIRSLLRTMQAVSGDATWTDHGKHRARTTAHSMFILFGQPFFWMTVNPSDLNSPFVMHYGGHDINLSSTCHEQMPDFRKRLDIIVNDPVASAIFFHETIEAVLKYILRFQANDGDGGPLGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTSREQLRQDVGYSLKKHAELAK 512          
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Match: A0A6H5K355_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K355_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.660e-65
Identity = 135/335 (40.30%), Postives = 190/335 (56.72%), Query Frame = 1
Query:   16 GLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGHL-DERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARWKLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALITTMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVLQRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSIRFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDLMDKSPEKYNKLAR------FLERVIFNQVASLADVNMAM 999
            G  PP   SNA+V+ H G+++ D  +N  +V  F   FP G GG L   RR  +SF  W QILL + D  +R  + FL C  A+ FR EAI N R+KL+ R ++  A  +A IT EDL   A E++ G   S+   NR +IRAL    ++V   ++WT + K      A S+ +Q G P +W+T +P+D N P V+Q                 ++ KRL +   D VASA F+H   +AV+   +RFGA DGDGG LG +K YIGMTEEQ RLML+ HL+VWV G+       D + +S +K+ KLAR      ++ R+I+NQV SL +V  ++
Sbjct:  158 GRPPPGGTSNALVVPH-GEILDDSNNNSAWVEGFMHAFPGGCGGPLCPTRRNPVSFNRWIQILLNRGDIAWRVDRCFLCCAAAIRFRHEAISNVRFKLSVRPNSTDANAIASITKEDLHGMADELKSGKRTSALKNNRPEIRALFRKTQAVSGDATWTDHGKHRVLATAHSMFIQFGLPFFWMTANPSDVNSPCVMQCG---------------EYRKRLDITVNDPVASATFFHETMEAVVKYILRFGAKDGDGGALGNIKAYIGMTEEQHRLMLHGHLMVWVHGFTS-RELRDDIGRSLKKHAKLARVQEVLYYIGRLIYNQVMSLEEVEFSL 475          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K8N9_9PHAE2.030e-14667.16Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K882_9PHAE6.840e-14674.13ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5L0L4_9PHAE3.390e-14367.16Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5KIB1_9PHAE2.350e-13463.80ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5JN07_9PHAE4.980e-13464.69ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KTA2_9PHAE3.480e-11458.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3U9_ECTSI1.180e-9865.43ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5J5A5_9PHAE3.910e-8360.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K657_9PHAE7.710e-7242.07Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K355_9PHAE1.660e-6540.30Helitron_like_N domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig741contigP-littoralis_Contig741:74025..75061 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK0
PFAMsHelitron_like_N,PIF1
Model size1038
Max annot lvl2759|Eukaryota
KEGG koko:K15255,ko:K20647
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.64e-138
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota
EC3.6.4.12
DescriptionG-quadruplex DNA unwinding
Cds size1035
COG categoryL
BRITEko00000,ko01000,ko03029,ko03032,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791536.3025632-CDS-P-littoralis_Contig741:74024..750591680791536.3025632-CDS-P-littoralis_Contig741:74024..75059Pylaiella littoralis U1_48CDSP-littoralis_Contig741 74025..75059 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig741.21.1prot_P-littoralis_Contig741.21.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig741 74025..75059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig741.21.1

>prot_P-littoralis_Contig741.21.1 ID=prot_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp
AAAAAGLAPPVLPSNAMVITHTGQMVSDFYDNGVFVGAFFDLFPHGVGGH
LDERRRKISFQEWCQILLRQRDPRFRKHKSFLFCVCALIFRREAIKNARW
KLTGRVSTPTAQTLAGITPEDLAAAAREMEQGSGASSTLANRSDIRALIT
TMESVQAGSSWTIYNKRVTRMIAISLIMQMGQPLWWLTFSPADANGPIVL
QRAGVEIDVTSRLKADYPDHAKRLRLVARDHVASAFFYHSVTDAVLTCSI
RFGAGDGDGGVLGRVKGYIGMTEEQRRLMLYCHLLVWVFGYNDFSSFGDL
MDKSPEKYNKLARFLERVIFNQVASLADVNMAMHGHDHTSSGSSE
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mRNA from alignment at P-littoralis_Contig741:74025..75061+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig741.21.1 ID=mRNA_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1037bp|location=Sequence derived from alignment at P-littoralis_Contig741:74025..75061+ (Pylaiella littoralis U1_48)
GCAGCTGCTGCTGCCGGCTTAGCTCCACCGGTCCTTCCCAGCAATGCCAT GGTCATCACGCACACCGGCCAGATGGTGTCAGACTTCTACGACAATGGCG TGTTCGTAGGGGCGTTTTTTGATCTGTTCCCGCACGGCGTTGGAGGGCAC TTAGACGAAAGGAGGAGGAAGATTAGCTTTCAAGAGTGGTGTCAGATCCT GCTGCGGCAGCGTGATCCCCGTTTCAGGAAGCACAAGAGCTTTTTGTTCT GCGTTTGCGCGCTCATTTTCAGGAGGGAAGCCATCAAGAACGCTCGTTGG AAACTGACTGGCAGGGTATCTACGCCCACCGCGCAGACGCTGGCTGGCAT TACTCCAGAGGATTTGGCTGCTGCCGCGAGGGAAATGGAACAGGGCAGCG GTGCTTCGTCTACTTTGGCCAACCGCTCTGATATTCGGGCGCTCATAACT ACCATGGAATCCGTGCAAGCTGGTTCTTCGTGGACCATCTACAACAAGAG GGTCACGAGGATGATAGCCATCTCGCTTATTATGCAGATGGGCCAGCCAT TGTGGTGGTTGACGTTTAGCCCGGCTGACGCCAACGGCCCCATCGTTTTG CAGCGGGCTGGGGTGGAGATCGATGTTACGAGCCGACTGAAGGCGGATTA CCCTGACCATGCGAAGCGGCTTCGCCTTGTGGCCCGTGACCACGTGGCAT CTGCATTCTTTTACCACTCGGTTACCGACGCTGTGTTGACATGCTCGATT CGATTCGGCGCGGGTGATGGAGATGGAGGCGTGCTGGGGCGGGTCAAGGG TTACATTGGCATGACTGAGGAGCAACGTCGCCTCATGCTGTACTGTCACC TCTTGGTGTGGGTATTCGGGTACAACGATTTTTCGAGCTTCGGCGATCTT ATGGACAAATCCCCGGAGAAGTACAACAAGCTTGCTCGCTTTTTGGAACG AGTCATCTTCAACCAAGTGGCTTCCCTCGCAGACGTCAACATGGCCATGC ATGGGCACGACCACACGTCCAGTGGTTCGAGCGAACA
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Coding sequence (CDS) from alignment at P-littoralis_Contig741:74025..75061+

>mRNA_P-littoralis_Contig741.21.1 ID=mRNA_P-littoralis_Contig741.21.1|Name=mRNA_P-littoralis_Contig741.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig741:74025..75061+ (Pylaiella littoralis U1_48)
GCAGCTGCTGCTGCCGGCTTAGCTCCACCGGTCCTTCCCAGCAATGCCAT
GGTCATCACGCACACCGGCCAGATGGTGTCAGACTTCTACGACAATGGCG
TGTTCGTAGGGGCGTTTTTTGATCTGTTCCCGCACGGCGTTGGAGGGCAC
TTAGACGAAAGGAGGAGGAAGATTAGCTTTCAAGAGTGGTGTCAGATCCT
GCTGCGGCAGCGTGATCCCCGTTTCAGGAAGCACAAGAGCTTTTTGTTCT
GCGTTTGCGCGCTCATTTTCAGGAGGGAAGCCATCAAGAACGCTCGTTGG
AAACTGACTGGCAGGGTATCTACGCCCACCGCGCAGACGCTGGCTGGCAT
TACTCCAGAGGATTTGGCTGCTGCCGCGAGGGAAATGGAACAGGGCAGCG
GTGCTTCGTCTACTTTGGCCAACCGCTCTGATATTCGGGCGCTCATAACT
ACCATGGAATCCGTGCAAGCTGGTTCTTCGTGGACCATCTACAACAAGAG
GGTCACGAGGATGATAGCCATCTCGCTTATTATGCAGATGGGCCAGCCAT
TGTGGTGGTTGACGTTTAGCCCGGCTGACGCCAACGGCCCCATCGTTTTG
CAGCGGGCTGGGGTGGAGATCGATGTTACGAGCCGACTGAAGGCGGATTA
CCCTGACCATGCGAAGCGGCTTCGCCTTGTGGCCCGTGACCACGTGGCAT
CTGCATTCTTTTACCACTCGGTTACCGACGCTGTGTTGACATGCTCGATT
CGATTCGGCGCGGGTGATGGAGATGGAGGCGTGCTGGGGCGGGTCAAGGG
TTACATTGGCATGACTGAGGAGCAACGTCGCCTCATGCTGTACTGTCACC
TCTTGGTGTGGGTATTCGGGTACAACGATTTTTCGAGCTTCGGCGATCTT
ATGGACAAATCCCCGGAGAAGTACAACAAGCTTGCTCGCTTTTTGGAACG
AGTCATCTTCAACCAAGTGGCTTCCCTCGCAGACGTCAACATGGCCATGC
ATGGGCACGACCACACGTCCAGTGGTTCGAGCGAA
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