mRNA_P-littoralis_Contig741.6.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.600e-38 Identity = 112/257 (43.58%), Postives = 149/257 (57.98%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQDRVSESKE-GTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLLIQK---------------AQYDLALSLLGRSLHIRDEQLRLNHPVVLNTLGNMATALHEK 1862
E+L+V+NGF S++MPSGYRDV +N VV++HLCEIQLHLR F+ LK QH VYE AREL VT +M DL + + E +EEMIRLA +W T V+P V AG+YD A+ Q L DA+ E ++ + R+A +T R LA + + QGKF EAE Y R S + T G ++ ++ATGLNN AGLL + +YD A L RSL IR++ +HP V +L N A L +
Sbjct: 183 EVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLRGFFELKGGQHAVYEWARELNVTTDMRSKDLFKNLS-PEVSEEMIRLAGQNWAGTAYVLPDVQLDAGQYDLAEKSHRQELADAEHEAREFEDHDSEESRRAMHGENTARSRLAHVLEKQGKFEEAETIY-RHSMSILKKTHGPDHPEIATGLNNWAGLLSSQHHEANFSLAFRVPCQGKYDAAEPLYVRSLAIREKVYGPDHPEVATSLNNRAEFLRHQ 437
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5KSC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSC7_9PHAE) HSP 1 Score: 149 bits (377), Expect = 4.590e-35 Identity = 93/206 (45.15%), Postives = 129/206 (62.62%), Query Frame = 3
Query: 1134 EFEILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQD---RVSESKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLLIQKAQ 1742
E +L+V+NGF S++MPSGYRDV +N VV++HLCEIQLHLR F+ALK QH VYE AREL VT EM DL + + E +EM+RLA +W T +P + AG+YD A+ + L DA++ RV+E + + RQA + R LA + + QGK AEA+ Y R +E E LG ++ +AT +NN+A LL +A+
Sbjct: 182 EANVLRVKNGFNSDWMPSGYRDVKLNPVVNDHLCEIQLHLREFFALKGGQHVVYEWARELNVTTEMRGEDLFKNVS-PEVMKEMMRLAGQNWRETGFCLPDLQLAAGQYDRAEESHRELLGDAENDAARVAEDHDSKES-RQALLRVNAARARLALVLEKQGKHAEADPLYLRAIEV-AEKMLGRDHPDLATSINNRAELLRAQAR 384
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: D8LQZ4_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ4_ECTSI) HSP 1 Score: 153 bits (386), Expect = 2.880e-34 Identity = 98/197 (49.75%), Postives = 123/197 (62.44%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQD--RVSESKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGL 1724
E+ +V NGF S++MPSGYRDV VN VV+EH+CEIQL LR FY LK QH VYE AREL VT +M L E + E TEEMIRLAEG+W T + +L +AG+Y A+ G + L +A+D R E + G+ WR+A + ST R NL K QGK AEAE Y R ++ E LG + VA LNN+A L
Sbjct: 156 EVRRVTNGFKSDWMPSGYRDVKVNPVVNEHVCEIQLQLRQFYELKHDQHAVYEWARELNVTAKMEAEQL-FENLSREVTEEMIRLAEGNWRGTGYCLVDLLTMAGQYAKAEEGSRKGLSEAEDAFRCIEDR-GSKEWREALLQESTARRNLGYALKMQGKHAEAEPLYERS-QAIREEVLGPKHPDVAEVLNNRATL 349
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: D7G1L3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L3_ECTSI) HSP 1 Score: 147 bits (371), Expect = 1.390e-32 Identity = 92/201 (45.77%), Postives = 124/201 (61.69%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQDRVSE-----SKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLL 1727
++L ++NGF S++MPSGYRDV +N VV+EHLCEIQLHLR F+ALK QH VYE AR+L VT +M DL ET +++ T+EM+ LA +W T V+P + AG YD A+ Q L DA++ V E SKE A + N S LA + QGK+ EAE R + + +E G ++ +VA GLNN+AG L
Sbjct: 185 QVLLIKNGFKSDWMPSGYRDVKLNPVVNEHLCEIQLHLREFFALKGGQHAVYEWARDLNVTTDMRCEDL-FETLSAKVTKEMLHLAGENWRGTGYVLPDLQLAAGEYDLAEKSQRQALTDAENEVREVEDHDSKESRWALDRENEARS----RLATVLDKQGKYEEAETLCVRSL-AIDEKVYGPDHPKVAIGLNNRAGFL 379
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE) HSP 1 Score: 146 bits (369), Expect = 8.430e-32 Identity = 89/197 (45.18%), Postives = 125/197 (63.45%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQD-RVSESKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLL 1727
++L+V NGF S++MPSGYRDV VN VV+EH+CEIQLHLR F+ LK QH VYE AR+LKVT + +L + + + TEEMIRLA+ +W T +P + AG+YD A+ G Q L +A+D R G T R+A+ ++ + L C+ +GK+AEAE Y + ++ EE LG + +AT L+N A LL
Sbjct: 1611 DVLRVANGFNSDWMPSGYRDVKVNPVVNEHICEIQLHLREFFTLKSDQHAVYEWARDLKVTTMLRAENL-FDFLSRDITEEMIRLAQRNWHGTGRFLPRLQLDAGQYDQAEKGYRQKLSEAEDNRRGVEDNGNTESREASLRSA--KAGLGCVLGLKGKYAEAEALYAQC-QAIEEKVLGPEHPSLATTLHNLADLL 1803
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5KZG4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG4_9PHAE) HSP 1 Score: 142 bits (359), Expect = 1.630e-31 Identity = 87/194 (44.85%), Postives = 118/194 (60.82%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQ-DRVSESKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQA 1718
++ +V NGF +++MP GYRDV +N VV+EHLCEIQLHL F LK QH VYE AR+LKVT +M DL T + E TEEMIRLA W T +P +L +G+YD A+ G+ Q L +A+ D+ + + R+A +T R NL + + QGK+ E R R VE E+ TLG ++ A LNN+A
Sbjct: 183 DVRRVTNGFNNDWMPGGYRDVKMNPVVNEHLCEIQLHLGDFSVLKSDQHAVYEWARDLKVTSKMRATDLFS-TLSREVTEEMIRLARQGWFRTGYCLPELLLASGQYDQAEEGLRQQLSEAENDKQGVEDDDSNKSRRALLGVNTARSNLGAVLREQGKYVEVGRLCLRDVEMGED-TLGPDHPDFAIRLNNRA 374
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: D7FTB3_ECTSI (Tetratricopeptide TPR_2 repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB3_ECTSI) HSP 1 Score: 143 bits (360), Expect = 4.940e-31 Identity = 91/200 (45.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQD--RVSESKEGTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLLIQ 1733
++L+V NGF S++MPSGYRDV VN VV EHLCEIQL LR F ALK QH VYE AR+L VT EM D+ E + E EEM+ LA DW TR + ++ AG+Y A+ G+ Q L++A+ RV E +G + R A + + +R L QGK+ EAE Y R VE T+G + A L N+AGLL++
Sbjct: 229 DVLRVANGFNSDWMPSGYRDVKVNAVVHEHLCEIQLQLREFVALKSDQHAVYEWARDLNVTSEMEPEDM-FENISPEVVEEMMHLATEDWHGTRPCLEHLQLAAGQYAQAEKGLKQQLLEAEGAKRVFEDNDGKES-RMALLDENANRAALCRALSEQGKYEEAEHLYTRAVEVL-GVTVGQGHPIYARALGNRAGLLVK 425
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5JLM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM9_9PHAE) HSP 1 Score: 141 bits (356), Expect = 1.400e-30 Identity = 87/197 (44.16%), Postives = 119/197 (60.41%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQDRVSESKEGTTA-WRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGLL 1727
+I +V NGF S++MPSGYRDV +N VV+ HLCEIQLHLR FY LK QH VYE AR+L VT M VAD E + E T+EMIRLAE +W T ++P + AGRY A+ G + L +A+ V K+ T W+ + +L + QGK+ EAE Y R + E+ TLG + ++A +N++A +L
Sbjct: 227 DIFRVTNGFISDWMPSGYRDVKLNAVVNGHLCEIQLHLREFYNLKRHQHVVYEWARDLNVTKAM-VADQLFENLSGEVTDEMIRLAESNWHETGFLLPRLQLAAGRYAHAEDGHRKALSEAERAVRGLKDNATMEWKWVFRQQIQATADLGDCLERQGKYDEAETLYTRAIIDGEK-TLGAGHPEIAVWMNDKAIVL 421
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: A0A6H5K147_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K147_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.050e-30 Identity = 92/219 (42.01%), Postives = 127/219 (57.99%), Query Frame = 3
Query: 1083 VYTGVQNVPLPPRTSEEEFEILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQE----TTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQDRVSESKE-GTTAWRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQAGL 1724
VY+ + +P P +L+V+NGF S++MPSGYRDV VN VV+ HLCEIQL LR F+ALK QH VY+ AREL V VADL+ E + E T+EM+RLA +W T +P + AG+YD + + Q L DA+ + ++ G+ R+A +T R LA + QGK++EAE Y + S E LG + ++A LNN AGL
Sbjct: 270 VYSAITGLPKP-------HHVLRVKNGFNSDWMPSGYRDVKVNPVVNNHLCEIQLQLREFFALKGGQHAVYKWARELNV-----VADLRAEYLYKNLSIEVTKEMMRLAGQNWRGTGYCLPDLQVAAGQYDLVEKDLGQRLTDAERKTHGVEDHGSKESRRALLRLNTARARLAYVRLQQGKYSEAETLYKQAAAS-NELVLGPEHPRLAMDLNNLAGL 475
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Match: D7G8W4_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W4_ECTSI) HSP 1 Score: 137 bits (345), Expect = 4.830e-30 Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 3
Query: 1140 EILKVRNGFASNYMPSGYRDVNVNIVVDEHLCEIQLHLRPFYALKPAQHQVYERARELKVTLEMTVADLQQETTTSETTEEMIRLAEGDWCHTRIVVPYVLFVAGRYDAAQPGVSQWLVDAQDRVSESKEGTTA-WRQANAETSTHRINLACIYKAQGKFAEAERQYGRVVESWEESTLGGNNLQVATGLNNQA 1718
+I +V NGF S++MPSGYRDV +N VV+ HLCEIQLHLR FY LK QH VYE AR+L VT M VAD E + E +EMI LAEG+W T ++P + AGRY A+ G + L +A+ V K+ T W+ + +L + QGK+ EAE Y R + E+ TLG + ++A +N++A
Sbjct: 105 DIFRVTNGFISDWMPSGYRDVKLNAVVNGHLCEIQLHLREFYNLKRHQHVVYEWARDLNVTKAM-VADQLFENLSREVMDEMIHLAEGNWHETGFLLPRLQLSAGRYAHAEDGHRKALSEAERTVRGLKDNATKEWKWVFRQEIQAAADLGDCLERQGKYDEAEPLYTRAIVDGEK-TLGEGHPEIAVWMNDKA 296 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.6.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig741.6.4 >prot_P-littoralis_Contig741.6.4 ID=prot_P-littoralis_Contig741.6.4|Name=mRNA_P-littoralis_Contig741.6.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=353bp MWVYTGVQNVPLPPRTSEEEFEILKVRNGFASNYMPSGYRDVNVNIVVDEback to top mRNA from alignment at P-littoralis_Contig741:8492..18230+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig741.6.4 ID=mRNA_P-littoralis_Contig741.6.4|Name=mRNA_P-littoralis_Contig741.6.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9739bp|location=Sequence derived from alignment at P-littoralis_Contig741:8492..18230+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig741:8492..18230+ >mRNA_P-littoralis_Contig741.6.4 ID=mRNA_P-littoralis_Contig741.6.4|Name=mRNA_P-littoralis_Contig741.6.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1059bp|location=Sequence derived from alignment at P-littoralis_Contig741:8492..18230+ (Pylaiella littoralis U1_48)back to top |