prot_P-littoralis_Contig741.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig741.2.1
Unique Nameprot_P-littoralis_Contig741.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig741.2.1 vs. uniprot
Match: A0A6H5KKK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK7_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 4.090e-7
Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 0 
Query:    7 SIADLVAMENDLEGLPPSLERDAKSNLLKYLLISKVKEYELHYDDLFYNLQLEGSL 62
            +I +L+ +E ++    PSL+RDAK NLLKYL + +V+EY++ YD L++ L   G+L
Sbjct:   10 NIQELLELEKEIRSKIPSLDRDAKVNLLKYLQVQRVQEYQVEYDRLYFTLSRGGNL 65
[Close]
BLAST of mRNA_P-littoralis_Contig741.2.1 vs. uniprot
Match: D7G3B1_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B1_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 6.750e-6
Identity = 30/74 (40.54%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:    5 EFSIADLVAMENDLEGL----------------PPSLERDAKSNLLKYLLISKVKEYELHYDDLFYNLQLEGSL 62
            E  I +L+ +EN+L+G                 PPSLERDAK NLLK+L +  V +Y+  YD+L+Y L  +G L
Sbjct:    4 EPGINELLRLENELQGNAPSVWDKLFECVSIREPPSLERDAKVNLLKFLQVKTVDKYKRAYDNLYYELNKQGGL 77
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig741.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKK7_9PHAE4.090e-744.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3B1_ECTSI6.750e-640.54Kinesin light chain-like protein n=1 Tax=Ectocarpu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig741contigP-littoralis_Contig741:5429..5686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig741.2.1mRNA_P-littoralis_Contig741.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig741 5424..5686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig741.2.1 ID=prot_P-littoralis_Contig741.2.1|Name=mRNA_P-littoralis_Contig741.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
MNVTEFSIADLVAMENDLEGLPPSLERDAKSNLLKYLLISKVKEYELHYD
DLFYNLQLEGSLVWGIRYSIRIMWNSGDVCGVWVYG
back to top