prot_P-littoralis_Contig74.154.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.154.1
Unique Nameprot_P-littoralis_Contig74.154.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length390
Homology
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BLAST of mRNA_P-littoralis_Contig74.154.1 vs. uniprot
Match: D8LKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD6_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 1.280e-8
Identity = 68/267 (25.47%), Postives = 111/267 (41.57%), Query Frame = 0 
Query:  127 VTSRSRRKKSARVLKPISPAACDILE--ERRSSTVVLHKADPFERDSELLARGSLDLQQAAKLVVLNLGADPSLLSHTSDATRRRKLLSDAIYASMHPAGTVFAPIPQPWHHNLGIVHDAMESTGLRAEDHPLVVHYVSTRGGRPSSANILHQRPTADMVLIAHCDTGGSQSFTCNDKVTSEHPFGAPAGTVAIPKSSMIQLPAPGRNQAV--------PTTAL-------SYAVNRFTSVGDTVCCLPIETSLEMSGVALRTGRKI 376
            +T R +++K    ++ +S AA    +  + R     +   D F  D +   R     + +A LV +NLGADPSLL  T +AT R      A+ + +HP GTV   +    + +   +   +++  L  E +P+V  Y+  + GR       H       VL+AH     +  F C+      HP G          S+  + P     +AV        P+TA         + +NRFT  GD V     E +  ++ + L  GR +
Sbjct:   13 MTGRFQQRKGTPSVRTLSKAAAKTEQWAKLRKEVTTVQSVDIFSSDFDSTTRPLEVDRDSAMLVFVNLGADPSLLDGTDEATERLHAGLVALESVLHPRGTVVIAMGSIANFDFPCMEARLKAADLAMEKNPVVSIYLEGQPGRIPERLKNHLTTQGCSVLVAH----KTNDFACHG-----HPLGKRRAARGAASSASFKSPRQASFEAVGFVVSDKHPSTATFLSTSTADHLINRFTVPGDCVLVTTFEEN-PLASLVLGQGRHL 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKD6_ECTSI1.280e-825.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:621625..623478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.154.1mRNA_P-littoralis_Contig74.154.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 621625..623478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.154.1 ID=prot_P-littoralis_Contig74.154.1|Name=mRNA_P-littoralis_Contig74.154.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=390bp
MDADERLDDDYPGGSIDSGGYSDDDEPDGNMEFGGDDSADGASGAGSGVP
DELCDACTPPATSSYRCVVCNMTHTGGGCGASESFGQRDDFAHSLGDKAR
ICVKCKPALEQQGRASNQKERAADGVVTSRSRRKKSARVLKPISPAACDI
LEERRSSTVVLHKADPFERDSELLARGSLDLQQAAKLVVLNLGADPSLLS
HTSDATRRRKLLSDAIYASMHPAGTVFAPIPQPWHHNLGIVHDAMESTGL
RAEDHPLVVHYVSTRGGRPSSANILHQRPTADMVLIAHCDTGGSQSFTCN
DKVTSEHPFGAPAGTVAIPKSSMIQLPAPGRNQAVPTTALSYAVNRFTSV
GDTVCCLPIETSLEMSGVALRTGRKIEVFGRSDAGRETFR
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