prot_P-littoralis_Contig74.149.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig74.149.2
Unique Nameprot_P-littoralis_Contig74.149.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length109
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig74.149.2 vs. uniprot
Match: A0A6H5JJG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG9_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 4.210e-13
Identity = 40/109 (36.70%), Postives = 56/109 (51.38%), Query Frame = 0 
Query:    2 VVAFLKARGELVGQYMPDKAVIRLYDKSKSGVYDMYLTEQKGLHGNISGA-----CSASHFNRIWREECQFLKLTQGRDFMLCNVCTLANQTLHGTPGGEATTDSSIRE 105
            VVAFL    ++ GQ MP+     LY KSK  +Y+ Y    + L+G    +     CS ++FN++W      LKL    DFMLC +CTL  + +HG  G     D + RE
Sbjct:  254 VVAFLHRHEDMYGQKMPNSDQSYLYLKSKLELYEEYSKNTRELYGQDPASLAERLCSKNYFNQVWSAHFGNLKLKPNGDFMLCEICTLLKEKIHGQAGSRGVLDEAERE 362
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.149.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJG9_9PHAE4.210e-1336.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig74contigP-littoralis_Contig74:608513..613489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig74.149.2mRNA_P-littoralis_Contig74.149.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig74 608512..613489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig74.149.2 ID=prot_P-littoralis_Contig74.149.2|Name=mRNA_P-littoralis_Contig74.149.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=109bp
EVVAFLKARGELVGQYMPDKAVIRLYDKSKSGVYDMYLTEQKGLHGNISG
ACSASHFNRIWREECQFLKLTQGRDFMLCNVCTLANQTLHGTPGGEATTD
SSIRESTEA
back to top