mRNA_P-littoralis_Contig74.143.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JFH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFH8_9PHAE) HSP 1 Score: 130 bits (326), Expect = 9.970e-35 Identity = 61/88 (69.32%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ FC+QDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ D+ DI KAQ LRRK
Sbjct: 152 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRFAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVASDQADIDKAQALRRK 239
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JXQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXQ2_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.790e-33 Identity = 60/88 (68.18%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ FC+QDECIYR+ND +R +WVPPN H LKKKGDG GIM SGTIVDN GF+ GD+ DI KAQ RRK
Sbjct: 177 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDDQRFAWVPPNYHALKKKGDGQGIMTSGTIVDNVGFVAGDQADIDKAQAFRRK 264
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5KPN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN2_9PHAE) HSP 1 Score: 124 bits (311), Expect = 3.650e-33 Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ L +RVTSK+ Y +G++ FC+QDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ G + DI +AQ LRRK
Sbjct: 146 ELPQHLCERVTSKKTYSNGRRAIFCYQDECIYRANDGQRSAWVPPNYHALKKKGDGQGIMISGTIVDNVGFVAGGQADIDEAQALRRK 233
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JU25_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU25_9PHAE) HSP 1 Score: 129 bits (324), Expect = 6.520e-33 Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
ELP+ LR+RVTSK+ Y DG++ FC+QDECIYR+ND +R +WVPPN H LKKKGDG GIMISGTIVDN GF+ GD+ DI +A LRRK
Sbjct: 514 ELPQHLRERVTSKKTYSDGRRAIFCYQDECIYRANDGQRYAWVPPNFHALKKKGDGQGIMISGTIVDNVGFVAGDQADIDEAHALRRK 601
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JC29_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC29_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.750e-32 Identity = 58/82 (70.73%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ YP+GK+ FC QDEC+YR ND +R SWVPPN +GLKKKG+G GIMISGTIVDN GF+ G++ DI KAQELRR
Sbjct: 167 LRKRVTSKKAYPEGKRAIFCFQDECMYRGNDDQRCSWVPPNFNGLKKKGEGAGIMISGTIVDNVGFVAGNQSDIDKAQELRR 248
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5KNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH0_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.920e-31 Identity = 58/88 (65.91%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRRK 264
E P LR+RVTSK+ Y DG++ FC+QDEC YR+ND +R +WVPPN + LKK+GDG GIMISGTIVDN GF+ GD+ DI KAQ LRRK
Sbjct: 205 EFPLHLRERVTSKKTYSDGRRAIFCYQDECTYRANDGQRFAWVPPNYYALKKQGDGQGIMISGTIVDNVGFVAGDQADIDKAQTLRRK 292
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5KFI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI8_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.290e-28 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ Y DG++ FC+QDECIYR++D E K+W PP +HGLKKKG+G GIMISGTIV + GF+ G +DDI KAQ+LRR
Sbjct: 252 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRR 333
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JEX5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX5_9PHAE) HSP 1 Score: 115 bits (288), Expect = 4.480e-28 Identity = 54/82 (65.85%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 16 LRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKKAQELRR 261
LR RVTSK+ Y DG++ FC+QDECIYR++D E K+W PP +HGLKKKG+G GIMISGTIV + GF+ G +DDI KAQ+LRR
Sbjct: 268 LRARVTSKKKYADGRRAIFCYQDECIYRAHDGESKAWWPPMMHGLKKKGEGQGIMISGTIVGDVGFVEGTQDDIDKAQDLRR 349
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JJP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP5_9PHAE) HSP 1 Score: 108 bits (271), Expect = 4.690e-26 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIGDEDDIKK 243
EL LR RVTSK+ Y DG+K FCHQDECIYR+ND ER +W PP HGL+KKG+G GIMISGTIV + GF+ G +++I K
Sbjct: 117 ELHPNLRARVTSKKEYADGRKAIFCHQDECIYRANDGERMAWWPPTTHGLRKKGEGQGIMISGTIVGDVGFVEGTQEEIDK 197
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Match: A0A6H5JUL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUL0_9PHAE) HSP 1 Score: 101 bits (252), Expect = 3.450e-23 Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 1 ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLKKKGDGTGIMISGTIVDNEGFIIG 222
ELP+ LR+RVTSK+ Y DG++ C+ DECIYR+ND +R +WVPPN H K+KGD GIMISGTIVDN G G
Sbjct: 378 ELPQHLRERVTSKKTYSDGRRAILCYHDECIYRANDGQRFAWVPPNYHAFKRKGDSQGIMISGTIVDNVGVEYG 451 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.143.1 >prot_P-littoralis_Contig74.143.1 ID=prot_P-littoralis_Contig74.143.1|Name=mRNA_P-littoralis_Contig74.143.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp ELPKTLRDRVTSKRLYPDGKKVKFCHQDECIYRSNDSERKSWVPPNVHGLback to top mRNA from alignment at P-littoralis_Contig74:596700..596963+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig74.143.1 ID=mRNA_P-littoralis_Contig74.143.1|Name=mRNA_P-littoralis_Contig74.143.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig74:596700..596963+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig74:596700..596963+ >mRNA_P-littoralis_Contig74.143.1 ID=mRNA_P-littoralis_Contig74.143.1|Name=mRNA_P-littoralis_Contig74.143.1|organism=Pylaiella littoralis U1_48|type=CDS|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig74:596700..596963+ (Pylaiella littoralis U1_48)back to top |