mRNA_P-littoralis_Contig74.122.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A6H5JP15_9PHAE (Proteasome subunit alpha type n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP15_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.490e-67 Identity = 111/187 (59.36%), Postives = 146/187 (78.07%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVAD-VAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGP-LIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREEIEMAFVEDG 555
GALS AV Y GGI +ATV +T+S LV+D+ TRKIA ++D +A+++SGLAAD+R+LT KA L Y+GKFGEQA++PVG LV++++ ++QEYTQMGGVRPFGVA LVA I DG L+YRL+PSG ++WK AIGKGSAEAE +LHE FE+ +DR AL+L L + RCS GT E++E A++E G
Sbjct: 78 GALSIAVIYAGGIAMATVNQTKSPLVLDLLTRKIARLSDGIAIMHSGLAADARILTKKAEACCLGYKGKFGEQAIIPVGNLVTEVASILQEYTQMGGVRPFGVAFLVAGIGDDGNGLLYRLDPSGSVTSWKAAAIGKGSAEAEVILHEEFEDLVDRDHALELALSIALRCSSGTTEEDVETAYIERG 264
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: D7FQX5_ECTSI (Proteasome subunit alpha type 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX5_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.320e-61 Identity = 99/172 (57.56%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 46 ATVCKTESSLVMDVGTRKIAWVAD-VAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGP-LIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREEIEMAFVEDG 555
ATV +T+S LV+D+ TRKIA ++D +A+++SGLAAD+R+LT KA L Y+ KFGEQA++PVG LV++++ ++QEYTQMGGVRPFG A LVA ID DG L+YRL+PSG ++WK AIGKGSAEAE +LH+ FE+ +DR AL+L L + RCS GT E++E A++E G
Sbjct: 2 ATVSQTKSPLVLDLLTRKIARLSDGIAIMHSGLAADARILTKKAEACCLGYKSKFGEQAIIPVGNLVTEVASILQEYTQMGGVRPFGAAFLVAGIDDDGHGLLYRLDPSGSVTSWKAAAIGKGSAEAEVILHDEFEDLVDRDHALELALSIALRCSSGTTEEDVETAYIERG 173
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A388K5M7_CHABU (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K5M7_CHABU) HSP 1 Score: 130 bits (326), Expect = 3.690e-34 Identity = 77/190 (40.53%), Postives = 115/190 (60.53%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVA-DVAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREEIEMAFVEDGAIGA 567
GA S + G+V+AT K S LV + RKI+ ++ ++ V+YSG+ DSRVL SK+ + +Y + E +P+ LV +I+ VMQE+TQ GGVRPFGV+LLVA D GP +Y+++PSG Y AWK AIGK +A A+ L + + E M+ + A+ + L+ G +I + +E G +GA
Sbjct: 32 GATSLGIKASNGVVIATEKKLPSILVDEQSVRKISVLSKNIGVVYSGMGPDSRVLVSKSRKQAQQYFRLYEEP--IPIAQLVREIAAVMQEFTQSGGVRPFGVSLLVAGYDSSGPQLYQVDPSGSYFAWKASAIGKNTANAKTFLEKRYTEDMELEDAVHTAILTLKEGFEG----QISGSNIEIGIVGA 215
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A5J4Z658_PORPP (Proteasome subunit alpha type n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z658_PORPP) HSP 1 Score: 127 bits (320), Expect = 2.910e-33 Identity = 77/189 (40.74%), Postives = 112/189 (59.26%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVAD-VAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREEIEMAFVEDGAIG 564
GA S + K G+VVAT + SSL+ D +KI+ + D + ++YSG+ DSRVL KA + Y + EQ +PV LV +I+ VMQE+TQ GGVRPFGV+LLVA +D DG +Y+++PSG Y AWK AIGK A+ L + + + M+ + A+ + L+ G +I +E G +G
Sbjct: 32 GATSLGIKAKNGVVVATEKRMPSSLMDDSTLQKISLITDNIGMVYSGMGPDSRVLVRKARKQAQAYFRVYHEQ--IPVSQLVREIASVMQEFTQSGGVRPFGVSLLVAGLDEDGSHLYQVDPSGSYFAWKASAIGKNMVNAKTFLEKRYTDDMELEDAIHTAILTLKEGFEG----QITELNIELGVLG 214
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A7S2ZX75_9RHOD (Proteasome subunit alpha type n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZX75_9RHOD) HSP 1 Score: 127 bits (318), Expect = 5.800e-33 Identity = 75/189 (39.68%), Postives = 110/189 (58.20%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVAD-VAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDL-VLRVLQRCSGGTAREEIEMAFVEDGAI 561
GA S + GIVVAT + S+L+ + +K+A V + V ++YSG+ DSRVL KA + Y + E +PV +V QI+ VMQEYTQ GGVRPFGV+LLVA D +GP +Y+++PSG Y AWK AIGK A+ L + + + ++ + A+ +L + + G IE+ V D +
Sbjct: 32 GATSLGIKASNGIVVATEKRMSSALMDETTLQKVALVTENVGMVYSGMGPDSRVLIRKARKNAQTYYQTYRES--IPVSQVVRQIASVMQEYTQSGGVRPFGVSLLVAGYDYEGPHLYQVDPSGSYFAWKASAIGKNMVNAKTFLEKRYSDDIELEDAIHTSILTLKEGFEGQVTANNIELGVVGDDKV 218
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A1D1YEK7_9ARAE (Proteasome subunit alpha type n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YEK7_9ARAE) HSP 1 Score: 126 bits (316), Expect = 1.450e-32 Identity = 73/190 (38.42%), Postives = 109/190 (57.37%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVA-DVAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREE-IEMAFVEDGAIG 564
G S + G+V+AT K+ SSL+ D K+A V ++ ++YSG+ D RVLT+KA + +Y+ + E P G LV +++ VMQE+TQ GGVRPFGV+LLV D GP +Y+++PSG Y AWK AIGK A+ L + + + M+ + A+ + L+ G E IE+ + G G
Sbjct: 31 GVTSIGIKATNGVVIATEKKSASSLIDDSSLEKVAVVCPNIGMVYSGMGPDFRVLTTKARKAAQKYKRIYNEYP--PTGILVKEVASVMQEFTQSGGVRPFGVSLLVCGYDEKGPGLYQVDPSGSYWAWKASAIGKNMVNAKTFLEKRYNDDMELEDAVHTAIITLKEGFEGEMNEHSIEIGVIGGGNFG 218
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A0A1P2R1_RHIZD (Proteasome subunit alpha type n=22 Tax=Mucorales TaxID=4827 RepID=A0A0A1P2R1_RHIZD) HSP 1 Score: 126 bits (316), Expect = 1.560e-32 Identity = 74/191 (38.74%), Postives = 111/191 (58.12%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWV-ADVAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASID-VDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAREE-IEMAFVEDGAIG 564
G S + GIV+AT K+ SSLV D KI + A++ ++YSG+ D RVL SKA + Y+ + E+ PV LV +++ VMQEYTQ GGVRPFGV++L+A D V+GP +Y+++P+G Y AWK AIGK A+ L + + E M+ + A+ + L+ G E +E+ + +G
Sbjct: 31 GVTSVGIKATNGIVIATEKKSASSLVDDSAVHKIETICANIGMVYSGMGPDFRVLVSKARKAAQAYKRVYNEEP--PVRILVQEVAGVMQEYTQSGGVRPFGVSILIAGYDEVNGPALYQVDPTGSYFAWKASAIGKNMINAKTFLEKRYNEEMELEDAVHTAILTLKEGFEGQMTENSLEIGIIGKSTVG 219
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A059LMD8_9CHLO (Proteasome subunit alpha type n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LMD8_9CHLO) HSP 1 Score: 125 bits (315), Expect = 1.630e-32 Identity = 76/184 (41.30%), Postives = 108/184 (58.70%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVA-DVAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQR-CSGGTAREEIEMAFV 546
GA S + G+V+AT K S+LV D +KIA + ++ + YSG+ DSRVL KA + Y ++ EQ +PV LV +++ VMQE+TQ GGVRPFGV+LL+A D +GP +Y+++PSG Y AWK AIGK A+ L + F E M+ A+ L L+ G + IE+ V
Sbjct: 32 GATSLGIKAANGVVIATEKKLPSTLVDDSTVQKIALLTPNMGMAYSGMGPDSRVLVRKARKAGQAYWQQYHEQ--IPVAQLVREVAAVMQEFTQSGGVRPFGVSLLLAGFDENGPQLYQVDPSGSYFAWKASAIGKNMTNAKTFLEKRFMEDMELDDAIHTALLTLKEGFEGELTGDNIEVGIV 213
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A1D1YAM9_9ARAE (Proteasome subunit alpha type (Fragment) n=11 Tax=Eukaryota TaxID=2759 RepID=A0A1D1YAM9_9ARAE) HSP 1 Score: 125 bits (315), Expect = 1.990e-32 Identity = 72/193 (37.31%), Postives = 110/193 (56.99%), Query Frame = 1
Query: 1 GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVA-DVAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDL-VLRVLQRCSGGTAREEIEMAFVEDGAIGALE 573
G S + GIV+AT K+ S L+ D K+A V ++ ++YSG+ D RVL SKA + +Y+ + E P G LV +++ VMQE+TQ GGVRPFGV+LL+A D GP +Y+++PSG Y AWK AIGK A+ L + + + ++ + A+ +L + + G IE+ + A+G E
Sbjct: 33 GVTSIGIKATNGIVIATEKKSASPLIDDSSLEKVANVCPNIGMVYSGMGPDFRVLLSKARKAAQKYKRIYNEYP--PTGILVKEVASVMQEFTQSGGVRPFGVSLLIAGYDETGPALYQVDPSGSYWAWKASAIGKNMVNAKTFLEKRYNDDIELEDAVHTSILTLKEGFEGQMTENSIEIGIIGGTAVGFTE 223
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Match: A0A813A946_9DINO (PAB1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A946_9DINO) HSP 1 Score: 124 bits (311), Expect = 2.260e-32 Identity = 70/176 (39.77%), Postives = 105/176 (59.66%), Query Frame = 1
Query: 28 KGGIVVATVCKTESSLVMDVGTRKIAWVAD-VAVLYSGLAADSRVLTSKAMEIVLEYRGKFGEQALVPVGTLVSQISMVMQEYTQMGGVRPFGVALLVASIDVDGPLIYRLEPSGCYSAWKCIAIGKGSAEAEAMLHEAFEESMDRQRALDLVLRVLQRCSGGTAR-EEIEMAFVE 549
K G+V+AT K S L+ + KI ++ D + +Y+G+ DSRVL KA + Y +GE +PV LV +I+ VMQE+TQ GGVRPFGVALL+A D DGP +Y+++PSG Y W+ AIGK S A+ L + ++E M+ + A+ L L+ G + +E+ ++
Sbjct: 1 KDGVVIATEKKIPSVLIDEEHFDKIEYITDSIGAIYAGVGPDSRVLIRKAQKKAQAYYLTYGET--IPVLQLVREIAAVMQEFTQSGGVRPFGVALLIAGFDEDGPQLYQVDPSGAYFGWRASAIGKNSTNAKTFLEKRYDEEMELEDAIHTALLTLREGFEGEMNGKNVELGIID 174 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.122.1 >prot_P-littoralis_Contig74.122.1 ID=prot_P-littoralis_Contig74.122.1|Name=mRNA_P-littoralis_Contig74.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=192bp GALSAAVTYKGGIVVATVCKTESSLVMDVGTRKIAWVADVAVLYSGLAADback to top mRNA from alignment at P-littoralis_Contig74:522411..523781+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig74.122.1 ID=mRNA_P-littoralis_Contig74.122.1|Name=mRNA_P-littoralis_Contig74.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1371bp|location=Sequence derived from alignment at P-littoralis_Contig74:522411..523781+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig74:522411..523781+ >mRNA_P-littoralis_Contig74.122.1 ID=mRNA_P-littoralis_Contig74.122.1|Name=mRNA_P-littoralis_Contig74.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=576bp|location=Sequence derived from alignment at P-littoralis_Contig74:522411..523781+ (Pylaiella littoralis U1_48)back to top |