mRNA_P-littoralis_Contig74.74.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: D7FQY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQY9_ECTSI) HSP 1 Score: 506 bits (1302), Expect = 1.140e-162 Identity = 303/626 (48.40%), Postives = 390/626 (62.30%), Query Frame = 1
Query: 349 MGKKGKGTKKEDKPKKDPSSAKTTPKSGTAKLKEALESNNVTVSTPAPRPXXXXRTSASKKSERSNIITNKIGCTESFRWGNSQGAPVLPSMSPILEK------EIDCLIGRRPKRSAHTVFEFLLQ-GWQTYLAWR----GLDESAKRSKTLKDGLSGPLTIVTMIMHWHSQLLRSPG-----VMESGKPLHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPEMSGQDGVFKT--GRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEETVVVGLNCGFGMALRHLATNPFPKQELSSDEVLWKWIPTLFFLAALDLPVMITASSLEDSHYAQVVLKQAVGMYSVVSFLKNLLTFESVALGQVEEEKVVRANKSFIITQGQQPGFKFSVEPPLQVPDARAEMLKKLAACSQPSD-WPRHASIPNPRLGTRAPARSTLGSSLLPLKRYGNYPPDKAPSAETGRRETSETSSTRTHDXXXXXXXXXXXXXXXXXXXXXXPAAAYREREALARAVDGGDDRSCPAIPLAVLELKYSIKTISNQGSEALKITVEDVFMTDPATARLGVRRNSVALYYFDCQKLHDVVFKAVLPKEVDHTTTEVVFRPSQRSVTIV 2169
MGKKGKGTKKE+KPKK+P S++ +LKEALE+ NVT S+ + RTS+SKKS+RS+ + KIGCTESFRW NS+ APVLP M + I L +RS ++ +L+ GW Y +WR L +SA +SKTLKDGLS PL I M+ W ++ G E+G PLHIVVIGATAVNEEKILRE+NYWD++ F+GR++HLYLTGPEMSG+DGVF T GR+EG+ D P M VECWKA+GVDFFLQ+GRL F+KE+TVVVGLNCGFGMA H+ N PKQ L S+EVLWKWIPTL+F AALDLP+MITASSL D+ A+ +L+ VG Y +V + + F+S G ++VV+AN I+ +GQ+PGF FSV+ + D R E+L+K + P D +P HAS+ + G+ R GS L+PLK+YGNYPP+K S + + +T TH PA R E P+ V LKY +S+ S+ L++T++DVFMT+PA ARLG RR SV L+Y+DCQK DVVF+A LP EVDHT T++VFR S S +V
Sbjct: 1 MGKKGKGTKKEEKPKKEPLSSRD-------RLKEALEATNVTTSSAS-----APRTSSSKKSDRSSSVVTKIGCTESFRWDNSEEAPVLPPMPTTVHVGGQEGLRIFALSHMMVERSVPILYNNILRHGWNKYFSWRCGTNALTKSAMKSKTLKDGLSAPLVIAFMVSVWIHAEAQAKGSSRMDAAENGNPLHIVVIGATAVNEEKILRETNYWDELSNFFSGRELHLYLTGPEMSGKDGVFHTKPGREEGQADGPRMRVECWKANGVDFFLQKGRLATFRKEDTVVVGLNCGFGMAGHHVIKNQSPKQALPSNEVLWKWIPTLYFFAALDLPLMITASSLADATTARSMLQYVVGTYELVRITLSPVPFQSTVPG----DQVVQANSHCILVRGQRPGFNFSVQVLPDI-DPRTEILRKALTNNDPKDNFPLHASVR--KAGSHNDTREQ-GSELVPLKKYGNYPPEKVTSID-------DDGATDTH----------------------VPAPGTRAGEG----------------PMKV-NLKYKFLRMSDGASDTLEMTLQDVFMTEPAQARLGARRRSVVLFYYDCQKFCDVVFEAALPDEVDHTKTKIVFRRSDCSAKVV 560
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A6G0XJT5_9STRA (PIH1_CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJT5_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.240e-12 Identity = 65/244 (26.64%), Postives = 106/244 (43.44%), Query Frame = 1
Query: 580 FRWGNSQGAPVLPSMSPILEKEIDCLIGRRPKRSAHTVFEFLLQGWQTYLAWR---GLDESAKRSKTLKDGLSGPLTIV--TMIMHWHSQLLRSPGVMESGKPLHIVVIGATAVNEEKILRESNYWDDVFLIF-NGRKVHLYLTGPEMSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEETVVVGLNCGFGMALRHLATNPFPKQELSSDEVLWKWIPTLFFLAALDLP 1293
FRW + + P LP +P RRP E L QGW+ YL L A + + D LS P+T+V + H + S +H+++IGAT E+++LR++ YWD++ F + K++L+ GPE+S + + T P + V ++ +F +F + V++G N GFG + E S ++ W W+P L +A LP
Sbjct: 23 FRWTDQKRFPPLPQRTP-----------RRPS------VEPLSQGWKGYLEKCHSVNLIPLASQDPSFLDALSFPMTLVYAATALQLHKEWEES---------VHVLIIGATVKAEQRVLRQTRYWDEIAAFFPDVSKINLWFIGPEVSTELDLPATS--------PRLKVRFVHSTAGEFLAAHSG--EFTSKNAVIIGYNTGFGNFV-----------ESSRYDLFWSWLPDLMAIADSGLP 219
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A061SFL9_9CHLO (Mitochondrial splicing suppressor protein 51 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SFL9_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 2.920e-9 Identity = 53/166 (31.93%), Postives = 82/166 (49.40%), Query Frame = 1
Query: 706 LQGWQTYLAWR--GLDESAKR---SKTLKDGLSGPLTIVTMIMHWHSQLLRSPGVME---SGKPLHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPEMSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEETVVVGLNCGFG 1179
L GW + + R G E R L DGLS PLT + + +LLR+ G + S K + I V+GA+ E+++LR+++YWD+V +F G +V L+L GPE+S + G G M C + + DF L++ + ++VG N G G
Sbjct: 95 LTGWSDFFSVRLEGAKEKDGRVVVEPPLLDGLSFPLTFLFALR----ELLRTGGADKAILSRKTILIGVLGASERAEQRLLRDTSYWDEVGHMFPGSRVELWLVGPEVSADSPMRPQGESSG------MAAGCMRGTTGDF------LKKMEGRSPILVGFNTGLG 244
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A485LK42_9STRA (Aste57867_20630 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LK42_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.830e-9 Identity = 54/198 (27.27%), Postives = 87/198 (43.94%), Query Frame = 1
Query: 703 LLQGWQTYL----AWRGLDESAKRSKTLKDGLSGPLTIVTMIMHWHSQLLRSPGVMESGKP--LHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPEMSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEETVVVGLNCGFGMALRHLATNPFPKQELSSDEVLWKWIPTLFFLA 1278
L GWQ YL + R L A + + D LS P+T + + + LLR + P LH++V+GAT E++IL+++NYW+++ F + L+ GPE+S P M V ++ + F L +V+G N GFG + E ++LW W+P L+ +A
Sbjct: 85 LALGWQGYLERCHSGRNLVAMATQDPSFLDALSFPMTFI-----YAATLLRLAALNSHLPPDCLHVLVVGATVKAEQRILQQTNYWNELAAFFPHVPLKLWFIGPEVSADTRPSPLP--------PSMQVGTFRGTAGAFLAAHPFLTP---RHAIVIGYNTGFGNFV-----------ESDRFDLLWSWLPDLYAIA 255
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A0P1B1J6_PLAHL (Mynd finger family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1J6_PLAHL) HSP 1 Score: 67.0 bits (162), Expect = 8.770e-8 Identity = 56/253 (22.13%), Postives = 105/253 (41.50%), Query Frame = 1
Query: 580 FRWGNSQGAPVLPSMSPILEKEIDCLIGRRPKRSAHTVFEFLLQGWQTYLAWRGLDES-------AKRSKTLKDGLSGPLTIVTMIMHWHSQLLRSPGVMESGKPLHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPEMSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLE-QFKKEETVVVGLNCGFGMALRHLATNPFPKQELSSDEVLWKWIPTLFFLAALDLPVMITASS 1314
FRW S+ P+LP P + +D L GW+ +L R S A ++ D LS P+T++ ++ + L +++IG++ E+++LR +NYW+++ F KV L+ GPE+ D +++ G Q+ +L + + +V+VG N GFG + + E+L+ W+P L+ +A ++P + T ++
Sbjct: 46 FRWLESKEFPLLP---PFPNRSVD-----------------LSCGWKEFLVSRSSPNSNADLVAKAVNDPSMLDALSFPITLLHVLQQLE---------LSVDSDLRVLIIGSSRKAEQRVLRITNYWNEISSFFAKAKVTLFFIGPEVDEPDADRINNALP-------FNLKVHHFKGTFGSFQKSQLYGECAPQASVIVGYNTGFGNFV-----------DSHRHELLFSWLPDLYRIAESNIPAIFTCAN 251
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A7S2JE84_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JE84_9EUKA) HSP 1 Score: 60.1 bits (144), Expect = 4.950e-6 Identity = 50/208 (24.04%), Postives = 92/208 (44.23%), Query Frame = 1
Query: 706 LQGWQTYLAWRGLDESAKRSKT---LKDGLSGPLTIVTMIMHWHSQLLRSPGVMESGKPLHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPE--MSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEETVVVGLNCGFGMALRHLATNPFPKQELSSDEVLWKWIPTLFFLAALDLPVMITASS 1314
L GW++YL R +++ + + DGLS LT++ + + Q + PG PL ++VIGA++ EE+++R+S YW ++ G + L GPE ++ + + G P + C+ + + + E+T+ VG N G G A + F ++ W+P L L + L + T ++
Sbjct: 5 LTGWRSYLEMRLPPDASGTIRVQPPMLDGLSYVLTLLFALQQLNLQPPK-PG------PLTLLVIGASSKAEERLMRDSTYWQELRHFLPGTSLELVFVGPEIALAAHGRISRHG--------PRLTSRCFHGTLGELLRKE---PHHTAEDTIAVGFNTGMGNASAGMKKGGF--------SLMKSWLPDLMALLEMGLVGIFTCAN 186
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Match: A0A7S4BE74_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BE74_CHRCT) HSP 1 Score: 58.2 bits (139), Expect = 6.770e-5 Identity = 64/233 (27.47%), Postives = 97/233 (41.63%), Query Frame = 1
Query: 568 CTESFRWGNSQGAPVL---PSMSPILEKEIDCLIGRRPKRSAHTVFEFLLQGWQTYLAWRGLDES---AKRSKTLKDGLSGPLTIVTMIMHWHSQLLR----SPGVMESGKPLHIVVIGATAVNEEKILRESNYWDDVFLIFNGRKVHLYLTGPEMSGQDGVFKTGRKEGKEDEPEMHVECWKASGVDFFLQRGRLEQFKKEET-------VVVGLNCGFGMALRHLATNPFP 1215
C + RW S P L PS++P P R F L W++Y+ R ++ + DGLS PL+++ + Q+LR SPG PL+++VIGA++ EE++ RESNYW ++ HLY GPE+S V +++ + +G + Q +EE+ VVVG N G G L L + P
Sbjct: 100 CVGTLRWDASARFPPLSAWPSVAPT------------PHRP------FALTDWRSYVEARFEPDAHGTIRLDPLALDGLSYPLSLLRAL-----QVLRLRPPSPG------PLNLLVIGASSKAEERVWRESNYWQELQHFLPA--THLYFVGPEISAD----------------RHRVVDERSATLRATSYKGTVGQLLEEESHLTPANSVVVGFNTGMGSGLWPLMKSWLP 285 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.74.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.74.1 >prot_P-littoralis_Contig74.74.1 ID=prot_P-littoralis_Contig74.74.1|Name=mRNA_P-littoralis_Contig74.74.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=616bp MGKKGKGTKKEDKPKKDPSSAKTTPKSGTAKLKEALESNNVTVSTPAPRPback to top mRNA from alignment at P-littoralis_Contig74:329459..350823+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig74.74.1 ID=mRNA_P-littoralis_Contig74.74.1|Name=mRNA_P-littoralis_Contig74.74.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=21365bp|location=Sequence derived from alignment at P-littoralis_Contig74:329459..350823+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig74:329459..350823+ >mRNA_P-littoralis_Contig74.74.1 ID=mRNA_P-littoralis_Contig74.74.1|Name=mRNA_P-littoralis_Contig74.74.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1848bp|location=Sequence derived from alignment at P-littoralis_Contig74:329459..350823+ (Pylaiella littoralis U1_48)back to top |