mRNA_P-littoralis_Contig74.42.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A6H5KX57_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX57_9PHAE) HSP 1 Score: 755 bits (1950), Expect = 6.510e-255 Identity = 472/782 (60.36%), Postives = 527/782 (67.39%), Query Frame = 1
Query: 463 AAAPPTNQRAPASPVMTLRGYQSRIAQTCEDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALP-GFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPR----FASPLPPSGKLAPREWGAYAHKLAYSGGVLVGR-----ARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTY-FRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGG---AVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAAGTAAGKKAAKKLAAEKLLADLRAAV 2766
AAA A +P TLRGYQSRIA C NTIV+LPTGSGKTL+AAE IKRL PALFLVPT ++VDQQA AL SWTGL V KY GG LP F +LVSTP+AFK AQ+ G + L W F VIFDEVHH LKDHPYRKLALSLR+SSL+ PRVVGLTASYSYAVG AK +ASLT++C EL IT ETATR+ELEA GY A GAAAEVLL P S + P GVVP+AD+KPHEMG TFFRREA+GT TAF+RLLM CVRSME A P F+SP+PPSGKLAPREWGAYAHKLA A++ TA +G G N K+CTRCG + AG+ R +SS+ P LHL LAE+EHWYEAVKT+VVSWEE ED+A TIL+MF CTGS R +++ VWP+ VRQKISAFW VP TF RY+ LK V+++KYDHHG FRGIVFV QR+TTH L H+IA DPR A RFS ACLYASSSPATASLSVTKAQAQ SIEAFRSG VNLLL+TVVAEEG+D+P ANCVVRYDAM+H VSMVQGRGRAREE+SSFVVL ER DRTTADLEAVERQQ + V F PPA XXXXXXXXXXXXX A+SA+N F++KTK LE+ SKGAGG WVCTLSYESPLREL A GTA GKKAAKKLAA KLLA LR AV
Sbjct: 7 AAAATPRATAAKAPAKTLRGYQSRIANKCLHDNTIVVLPTGSGKTLLAAEAIKRL------GPPALFLVPTRLMVDQQAEALGSWTGLSVTKYMGGAGLPPSTFKILVSTPQAFKAAQQN---GIGH-----LQWSAFRVVIFDEVHHVLKDHPYRKLALSLRRSSLTPPPPASPATGSSSH--PRVVGLTASYSYAVGDAKIEASLTRLCHELRITATETATRQELEAGGYQAMGAAAEVLLDPR--------PDSAGTTDDTAPAGVVPEADQKPHEMGTTFFRREAKGTSTAFTRLLMACVRSMEEATAXXXXXXXXXXXSQPHQTLLFSSPMPPSGKLAPREWGAYAHKLALKAAXXXXXXXXXXAKMPETA-AGRGMGGGGDFTGNSVAKRCTRCGIDAN---AGQPR---RSSSRPTLHLLLAELEHWYEAVKTMVVSWEEREDDAATILDMFGCTGSPSHRAASEA--VWPSDVRQKISAFWEAVPRTFRRYDKLKNVLLDKYDHHGXXXXXXXXXXXKKCFRGIVFVVQRVTTHVLAHVIAADPRLAPRFSAACLYASSSPATASLSVTKAQAQASIEAFRSGSVNLLLATVVAEEGIDIPKANCVVRYDAMMHGVSMVQGRGRAREEDSSFVVLSERPDRTTADLEAVERQQQRLVWGFRPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALSALNFFAQKTKAALEDGWSKGAGGQWVCTLSYESPLRELRATGTAPGKKAAKKLAAAKLLAVLREAV 755
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A1Q9EU77_SYMMI (Endoribonuclease Dicer-like 2a n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EU77_SYMMI) HSP 1 Score: 471 bits (1211), Expect = 1.730e-147 Identity = 325/767 (42.37%), Postives = 421/767 (54.89%), Query Frame = 1
Query: 508 MTLRGYQSRIAQTC-EDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQRE----VWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQ-FVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAAGT-------AAGKKAAKKLAAEKLLADLRAAVP 2769
M LR YQ+R+ + NT+V+LPTG+GKTLIA+ELI+RL P LFLVPTC+LV+QQA A+R WTGL VA++ GGM+LP F+VLVSTP+AF++ Q + AA+ W F V+FDEVHH LKDHPYR+LALSL S L G P+++GL+AS +YAVG K + +T++C EL I TA +EL GYH+ AAE +L PA + P GV+P A+RKPH M TFF R RG T F++ L V+ +E T AA + F SPL APR WG YAHK + C++ LA +EHWYEA++ LV SWEEAED A L+M +RE +WP ++ FW E + FPR+EHLK ++ Y+H + S + G+ FRGI+FV+QR+ TH LEH+I D S+F AC+YA+SSPATAS SV+ A ++ + F G VNLL++TVVAEEGMDVPAANCV+R+D M+++VS VQGRGRAR+E+SSFVVL ER DR T+ L AVE QQL+ V SF P + QRSRER AR VLL T+ A++A+NL+ KKTKV+L+E S G + C+L YES LR + A G+ A GKK AK+ AA LL L P
Sbjct: 1 MELRAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRL------GPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSLPAHFDVLVSTPKAFQMTQSKG--------AAVFQWDAFKLVVFDEVHHVLKDHPYRRLALSL--SKLQLG--------------PQILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSK--AAEPVL--------------PAKLPSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLE---TTVAAVDSG-------FKSPLQ---NPAPRTWGDYAHK----------------------------------RIPTCSK----------------------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVG------------EREPTAGLWPPVAEATLAQFWHEAGEYFPRFEHLKDALL--YEH-----ATLSRTHGS-FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNPERVATDTRNETAA-----QRSRERNAREVLL-TSDNASTNALAALNLYCKKTKVELQEEHSTD-GKDFTCSLKYESVLRSVEATGSYGLKCRAAEGKKQAKRAAAAALLEKLSQQEP 619
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A7S4V2U7_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4V2U7_9DINO) HSP 1 Score: 466 bits (1199), Expect = 9.300e-146 Identity = 325/753 (43.16%), Postives = 409/753 (54.32%), Query Frame = 1
Query: 508 MTLRGYQSRIAQTCE-DANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAA-GTA-AGKKAAKKLAAEKLLADLR 2757
M LR YQSRI E NT+V+LPTG+GKTLIAAELIKR+ G LFLVPTC+LV+QQA A+ WT L V +Y GG LP F VLVSTP+AF+VAQ A GT +L W F V+FDEVHH LKDHPYRKLA L Q + SA PRV+GLTAS +YAVG + +A++ ++C +L I +AT +EL +SGYHA A AEV P P GVVP A RKPH M TFF R T T ++ L V +ME + S P F +PL + + WG YA++ ++ +P A +EHWYEA+K LVVSWEEA D A T LEM C A QQ +W RQ S FW +P++FPR+E+LK V++ +++ S+ +GG FRGIVF +QR+ TH LEH+I D +S F TAC+YA+SSPATASL+VT Q++ ++ F SG VNLL++T VAEEGMDVPA NC + +D M+++VS VQ RGRAR+ NS+FVVL ER DR + L VE+QQL V F P + QRSRER AR VL AA AV+A+NLF KKTK ++ E + G LW CTLSY S LR + AA G A A +KAAK+ AA L+ LR
Sbjct: 1 MELRPYQSRIVGQAEASGNTVVVLPTGAGKTLIAAELIKRVGG------TCLFLVPTCLLVEQQAKAVGKWTKLSVGEYMGGATLPSRFQVLVSTPKAFQVAQ-------AKGTVSLA-WSAFRLVVFDEVHHVLKDHPYRKLAQHLAQVNGSA---------------PRVLGLTASLTYAVGEKQVEAAIRRLCTDLRIASMASATDEELRSSGYHALKAKAEV---------------EPVDIPGAVPAGVVPAAWRKPHMMHETFFERLRNNTSTLAAQRLYAAVSAMEAQV----------SSADPEFRTPLH---NRSLKAWGEYANR---------------------------------------------------------NKDRSPL-----YAALEHWYEALKILVVSWEEAADAAATFLEM--CGEKA-----AQQHLLWSQAARQAQSMFWNGLPESFPRFENLKDVLLYRHESF------SAATGG--FRGIVFAQQRVMTHILEHVIRRDEELSSCFRTACIYATSSPATASLAVTAHQSKRRLDQFASGAVNLLIATSVAEEGMDVPAMNCAICFDPMLNSVSFVQRRGRARQANSAFVVLSEREDRNASKLAEVEQQQLAIVRGFNPEKCAADPAVETVA-----QRSRERNAREVLARVAAPSE--AVAALNLFCKKTKAEVREEWGQ-QGKLWTCTLSYSSALRSVSAACGQAVADRKAAKREAAAALVETLR 611
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A812TEW1_9DINO (DCL2A protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TEW1_9DINO) HSP 1 Score: 470 bits (1210), Expect = 3.590e-142 Identity = 324/762 (42.52%), Postives = 420/762 (55.12%), Query Frame = 1
Query: 508 MTLRGYQSRIAQTC-EDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQRE----VWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQ-FVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAAGT-------AAGKKAAKKLAAEKLLADL 2754
M LR YQ+R+ + NT+V+LPTG+GKTLIA+ELI+RL P LFLVPTC+LV+QQA A+R WTGL VA++ GGM+LP F+VLVSTP+AF++ Q + AA+ W F V+FDEVHH LKDHPYR+LALSL S L G P+++GL+AS +YAVG K + +T++C EL I TA +EL GYH+ AAE +L PA + P GV+P A+RKPH M TFF R RG T F++ L V+ +E T AA + F SPL APR WG YAHK + C++ LA +EHWYEA++ LV SWEEAED A L+M +RE +WP ++ FW E + FPR+EHLK ++ Y+H + S + G+ FRGI+FV+QR+ TH LEH+I D S+F AC+YA+SSPATAS SV+ A ++ + F G VNLL++TVVAEEGMDVPAANCV+R+D M+++VS VQGRGRAR+E+SSFVVL ER DR T+ L AVE QQL+ V SF P + QRSRER AR VLL T+ A++A+NL+ KKTKV+L+E S G + C+L YES LR + A G+ A GKK AK+ AA LL L
Sbjct: 1 MELRAYQARLLEEILASGNTLVVLPTGAGKTLIASELIRRL------GPPCLFLVPTCLLVEQQAKAVRDWTGLQVAEFMGGMSLPAHFDVLVSTPKAFQMTQSKG--------AAVFQWDAFKLVVFDEVHHVLKDHPYRRLALSL--SKLQLG--------------PQILGLSASLTYAVGEGKVQKDVTRICRELQIRHMATAGGEELATGGYHSK--AAEPVL--------------PAKLPSFVPEGVLPAAERKPHLMVRTFFDRLQRGMSTQFTKKLFSVVQCLE---TTVAAVDSG-------FKSPLQ---NPAPRTWGDYAHK----------------------------------RIPTCSK----------------------------LASLEHWYEALRMLVTSWEEAEDAAVAYLQMVG------------EREPTAGLWPPVAEATLAQFWHEAGEYFPRFEHLKDALL--YEH-----ATLSRTHGS-FRGILFVQQRIMTHVLEHVILTDGELVSKFKPACIYATSSPATASYSVSAADSKARLAQFADGSVNLLIATVVAEEGMDVPAANCVIRFDPMINSVSFVQGRGRARQEDSSFVVLSERPDRPTSSLAAVEAQQLEKIVRSFNPERVATDTRNETAA-----QRSRERNAREVLL-TSDNASTNALAALNLYCKKTKVELQEEHSTD-GKDFTCSLKYESVLRSVEATGSYGLKCRAAEGKKQAKRAAAAALLEKL 614
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A812RBN0_9DINO (DCL2A protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RBN0_9DINO) HSP 1 Score: 451 bits (1159), Expect = 8.610e-140 Identity = 313/759 (41.24%), Postives = 406/759 (53.49%), Query Frame = 1
Query: 505 VMTLRGYQSRIAQTC-EDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAAGT-------AAGKKAAKKLAAEKLLADLR 2757
+M LRGYQ RI NTIV+LPTG+GKTLIA+EL+KRL G LFLVPTC+LV+QQA A+R WTGL VA++ GG ++P F+VLVSTP+AF Q + W F V+FDEVHH LK+HPYR+LALSL S L AG P+V+GL+AS +YAVG + + L ++ EL I TAT ELEA GYH+ A L T + P +PE GV+P +RKPH M FF R G T F++ L+ VR+ME A+ + + SP Q APR WG YAH+ RV +A + A +EHWYEA++ LV SWEEAED ATT L M S F WP+ V + FW D+FPR EHLK ++ +Y+ + S + G+ FR I+FV+QR+ TH LEH + D A+R + AC+YA++SPAT S V+ A ++ + +F G +NLL++TVVAEEGMDVPAANCV+R+D M+++VS+VQGRGRAR+ +SSFVVL ER DR T+ L AVE QQL+ + +F+P QRSRER AR VLL A G A +NL+ KKTKV L+E G C L YES LR + AAG+ A G+K AK++AA LLA L+
Sbjct: 16 MMQLRGYQQRIVDDALTTGNTIVVLPTGAGKTLIASELMKRLGPG------CLFLVPTCLLVEQQAKAIREWTGLRVAEFMGGASMPQQFDVLVSTPKAFHTMQAKG--------VRSFRWDAFKLVVFDEVHHVLKEHPYRQLALSL--SRLPAGP-------------PQVLGLSASLTYAVGEQRVEQELARISRELRIQHMATATAWELEAGGYHSKAGQA-TLPTWNLPCSVPE--------------GVLPIGERKPHLMAKKFFDRLQEGASTPFTQRLLSVVRAMESAVASEDSGFKSPLQNP-------------APRMWGDYAHR------------RVGQSA--------------------------------------------------KFASLEHWYEALRMLVTSWEEAEDAATTYLRMVGEGQSKPF--------TWPSEVEAASAQFWHNSADSFPRLEHLKDALLYEYE-------TLSTTHGS-FRCILFVQQRIMTHILEHFVRTDEALANRLNPACIYATASPATPSFRVSAADSKARLASFAKGGINLLIATVVAEEGMDVPAANCVIRFDPMINSVSLVQGRGRARQPDSSFVVLCERQDRPTSTLAAVEAQQLEIIRNFKPDHVADATQDSAA------QRSRERNAREVLL---APGASNATEVLNLYCKKTKVQLQEEFVP-TGPEIECRLKYESILRSVQAAGSSGPFSRAAEGRKQAKRMAAAALLAALQ 629
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A812IWI1_SYMPI (CFAP61 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IWI1_SYMPI) HSP 1 Score: 443 bits (1139), Expect = 1.190e-125 Identity = 316/769 (41.09%), Postives = 403/769 (52.41%), Query Frame = 1
Query: 520 GYQSRIAQTCEDA-NTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDH----HGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQ------------FVTSFEPPAAGSXXXXXXXXXXXXXQRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSKGAGGLWVCTLSYESPLRELHAAGT-------AAGKKAAKKLAAEKLLADL 2754
GYQ RI A N IV+LPTG+GKTLIA+ELI L P L VPTC+LV+QQA A R WTGL VA++ GG+++P F+VLVSTP+AF++ Q R G A+ G F V+FDEVHH LKDHPYRKLALSL + + G P+V+GL+AS +YA+G K ++ LT++C EL I TA+ ELEA GYH+ A E +L S P + P GV+P RKPH M F+ R +G T F++ L+ VR ME A+ A+ SP Q HP APR WG YA+K R+ +A +EHWYEA++ LV SWEEAED ATT L M G + WP V FW + PD+FPR+EHLK ++ + + HG FRGIVFV+QR+ TH LEH+I ND AS+ + AC+YA++SPAT S V+ A ++ + F +GR+NLL++TVVAEEGMDVPAANCV+R+D M++AVS VQGRGRAR+ +SSFVVL ER DR T+ L AVE QQLQ V +F P A Q+SRER AR VL A G AV +NL+ KKTKV+L E ++ G + C L YES LR + A G+ A GKK AK+ AA LL L
Sbjct: 1997 GYQERIVTEVRAAGNAIVVLPTGAGKTLIASELITGL------GPPCL--VPTCMLVEQQARAAREWTGLQVAEFMGGVSVPQRFDVLVSTPKAFQMTQSR-------GAASFRFQG-FKLVVFDEVHHVLKDHPYRKLALSLSKLT---------------DGRPQVLGLSASLTYAIGERKVESDLTRICRELNIQHMATASENELEACGYHSRPA--EAVLPVSLP--------------NVTPEGVLPVERRKPHLMASKFWERAQQGKSTQFTKQLLSVVRLMEAAVAEVDASFESPLQ-HP------------APRTWGEYANK------------RIPQSAN--------------------------------------------------FMSLEHWYEALRMLVTSWEEAEDAATTYLRM---VGQTRLTVGA-----WPLEVETACVRFWEKRPDSFPRFEHLKDALLYELEKLSKLHGS------------FRGIVFVQQRIMTHILEHLIQNDGDLASKLTPACIYATTSPATPSFRVSAADSKARLAEFANGRINLLIATVVAEEGMDVPAANCVIRFDPMINAVSFVQGRGRARQADSSFVVLSERQDRPTSTLAAVEAQQLQKLRPTFESSFGRIVQNFNPDCA-----TRSASTDLAAQQSRERNAREVLQNVA-RAGANAVGLLNLYCKKTKVELHEELNL-VGSEFTCVLKYESILRSVQATGSSGPFSRAADGKKQAKRNAAAALLETL 2616
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: D7FR00_ECTSI (ATP-dependent RNA helicase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR00_ECTSI) HSP 1 Score: 419 bits (1077), Expect = 1.110e-123 Identity = 275/516 (53.29%), Postives = 318/516 (61.63%), Query Frame = 1
Query: 907 LKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHL-QLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEPPAAG 2451
LK HPYR+LA SL L + GT RV+GLTASYSY G AK + L ++ EL IT ETA+ +ELEA G H EVLL PS P GV+ +A+R + TF RE R T FSR +M+CVRSME AI + HP FASPL G++ REWGAYAH LA++G XXXXXXXXX G T + C T R+ PP +H LAE+EHWYEAV+ LVVSWEE EDEA IL+MF CTGS R + VWP VRQKISAFW VP FPR+EHLKKV+++KYDHHGG G SS G F GIVFVRQRMTTH L H+IA DPR A RFS ACLYASSSP TASLS+++ +E++EAFRSG VNLLLST VAEEG+DVP ANCVVRYD M HAVSMVQGRGRAR SSFVVL ER+DRTTADLEAVE++QL + + EP G
Sbjct: 2 LKKHPYRELAQSLCYWRLQS--------PPSALGTQRVLGLTASYSYEFGNAKAEDRLRQLLSELCITNIETASGQELEAGGCH--DVVTEVLLPPS----------------TATPSGVLLEANRT-QQQATTFLLRERRHEGTDFSRRIMICVRSMEKAITAVS--------EHPAFASPLVLDGQMKTREWGAYAHSLAHNG--------AGXXXXXXXXXXXXXXXXXXGATNR------GCRTNRYSRQ------PQPPSVHRPMLAELEHWYEAVRALVVSWEEREDEAAIILDMFGCTGSPSHRAPPEA--VWPGDVRQKISAFWEAVPRMFPRFEHLKKVLLDKYDHHGGDGSGSSD--GEAFLGIVFVRQRMTTHVLAHVIAADPRMAPRFSAACLYASSSPTTASLSLSERDTEENLEAFRSGSVNLLLSTCVAEEGIDVPDANCVVRYDPMDHAVSMVQGRGRARGAESSFVVLCERADRTTADLEAVEQRQLWHLRNMEPDHQG 458
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A6H5L4Y7_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y7_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 9.440e-122 Identity = 253/479 (52.82%), Postives = 295/479 (61.59%), Query Frame = 1
Query: 1006 GTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHL-QLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEP 2439
GT RV+GLTASYSY G + KA L + EL +T ET + +EL A G HA A AEVLL PS + P GV+P+ADR + F RE R T F+ +M CVR ME AI + HP FASPL G++ EWGAYAH LAY+G +G G G T + C T R+ PP +H LAE+EHWYEAVK LVVSWEE EDEA TIL+MF CTGS R + + VWP VRQKIS FW VP TFPR+EHLK V+++KYDHHGG G S GS G FRGIVFVRQR+TTH L H+IA DP A FS ACL ASSSPATASLS+++ QE +EAFRSG VNLLLST VAEEG+DV ANCVVRYD++ H VSMVQGRGRAR E SSFVVL ER+DRTTADLEAVE++QL + + EP
Sbjct: 37 GTQRVLGLTASYSYEFGNPRAKARLRALSSELCLTNIETVSHQELRAGGCHA--AMAEVLLPPS----------------TVTPSGVLPEADRT-QQPATMFLLRERRNEGTDFAGRIMACVRGMEKAITAVS--------EHPTFASPLVLDGQMKACEWGAYAHSLAYNG--------------AGGG----------GATNR------GCPTNQYSRQ------PQPPSVHRPMLAELEHWYEAVKVLVVSWEEREDEAATILDMFGCTGSPSHRVAPEV--VWPGDVRQKISVFWEAVPGTFPRFEHLKNVLLDKYDHHGGNG--SGGSEGEAFRGIVFVRQRVTTHVLAHVIAADPSMAP-FSAACLCASSSPATASLSLSERATQEILEAFRSGSVNLLLSTAVAEEGIDVADANCVVRYDSIDHVVSMVQGRGRARGEKSSFVVLCERADRTTADLEAVEQRQLWQLRNIEP 447
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A7S1FQB5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQB5_9STRA) HSP 1 Score: 319 bits (818), Expect = 9.630e-90 Identity = 265/774 (34.24%), Postives = 368/774 (47.55%), Query Frame = 1
Query: 514 LRGYQSRIAQTCEDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGL---VVAKYRGGMALPGFF-----------NVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTP----SCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLP-PSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDTFPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFVTSFEPPAAGSXXXXXXXXXXXXX-QRSRERGARAVLLGTAAEGGGGAVSAVNLFSKKTKVDLEESVSK-GAGGLWVCTLSYESPL-RELHAAGTAAGKKAAKKLAAEKLLADLRAAVP 2769
LR YQ +I + D N IV+LPTG+GKT+I AE ++ ET LFLVPT LV QQA +R W G V + GG +P F +VLVSTP+AF +AQ R+ L W + V+FDEVHH LK+HPYRK+ALS+ ++ ++VGLTAS SY+V A K + + E+ + TAT +EL A GYH+ AA E+ L +CPP ADRKPH M TF+RR CT ++ L+ ++ EGA+ +R F SPL P K+A +WG HK+A Q P + + E+E WYE+++ L++SWEE + + L+M K + E + R+ D + R LKKV+++K S S S F GIVFV+QR+T H ++ + D ++R +A LYA SSPAT SLS+ K A + FR G++NLL+STVVAEEG+DVP+ANCV+R+D +++AVS VQGRGRAR+E SSFVVL ER DR TA L+ VE +QL+ +SF + S Q++RE A ++L +G A V + KTK +L + + ++C +YES + G KK AKK AA L+ L+A+VP
Sbjct: 25 LRPYQKKIVDSIRDQNVIVLLPTGAGKTVIPAEHVR------ETGKRTLFLVPTVNLVHQQAKFIREWCGAGSEAVGELVGGKQIPDPFLQTLVRGEGNPSVLVSTPKAFLMAQERD--------PRRLCWNSWDLVVFDEVHHVLKEHPYRKIALSVASANAKRAPSEPRSRT-------QMVGLTASLSYSVSDAAIKRCIRTLMTEMQMDALCTATPEELLAGGYHSHAAAPEIALDDVHLEACPP-----------------------ADRKPHLMLETFWRRVEGKGCTEYAEDLLRAIKRREGALRR---------ERPSDFRSPLAEPELKMA--DWGVRMHKMA------------------------------------------------------QRFDREDPGVAGRFRELEQWYESLRILIISWEENREGSVLFLKMMLNDDERK-----ESAEFFHKHDRE----------DIYVRLTQLKKVLLDK--------TSVSNSSNADFCGIVFVQQRVTAHIIDFYLKRDRTLSARIKSAFLYAVSSPATPSLSLNKGTANSVLHDFRKGKLNLLVSTVVAEEGLDVPSANCVIRFDPVLNAVSHVQGRGRARQELSSFVVLQERKDRPTAMLQKVEEKQLRIASSFHTFSELSPEERVKVKTGEIEAQKNRETSAMSLL---GRKGEEEAYQDVLQYCAKTKAELGVTWDETDETDKFLCHCTYESETGSSVEGIGKGKQKKIAKKRAAWDLINKLKASVP 663
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Match: A0A2V3IZ19_9FLOR (Endoribonuclease Dicer-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ19_9FLOR) HSP 1 Score: 308 bits (788), Expect = 2.150e-88 Identity = 229/651 (35.18%), Postives = 323/651 (49.62%), Query Frame = 1
Query: 475 PTNQRAPASPVMTLRGYQSRIAQTCEDANTIVILPTGSGKTLIAAELIKRLHGGDETAAPALFLVPTCILVDQQANALRSWTGLVVAKYRGGMALPGFFNVLVSTPEAFKVAQRRNRAGTAYGTAALLDWGLFSAVIFDEVHHALKDHPYRKLALSLRQSSLSAGXXXXXXXXXXXXGTPRVVGLTASYSYAVGTAKTKASLTKMCEELLITKAETATRKELEASGYHATGAAAEVLLTPSCPPPLPEPSTSPAISAALKPRGVVPDADRKPHEMGVTFFRREARGTCTAFSRLLMVCVRSMEGAIVTAAAAQASPSQRHPRFASPLPPSGKLAPREWGAYAHKLAYSGGVLVGRARVSSTATSGIGXXXXXXXXXNGKTKKCTRCGNECATKAAGRERGQHQSSAPPDLHLQLAEMEHWYEAVKTLVVSWEEAEDEATTILEMFACTGSAKFRTSTQQREVWPAGVRQKISAFWAEVPDT-FPRYEHLKKVIMEKYDHHGGGGISSSGSGGTYFRGIVFVRQRMTTHALEHMIANDPRTASRFSTACLYASSSPATASLSVTKAQAQESIEAFRSGRVNLLLSTVVAEEGMDVPAANCVVRYDAMVHAVSMVQGRGRAREENSSFVVLDERSDRTTADLEAVERQQLQFV 2424
P++Q PA+ + R YQ RI NT+V+LPTG+GKTLIA E+I+ L + PALF+VPT +LV QQ+ A+ + T VA+ GG +LP ++V+V+TP F Q +AY + A W F +V+FDEVHHALK HPYR LALSL++ + PRVVGLTAS++YA+ + L +C E + +TA EL++ GYHA+ A + TPS PL A P V+P R+PH M TF R T ++ + V SME +V A RH R R+W K A + H L QL HWYEA++ L+V+WEE E A L+M C + +VWP + + +FW V F R LK+V++++ G++ FRGI+FV+QR+ TH +EH I +D + + C+YASS+ AT LSV+K++A E IEAFR+G +NLL++T VAEEGMD+PAANCV+R+D + VS VQGRGRAR E S+FVV+ E + +++A VE + ++ +
Sbjct: 2 PSSQAPPAARLRP-RPYQQRIIDQAVLKNTLVVLPTGAGKTLIATEVIRTL------SPPALFIVPTVLLVKQQSEAIAAHTNYKVAQLHGGKSLPHSWHVVVATPACFHATQ------SAYPSLA---WARFRSVVFDEVHHALKKHPYRTLALSLKRCKSAH---------------PRVVGLTASFTYALAQQRATNVLKTLCNEFQFSAVQTAPAHELKSGGYHASSAGS----TPSNVQPL----------ARTVPANVLPPQQRQPHLMLHTFLDRCEAKQATQTAQQIFQVVLSMES-VVHARDRSLDSQLRHVRNV-----------RKWSGNTFKRATA-----------------------------------------------------HNQQIMRTLLTQLC---HWYEALRLLIVTWEEDEFAAVWFLKMMKCNLNDAI-------QVWPEHCARHVRSFWYRVNTLQFDRLVCLKQVLLQQDAQRRADGVA--------FRGIIFVQQRVYTHMIEHYIESDQQLQAVLRCGCVYASSTSATPLLSVSKSKAAERIEAFRTGAINLLIATSVAEEGMDIPAANCVIRFDTVQSTVSFVQGRGRARLEGSAFVVMKESAAKSSARFAQVESEHMKLL 524 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig74.42.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.42.1 >prot_P-littoralis_Contig74.42.1 ID=prot_P-littoralis_Contig74.42.1|Name=mRNA_P-littoralis_Contig74.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=786bp MAMQPLSSDSVPAVVAAAPPTNQRAPASPVMTLRGYQSRIAQTCEDANTIback to top mRNA from alignment at P-littoralis_Contig74:186945..197192+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig74.42.1 ID=mRNA_P-littoralis_Contig74.42.1|Name=mRNA_P-littoralis_Contig74.42.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10248bp|location=Sequence derived from alignment at P-littoralis_Contig74:186945..197192+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig74:186945..197192+ >mRNA_P-littoralis_Contig74.42.1 ID=mRNA_P-littoralis_Contig74.42.1|Name=mRNA_P-littoralis_Contig74.42.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2358bp|location=Sequence derived from alignment at P-littoralis_Contig74:186945..197192+ (Pylaiella littoralis U1_48)back to top |