mRNA_P-littoralis_Contig1185.16.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1185.16.1
Unique NamemRNA_P-littoralis_Contig1185.16.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5KIQ7_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ7_9PHAE)

HSP 1 Score: 762 bits (1967), Expect = 1.040e-263
Identity = 367/536 (68.47%), Postives = 419/536 (78.17%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSG-GDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARRRAEADGDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDDVS---------LNACMRHTRCGAYCLKNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            YWK W G LEDTIDQLPSL+TFTTYSAADHH ADLY LMPR G EP++G G G+VRPIQERNRLLIANPHI DWW+WERMQVFKKYFL  DMA+A+W WDRAEWQSRS+LHVHGCSSW CEG+ER+T L+RTYL GHI R R   DG+    DGGV D++M+R    I++ L GIGFTALN +PP  P DP VPTSEEARARGR+EL +D+R F WDDV          +NACMRHTR G YCL NGRCRF  PK R+E L L+AHPLTTPPTDNVDDWQL+ATP+NALPR EG+E +G +DP VNRH+V QLLGWG+NVDFS IVD GM  RYMVKYT+KGE+RS DV+  L TLVRHAA+L+ ++D RLTLPSI+R+  N ATTRRDMGVQEVQHLNLQT +VL++VEYVR  TE TSVEV+     GGL PVR L+ AYS R++   W    GGRP QD  LE MNYCTFAATYKLTR+KKI  H R N V SFLP  +  PT P YADYCR  LVK+R W G +HNGWDG+E
Sbjct:   54 YWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIEDWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYVRVYTEQTSVEVESAGADGGLRPVRDLLLAYSRRMDQDAWVPIHGGRPQQDAVLEEMNYCTFAATYKLTREKKITTHTRNNRVVSFLPIFSHSPTSPKYADYCRSHLVKYRPWRGPLHNGWDGEE 589          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5KFJ0_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ0_9PHAE)

HSP 1 Score: 764 bits (1972), Expect = 8.150e-258
Identity = 368/536 (68.66%), Postives = 420/536 (78.36%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSG-GDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARRRAEADGDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDDVS---------LNACMRHTRCGAYCLKNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            YWK W G LEDTIDQLPSL+TFTTYSAADHH ADLY LMPR G EP++G G G+VRPIQERNRLLIANPHIADWW+WERMQVFKKYFL  DMA+A+W WDRAEWQSRS+LHVHGCSSW CEG+ER+T L+RTYL GHI R R   DG+    DGGV D++M+R    I++ L GIGFTALN +PP  P DP VPTSEEARARGR+EL +D+R F WDDV          +NACMRHTR G YCL NGRCRF  PK R+E L L+AHPLTTPPTDNVDDWQL+ATP+NALPR EG+E +G +DP VNRH+V QLLGWG+NVDFS IVD GM  RYMVKYT+KGE+RS DV+  L TLVRHAA+L+ ++D RLTLPSI+R+  N ATTRRDMGVQEVQHLNLQT +VL++VEYVR  TE TSVEV+     GGL PVR L+ AYS R++   W    GGRP QD  LE MNYCTFAATYKLTR+KKI  H R N V SFLP  +  PT P YADYCR  LVK+R W G +HNGWDG+E
Sbjct:  366 YWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMPRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQSRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSGDGEDPPGDGGVGDEDMSRVKDGISSFLCGIGFTALNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRSRDVQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYVRVYTEQTSVEVESAGADGGLRPVRDLLLAYSRRMDQDAWVPIHGGRPQQDAVLEEMNYCTFAATYKLTREKKITTHTRNNRVVSFLPIFSHSPTSPKYADYCRSHLVKYRPWRGPLHNGWDGEE 901          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5K692_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K692_9PHAE)

HSP 1 Score: 553 bits (1426), Expect = 3.210e-175
Identity = 287/539 (53.25%), Postives = 346/539 (64.19%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSGGDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARRRAEAD-----GDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDDVS---------LNACMRHTRCGAYCLKNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQ 2102
            YW  W G LED+++QL SLTTFTTYSAA+HH+ DL+ LMP  G EP  G  G +RP+ ER R LI NPH+ADWW+WERM    + FL   MADA+W W RAEWQSR+SLH+HG SSW CEGD R+T LSRTYL  +IARRR   +            GGV D E  R    I   L  +GFTA N   P+ P D T P  EEA AR REEL++ MRDFPW DV          +N   RHT+CG YCL+NGRCRF  PK R  R+ L  HPLT  PTD+ +D+ +V TP NA P AEG    G  +  VNRH+  QLL WGAN DFS IVD G    YMVKY SKGE  S + R+ L TLVR AA    +   RL+LP I+R+  N ATTRRDMG QEV H+NLQ   V  +VE+VRA T++T VEV+RG   GGL PV+GL++AY+ R+E + WA +G  RP  +  L  MN+  FAAT+K  R +KI  H RKN V +F P+ +   T P Y DYCR QLVK+R W G + NGW GQ
Sbjct:  504 YWMRWQGKLEDSLNQLQSLTTFTTYSAANHHWYDLFRLMPASGPEPAPGEGGLIRPVAERTRPLIDNPHLADWWIWERMHKLDEIFLGNAMADASWFWMRAEWQSRASLHIHGMSSWNCEGDRRVTELSRTYLRVYIARRRRATEEPDXXXXXXXXXGGVPD-EFVRVQEDIVRFLEKVGFTARN---PSLPADDT-PVGEEACARSREELERYMRDFPWHDVDECRRRYANLVNGAQRHTKCGPYCLRNGRCRFGFPKKRDGRMRLDPHPLTGNPTDDPNDYHVVVTPPNASPPAEGQRGPGPCNRSVNRHVQSQLLAWGANTDFSPIVDHGGAATYMVKYASKGECSSKEARKMLLTLVRDAADQLPDGPERLSLPQIMRKIINCATTRRDMGFQEVMHMNLQIPMVFKNVEFVRAATQNTDVEVERGAPEGGLRPVQGLLEAYARRMEESEWAPEGRNRP-SNAVLSAMNFFEFAATFKTHRQQKIVAHTRKNRVVTFQPYFSHSTTSPAYPDYCRNQLVKYRPWTGELSNGWGGQ 1036          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5KVL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL0_9PHAE)

HSP 1 Score: 413 bits (1062), Expect = 2.250e-133
Identity = 201/303 (66.34%), Postives = 233/303 (76.90%), Query Frame = 3
Query: 1197 MRHTRCGAYCLKNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            MRHTR G YCL NGRCRF  PK R+E L L+AHPLTTPPTDNVDDWQL+ATP+NALPR EG+E +G +DP VNRH+V QLLGWG+NVDFS IVD GM  RYMVKYT+KGE+R  D +  L TLVRHAA+L+ ++D RLTLPSI+R+  N ATTRRDMGVQEVQHLNLQT +VL++VEYVR  TE TSVEV+     GGL PVR L+ AYS R++   W    GG+P QD  LE +NYCTFAATYKLTR+K I  H R N V SFLP  +  PT P YADYCR  LVK+R W G +HNGWDG+E
Sbjct:    1 MRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREGEEGEGVFDPCVNRHVVAQLLGWGSNVDFSPIVDMGMAGRYMVKYTTKGESRGRDAQTTLATLVRHAATLDADDDDRLTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYVRVYTEQTSVEVESAGADGGLRPVRDLLLAYSRRMDQDAWVPIHGGKPQQDAVLEEINYCTFAATYKLTREK-ITTHTRNNRVVSFLPIFSHSPTSPKYADYCRSHLVKYRPWRGPLHNGWDGEE 302          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5KCP2_9PHAE (Helitron_like_N domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP2_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 3.370e-128
Identity = 207/353 (58.64%), Postives = 234/353 (66.29%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSG-GDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARRRAEADGDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDDVS--------------------------------------------------------------------LNACMRHTRCGAYCLKNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEG 1379
            YWK W G LEDTIDQLPSL+TFTTYSAADHH ADLY LM R G EP++G G G+VRPIQERNRLLIANPHIADWW+WERMQVFKKYFL  DMA+A+W WDRAEWQ RS+LHVHGCSSW CEG+ER+T L+RTYL GHI R R   DG+    DGGV D++M+R    I++ L GIGFTA+N +PP  P DP VPTSEEARARGR+EL +D+R F WDDV                                                                     +NACMRHTR G YCL NGRCRF  PK R+E L L+AHPLTTPPTDNVDDWQL+ATP+NALPR EG
Sbjct:  654 YWKKWEGKLEDTIDQLPSLSTFTTYSAADHHMADLYRLMLRAGPEPEAGVGAGDVRPIQERNRLLIANPHIADWWIWERMQVFKKYFLGKDMANASWHWDRAEWQIRSTLHVHGCSSWECEGEERVTELARTYLRGHIGRVRPSRDGEDPPGDGGVSDEDMSRVKDGISSFLCGIGFTAVNLEPPPTPADPQVPTSEEARARGRDELARDLRAFDWDDVGECERRYKNLVNACMRHIRHGGCCLVNGRCRFGFPKPRQXELAREELARDLRAFDWDDVGECERRYKNLVNACMRHTRHGGYCLVNGRCRFGFPKPRQESLGLEAHPLTTPPTDNVDDWQLIATPQNALPRREG 1006          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5KA18_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA18_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 8.950e-72
Identity = 139/256 (54.30%), Postives = 165/256 (64.45%), Query Frame = 3
Query: 1374 EGDEDDGEYDPFVNRHI-----------VVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEG-ENDARLTLPSILRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            + D+DD    P + R +           V +LLGWG+NVDFS IVD GM  RY              ++  L TLVRHAA+L+  ++D R TLPSI+R+  N ATTRRDMGVQEVQHLNLQT +VL++VEYVR  TE TSVEV+     GGL PVR L+ AYS R++   W    GGRP QD  LE MN CTFAATYKLTR+KKI  H R N V SFLP  +  PT P YADYCR  LVK+R W   +HNGWDG+E
Sbjct:   37 DADDDDRLTLPSIMRKVLNMATTRRDMGVQELLGWGSNVDFSPIVDMGMAGRY--------------IQTTLATLVRHAATLDAADDDDRHTLPSIMRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYVRVYTEQTSVEVESAGADGGLRPVRDLLLAYSRRMDQDAWVPIHGGRPQQDAVLEEMNNCTFAATYKLTREKKITTHIRNNRVVSFLPIFSHSPTSPKYADYCRSHLVKYRPWRDPLHNGWDGEE 278          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5K2R2_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R2_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.080e-61
Identity = 119/241 (49.38%), Postives = 150/241 (62.24%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSGGDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEG--DERMTALSRTYLEGHIARRRAEADG--DTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDD---------VSLNACMRHTR 1211
            +W+   G LE+ +DQL SLT FTTYSAADHH+ DL+ LMP  G + D   D +    Q+R + LI NPH+ADWW W+R+Q +K  FL  DM D  W WDRAEWQSR+SLHVHGCSSW  E   ++ +T LSR YL+G +ARRR +     + A  DGGV D+E AR   ++   L  +GFTA N DPP     P    SEE R    E + +DMRDFPW+D         + LNAC R+TR
Sbjct:  402 FWQKEQGRLENAVDQLQSLTVFTTYSAADHHWYDLHRLMP--GYKED---DDDKPTPQQRTQWLIDNPHLADWWFWQRLQEWKGVFLGRDMGDQRWQWDRAEWQSRASLHVHGCSSWIVEAVRNKHLTDLSRRYLKGFLARRRVKQGRLEEGAPTDGGVSDEEFARVQQEMCTFLVAVGFTARNPDPPA----PDEAVSEEQRRAAAEGIARDMRDFPWEDEQATMERYSLLLNACQRYTR 633          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A6H5K558_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K558_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 2.690e-47
Identity = 95/160 (59.38%), Postives = 109/160 (68.12%), Query Frame = 3
Query: 1626 LRRAFNTATTRRDMGVQEVQHLNLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            +R+  N ATTRRDMGVQEVQHLNLQT +VL++VEYVR  TE TSVEV+     GGL PVR L+ AYS R++   W    GGRP QD  LE MNYCTFAATYKLTR+K I  H R N V SF    +  PT P YADYC   LVK+    G +HNGWD +E
Sbjct:    1 MRKVLNMATTRRDMGVQEVQHLNLQTHNVLHNVEYVRVYTEQTSVEVESAGADGGLRPVRDLLLAYSRRMDQDAWVPIHGGRPQQDAVLEEMNYCTFAATYKLTREKNITTHIRSNRVVSFHAIFSHSPTSPKYADYCHSHLVKYCPLRGPLHNGWDSEE 160          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: A0A7D9HMH4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HMH4_PARCT)

HSP 1 Score: 166 bits (419), Expect = 9.470e-39
Identity = 143/541 (26.43%), Postives = 239/541 (44.18%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLMPRFGLEPDSGGDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARR-RAEAD-GDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARARGREELQKDMRDFPWDDVSLNACMRHTRCG-AYCLKNG------RCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQH--LNLQTCSVLNDVEYVRAN----TEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            YW      L+  I  + + T F T+S+AD H+ +L+ L   FG        GN    + R + +I NPHI DW+  +R++ F +++L  D   A W W R E+Q R S+H HG +      D  +  L++T L+G +A++ + E D  +T ++D   +D E  + AA           + +N +PP +  D  +        R   ++ +  +   + D+ LN   RHTRC  +YCL+        +CRF  P     +  L+   + T   DN      + T RN              D  +N H  +QL GW AN D  +++D      Y+ KY +KGE RS  +++   ++V++   ++   D R  +  ++ ++       RD   QE  H  L+L+  S    V  V  N      DT+  +  G           L+  Y+ R +               + +  MN+  FA TYK+  ++  K  +  N +    P  +  P  PN+A YC+ QL++++ W    +N W  QE
Sbjct:  814 YWNKVREELKAIITNVGAPTVFFTFSSADMHWPELHAL---FGANT-----GNAT-TEARRQNVINNPHIVDWFFTQRLEKFVQHWLY-DTLGAKWHWFRYEYQGRGSIHCHGTAK--LNNDPGLCQLTQTALKGFLAQKFKNENDCSETTELD---QDIEAGQKAADTVCQYVDWLLSTVNPNPPDE--DMWIRPEVHPCQRSHHDIPEHEKQSDYVDL-LNMVQRHTRCSTSYCLRKKSSETELKCRFHFPFDNCPKTKLEFEKVHTS-GDNEHYRAKIVTKRN--------------DSRLNNHQQLQLQGWRANCDIQVVIDHYACVEYLTKYAAKGEPRSPILKQAFNSIVQN---VDSNTDPRRVIKKVVMKSLG----ERDYAAQETMHHLLSLKLHSSSFKVMPVSLNGSRRVRDTA-SIDEGES----CTDYSLLDVYANREQY-----------DSSQNIINMNFVQFATTYKVVNNELTKLPE--NVIPRIFPTYSPNPKGPNFALYCKYQLLRYKPWRTTQNNAWGDQE 1296          
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 165 bits (418), Expect = 1.300e-38
Identity = 146/554 (26.35%), Postives = 237/554 (42.78%), Query Frame = 3
Query:  528 YWKTWGGNLEDTIDQLPSLTTFTTYSAADHHFADLYWLM-PRFGLEPDSGGDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLVADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIARRRAEAD--GDTADVDGG-VRDKEMARCAAKIAALLNGIGFTALNQDPPTQPGDPTVPTSEEARAR-GREELQKDMRDFP-WDDVS-----LNACMRHTRCG-AYCL------KNGRCRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDDGEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTDVRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQH----LNLQTCSV------LNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLESAPWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFLPFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE 2105
            YW     +L+  +  + + T F T+S+AD H+ +L+ L   R  LE  S         Q+R + +I NPHI DW+  +R++ F KY+L  D  DA W W R E+Q R S+H HG +    + D  +  L++  L+G++A++  + +   D+  ++   V   E A+ A K    L     + +N +PP           E    R      Q+  +D P WD  S     LN   RHTRC  +YCL      K  +CRF  P     +  ++   + +  +++      + T RN              D  +N +  +QL GW AN D  +++D      Y+ KY +KGE RS  +++   ++V +A S    + A       +++        RD   QE  H    L L + S       LN    VR N  + + EV              L+  Y+ R +               + +  MN+  FA T K+   K  K  +  N +    P  +  P  PN+A YC+ QL++++ W    +N W  +E
Sbjct:  959 YWHKVKEDLKAIVTSVGTPTFFFTFSSADMHWPELHCLFHDRADLELSS---------QDRRQNVICNPHIVDWFFTQRLESFVKYWLY-DTLDAKWHWYRFEYQGRGSIHCHGTAK--LKNDPGLCDLTKIALKGYLAQKFKDENVVEDSTQLNQDIVAGNEAAQTACKYVDWL----LSTMNPNPP----------DENMWIRPDMHPCQRQYKDIPEWDMDSDYVDLLNMVQRHTRCSTSYCLRKKSSEKELKCRFHFPYDHCTQTKIEFEKVHSKHSNDEQYRARIVTKRN--------------DSRLNNNQQLQLQGWRANCDIQVVIDHYACVEYLTKYAAKGEPRSPLIKQAFLSIVLNANSTSNPHKA-------IKKVVMKTLGERDYAAQETMHHLLSLKLHSSSFKVIPISLNGSRRVRINQSECNSEVS--------CTSNSLLDVYANREQY-----------DTTQQVLNMNFIQFATTLKVVNGKLEKLPE--NVIPRIFPTYSCNPKGPNFAKYCKYQLLRYKPWKINENNAWGSEE 1444          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1185.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KIQ7_9PHAE1.040e-26368.47ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KFJ0_9PHAE8.150e-25868.66ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K692_9PHAE3.210e-17553.25ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5KVL0_9PHAE2.250e-13366.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP2_9PHAE3.370e-12858.64Helitron_like_N domain-containing protein (Fragmen... [more]
A0A6H5KA18_9PHAE8.950e-7254.30ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K2R2_9PHAE1.080e-6149.38Helitron_like_N domain-containing protein n=1 Tax=... [more]
A0A6H5K558_9PHAE2.690e-4759.38ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A7D9HMH4_PARCT9.470e-3926.43ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
UPI00109BE5C81.300e-3826.35uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1185contigP-littoralis_Contig1185:36233..38363 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog5507.FOXG_17094P0
PFAMsHelitron_like_N,MULE,PIF1
Model size2105
Max annot lvl4751|Fungi
KEGG koko:K15255
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.6e-15
EggNOG OGsCOG0507@1|root,KOG0987@2759|Eukaryota,39RYU@33154|Opisthokonta,3P64X@4751|Fungi,3QU0F@4890|Ascomycota,21AWX@147550|Sordariomycetes,3TKC2@5125|Hypocreales,1FXW4@110618|Nectriaceae
EC3.6.4.12
DescriptionConserved hypothetical protein
Cds size1464
COG categoryD
BRITEko00000,ko01000,ko03029,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789497.9021413-UTR-P-littoralis_Contig1185:36232..368731680789497.9021413-UTR-P-littoralis_Contig1185:36232..36873Pylaiella littoralis U1_48UTRP-littoralis_Contig1185 36233..36873 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789497.9144719-CDS-P-littoralis_Contig1185:36873..374101680789497.9144719-CDS-P-littoralis_Contig1185:36873..37410Pylaiella littoralis U1_48CDSP-littoralis_Contig1185 36874..37410 +
1680789497.9262533-CDS-P-littoralis_Contig1185:37436..383631680789497.9262533-CDS-P-littoralis_Contig1185:37436..38363Pylaiella littoralis U1_48CDSP-littoralis_Contig1185 37437..38363 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1185.16.1prot_P-littoralis_Contig1185.16.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1185 36874..38363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1185.16.1

>prot_P-littoralis_Contig1185.16.1 ID=prot_P-littoralis_Contig1185.16.1|Name=mRNA_P-littoralis_Contig1185.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=488bp
MPRFGLEPDSGGDGNVRPIQERNRLLIANPHIADWWVWERMQVFKKYFLV
ADMADATWDWDRAEWQSRSSLHVHGCSSWACEGDERMTALSRTYLEGHIA
RRRAEADGDTADVDGGVRDKEMARCAAKIAALLNGIGFTALNQDPPTQPG
DPTVPTSEEARARGREELQKDMRDFPWDDVSLNACMRHTRCGAYCLKNGR
CRFALPKARRERLTLKAHPLTTPPTDNVDDWQLVATPRNALPRAEGDEDD
GEYDPFVNRHIVVQLLGWGANVDFSLIVDQGMPCRYMVKYTSKGEARSTD
VRRKLTTLVRHAASLEGENDARLTLPSILRRAFNTATTRRDMGVQEVQHL
NLQTCSVLNDVEYVRANTEDTSVEVQRGRGGGGLAPVRGLIQAYSVRLES
APWAADGGGRPPQDRGLEGMNYCTFAATYKLTRDKKIKRHDRKNGVASFL
PFSNSRPTHPNYADYCRRQLVKFRAWHGGMHNGWDGQE
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mRNA from alignment at P-littoralis_Contig1185:36233..38363+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1185.16.1 ID=mRNA_P-littoralis_Contig1185.16.1|Name=mRNA_P-littoralis_Contig1185.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2131bp|location=Sequence derived from alignment at P-littoralis_Contig1185:36233..38363+ (Pylaiella littoralis U1_48)
GCTCGTCCTGAGCGAGCCCCGAAGGAGTCCTTCATCCCCATGCCCGGCCG CGATGAAAGCGAGGCTGAACTACTGCGGCAGCAGTTGGAGGAGATGACAG GGTACACGCCCAACAGACGTAGCGACCTCCCGACCCTGCCATATCCGGGG CGAGACAGACCGGTTCGAGAAGACACGCCATGGCTATATCGCATGTGCTT CCCCGCCCTATTCCCCGATGACATTGGGGATCCTACCGCGCCAAGGGTTG GGGAGGTGCGAAACGTGGATGTCATAACCCACCTCATGAAGTTTGTGGAT CGGCCGAACGGGATGGCACCATATTATCGGTTCGCCAGCCACCGAACGTT CCGTTATTGGGCGCTGGACATGCGGTTGAGAACGGCGGCTCGAGGGCAGT GCCGCGTCTTCCTGCAAAACAACCCGGCCCTTACCAGTCTTGATCCCAGC GAAGTTAACGACGGCACAATTCAGCAGCTCATGAGTATCGCCACTCGGTA TGTGGCGAACGTCCCCGGGATAGATGGTATTGGAAGACGTGGGGGGGCAA TCTCGAGGACACCATCGATCAGCTGCCATCTCTTACGACTTTTACAACCT ACTCTGCGGCCGATCATCACTTCGCCGACCTGTATTGGCTCATGCCGCGG TTCGGACTGGAGCCCGATTCCGGCGGCGACGGCAATGTTCGACCTATCCA GGAGCGCAACCGCCTGCTCATCGCCAACCCTCACATCGCGGACTGGTGGG TTTGGGAAAGGATGCAGGTTTTTAAGAAGTACTTCCTGGTAGCCGACATG GCTGATGCTACCTGGGATTGGGACAGGGCGGAGTGGCAGAGCCGGTCGAG CCTTCATGTGCATGGGTGCAGCTCTTGGGCGTGCGAGGGGGATGAACGAA TGACGGCGCTCTCGCGCACGTACCTGGAGGGCCATATCGCCCGCCGGCGA GCGGAGGCGGATGGAGATACGGCAGACGTCGATGGGGGCGTCCGCGATAA AGAGATGGCTCGCTGTGCGGCAAAGATCGCCGCCTTGTTGAACGGCATCG GCTTTACCGCCCTCAATCAGGATCCGCCGACTCAGCCGGGAGATCCGACA GTGCCGACTTCCGAAGAAGCGCGGGCTCGCGGCAGGGAGGAGCTTCAAAA GGACATGCGCGATTTCCCTTGGGACGACGTGGAGCGTGCCAGCGCCGGTA CAAGGTCTCCTTGAACGCGTGCATGCGGCACACGAGGTGCGGTGCGTACT GCCTGAAGAACGGGCGCTGCCGGTTTGCGTTACCCAAGGCCCGCCGCGAG AGGTTAACCCTCAAGGCGCACCCGCTCACCACTCCTCCAACGGACAACGT CGACGATTGGCAGCTTGTCGCAACGCCGCGGAACGCTTTGCCCCGGGCGG AAGGGGATGAAGATGACGGAGAGTACGATCCGTTCGTAAACCGGCACATC GTGGTGCAGCTGCTAGGTTGGGGTGCGAACGTTGACTTCTCGCTGATCGT GGACCAGGGCATGCCCTGCAGATACATGGTCAAATACACGAGCAAGGGAG AGGCGCGCAGCACGGACGTGAGGAGGAAACTCACGACCCTTGTTCGACAC GCTGCTTCCCTTGAGGGGGAAAACGACGCGCGTCTGACCTTGCCTTCGAT CTTGCGCAGAGCCTTCAACACGGCGACGACGCGGCGAGACATGGGTGTGC AAGAGGTTCAGCACCTCAACCTGCAGACCTGTAGCGTCCTCAACGACGTC GAGTACGTCAGGGCAAACACTGAGGACACTTCCGTTGAAGTGCAGCGCGG GAGGGGCGGAGGGGGGCTTGCGCCCGTGCGGGGCCTGATCCAGGCTTATT CAGTTCGCTTGGAGAGCGCACCGTGGGCGGCGGACGGTGGAGGCCGGCCC CCGCAGGACAGGGGCCTCGAGGGCATGAACTACTGCACGTTCGCCGCCAC GTACAAGCTTACTCGTGACAAGAAGATCAAGCGTCACGATAGGAAGAACG GCGTTGCCTCCTTCCTACCGTTCTCCAACAGCAGGCCGACCCACCCCAAC TACGCCGACTACTGCCGCCGCCAGCTCGTCAAGTTCCGTGCGTGGCATGG TGGTATGCACAACGGGTGGGACGGCCAGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1185:36233..38363+

>mRNA_P-littoralis_Contig1185.16.1 ID=mRNA_P-littoralis_Contig1185.16.1|Name=mRNA_P-littoralis_Contig1185.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1464bp|location=Sequence derived from alignment at P-littoralis_Contig1185:36233..38363+ (Pylaiella littoralis U1_48)
ATGCCGCGGTTCGGACTGGAGCCCGATTCCGGCGGCGACGGCAATGTTCG
ACCTATCCAGGAGCGCAACCGCCTGCTCATCGCCAACCCTCACATCGCGG
ACTGGTGGGTTTGGGAAAGGATGCAGGTTTTTAAGAAGTACTTCCTGGTA
GCCGACATGGCTGATGCTACCTGGGATTGGGACAGGGCGGAGTGGCAGAG
CCGGTCGAGCCTTCATGTGCATGGGTGCAGCTCTTGGGCGTGCGAGGGGG
ATGAACGAATGACGGCGCTCTCGCGCACGTACCTGGAGGGCCATATCGCC
CGCCGGCGAGCGGAGGCGGATGGAGATACGGCAGACGTCGATGGGGGCGT
CCGCGATAAAGAGATGGCTCGCTGTGCGGCAAAGATCGCCGCCTTGTTGA
ACGGCATCGGCTTTACCGCCCTCAATCAGGATCCGCCGACTCAGCCGGGA
GATCCGACAGTGCCGACTTCCGAAGAAGCGCGGGCTCGCGGCAGGGAGGA
GCTTCAAAAGGACATGCGCGATTTCCCTTGGGACGACGTCTCCTTGAACG
CGTGCATGCGGCACACGAGGTGCGGTGCGTACTGCCTGAAGAACGGGCGC
TGCCGGTTTGCGTTACCCAAGGCCCGCCGCGAGAGGTTAACCCTCAAGGC
GCACCCGCTCACCACTCCTCCAACGGACAACGTCGACGATTGGCAGCTTG
TCGCAACGCCGCGGAACGCTTTGCCCCGGGCGGAAGGGGATGAAGATGAC
GGAGAGTACGATCCGTTCGTAAACCGGCACATCGTGGTGCAGCTGCTAGG
TTGGGGTGCGAACGTTGACTTCTCGCTGATCGTGGACCAGGGCATGCCCT
GCAGATACATGGTCAAATACACGAGCAAGGGAGAGGCGCGCAGCACGGAC
GTGAGGAGGAAACTCACGACCCTTGTTCGACACGCTGCTTCCCTTGAGGG
GGAAAACGACGCGCGTCTGACCTTGCCTTCGATCTTGCGCAGAGCCTTCA
ACACGGCGACGACGCGGCGAGACATGGGTGTGCAAGAGGTTCAGCACCTC
AACCTGCAGACCTGTAGCGTCCTCAACGACGTCGAGTACGTCAGGGCAAA
CACTGAGGACACTTCCGTTGAAGTGCAGCGCGGGAGGGGCGGAGGGGGGC
TTGCGCCCGTGCGGGGCCTGATCCAGGCTTATTCAGTTCGCTTGGAGAGC
GCACCGTGGGCGGCGGACGGTGGAGGCCGGCCCCCGCAGGACAGGGGCCT
CGAGGGCATGAACTACTGCACGTTCGCCGCCACGTACAAGCTTACTCGTG
ACAAGAAGATCAAGCGTCACGATAGGAAGAACGGCGTTGCCTCCTTCCTA
CCGTTCTCCAACAGCAGGCCGACCCACCCCAACTACGCCGACTACTGCCG
CCGCCAGCTCGTCAAGTTCCGTGCGTGGCATGGTGGTATGCACAACGGGT
GGGACGGCCAGGAG
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