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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1025 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 900 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791526.597777-UTR-P-littoralis_Contig74:180567..180634 | 1680791526.597777-UTR-P-littoralis_Contig74:180567..180634 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig74 180568..180634 - |
| 1680791526.634905-UTR-P-littoralis_Contig74:183515..183548 | 1680791526.634905-UTR-P-littoralis_Contig74:183515..183548 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig74 183516..183548 - |
| 1680791526.6450152-UTR-P-littoralis_Contig74:184411..184436 | 1680791526.6450152-UTR-P-littoralis_Contig74:184411..184436 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig74 184412..184436 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791526.6120622-CDS-P-littoralis_Contig74:180634..181383 | 1680791526.6120622-CDS-P-littoralis_Contig74:180634..181383 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig74 180635..181383 - |
| 1680791526.622776-CDS-P-littoralis_Contig74:183364..183515 | 1680791526.622776-CDS-P-littoralis_Contig74:183364..183515 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig74 183365..183515 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig74.39.2 >prot_P-littoralis_Contig74.39.2 ID=prot_P-littoralis_Contig74.39.2|Name=mRNA_P-littoralis_Contig74.39.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MEDVCASATVGGVSRCVRRDFTGVEDGRICHGRGNESGGAQPRDVSSLLE
GTATAHEYMRNALRSTKIEEAFVVKEKLRAPTDVQGPAIPPTEPRLLSAP
SNFTFPVQTVEFEGRSGQRAPRGGGCCWRYYPSAHKWERALRYVWPQDAI
LDIWVVQAPLRSLVISSRVERRRYGIEGVKACQEIWWGAESGSLRLAPST
PLLCKESARRLRAIKVSFHELHTSKKVCCVFDHTKEYVCESNATKNIFCE
SFRWTVSWAHANILPGCNRQVQQQCKLSYIVVFLQENVPYFDPRSLLHI* back to topmRNA from alignment at P-littoralis_Contig74:180568..184436- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig74.39.2 ID=mRNA_P-littoralis_Contig74.39.2|Name=mRNA_P-littoralis_Contig74.39.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3869bp|location=Sequence derived from alignment at P-littoralis_Contig74:180568..184436- (Pylaiella littoralis U1_48)
CTCGGGGTCACAAAGCAGGAGCAAGGTCACACAGAAGTTTTTTCTTGTTG
TGCAGCAGTAGTTTTATCATATCCTACTACGCTGCATACAACTGTACTGC
CATAATGTATAACGTGATGCAGCACCGATTTGAAATAGATCCTGAGCTTT
TCTGTTGCTCACACTTCGTCGACTACCAAGCGAGCCGTCTGGGTAAGAGT
GTTCGGACATGACTTCCAGACTGTACAGACTGAAGTGTTTGGTGCGGGAC
TGATCGATCGTATATCATACGGTACCTGCACTTCACGTTGGTGTTGTGTG
TGTGTGTTGTCATCCCTTTAATTGGACGCCACTCTACACCTTTCGGGTAG
GTAGACGCTCCAACCGGGGTCGCACAGTAGGAAGTCAACACAGGAGTTTT
TTCTTTCTTTATTTTATTTTTCTTTCTCCACTTCCCACTGCGGTACTTGC
CTTCATTTTTTCTCGCGAGAAAGGGTACAGCCATCCCTATCCCTCGTCGA
CACTTCGAATTTTGTTTACTCACGAATTAATCGATTTCCACCCTCACGCA
TGACATGAGAAGAATTCCGGATCGTGTCACTGCACCGGGATTCGAACTCA
AGCGTAAGTGTAAGAAGATTCCGAGGATAATCAACTGGACGACCGGGGCG
ACCGGAAAAAGTACACACGTATTTTAAGCCTAGCTGTCATGGTCTTTGAA
GGAAAGTACCGAAATCGTGTGTTGAGGTGAAGGTTGCCGGAAAGCATCAT
CGCCATGTTTACGCTGGCAGCAACACCATCCATATGCTGCTTCTCCGTAC
TCCTATTGGTGTGGTGGCTGCTAGTTTGTGTCATTCCTACACTTCCTGGC
CCACGCTTTTGTGGCGCCCTCTTCCGTTGCTTCGTCAGAACGGCCGTCGA
GCGCACCAAGCATGGTGACATATGGAGGACGTTTGCGCGTCGGCGACCGT
TGGCGGTGTCTCTCGTTGCGTTCGACGGGATTTCACTGGAGTAGAAGACG
GCCGTATCTGCCATGGGAGAGGAAACGAGTCCGGTGGCGCCCAACCTCGG
GATGTCAGCAGTCTTCTTGAAGGTGTGCCGGAAAAAGTGAGAATTTCAGA
TCAGATAGCGCCGCCACTTTAGAGTGTGGCAGCTGAAAGCTTGAGGGTCC
GGTTGCTCCTAACACCTGTTGTATACGGTAGTATCTTCTGTCGGAGCGCC
GAGGGGGGTTTCGCGGAAATTTGCGGCGGGCAAAGATCACCTCGGGGCTA
AAAACTGAAAGGCGGACCGAGAGTCTCCGGGGGCGTTGTTCCGAACAACT
TGTCGTCAAACCCTGAGACACACCACAACACACACCTCTCAATTCCGCCA
TGTCGGGCCTGCGTGCTGTAGCGTCTACGAGAGAGTATTGAAGAAGCAGC
AGGAGGACAAAAAAAACCAGCTGGAGCGGCTTCCGTCTTCCGCCGGGTAG
CTGCGATGACACGTCCTGCCACAGCAGAACTACGTCATGGATAATTATAA
AAACGTGGTACAGCGAATTCGGATTAGGCTCTTTCCAATCACCTCGCTTG
ATTACAACAAACGTTTGATTGGATTCACTGAAAAGAGAAAAAGTATTTCC
GCGTTTCTAATCGTCTTGGCTATGATGCTTTTTCGTGAGAAATTCGAACA
AACTACACTTCACAACACAGGGCACCAACGGAGCTTGGAGACCTCCCAAG
TCCTGATTCTTTCGAAACAGAAGTCTCCGTGATGGTGGCCCTCGATACCG
CCACCGCTAAGCAGTTGTCACAGGTTGTGTGAGGAGAAAAGAGGGTCGCA
AGGAGAGGGTGTGTGTTGTTGATGCGACCCCAAATTGAGAAGGTGATGTT
TTTTGGTGCCAATCACAAACAATAATTCACGGCATCAGACAGCATCCGAG
CTACAAAGCCCCCGAAGTCCCGATTCTTTCGAAGCAGAGGTCTACGTGAT
AGTGACCCTCGACAGCGCTCCCGCTACAAGGTTGTCACGGCTCGGTCGCT
GGCTTAAAAAGAGTTGCCAGAAGAGGGTGTAGGTTGGTGCAGCAAGAAAA
AAGAGGCAGACAAGCGGTGAAATAAAGGATTCCGATTCATGTGGTCGCTG
CTGCTGTATATTTTCACCACACGTATCGCCACACCTGATGGAATGCGCAG
ACCAGGGGTGGATTTGCTTGCCATAGTGTTTGTCTTTGGTGCCCTGATCT
TTCTTTGCCTGTCTACTCCGCTGTTGCTGCTGATGGGCGAGGTAGGTGTG
TAATAGGTATGTTTGAAAAAAAAACCACGATTGTTGTAATTGAATATCCC
ACGATTTTTTGGCGGCGTTCAATTCCCACGATCGTTGTAAGAAAGCCTCC
ATAGTGTCCGACATTACAACGTTTGTTGTAGAATTACAACAAACGTTGTA
ATTTCCCGAGGTGATTGGAAAGAGCCTTACTTTTTGTGGCATTCTACACA
AAAAGTGCCACTGGCGTCGCGTGCCTTCCCGTGAAGTAGTATTGATGCTG
ACAGGATGTTTCCTCCAATACTAGCCGACGCACGTGGCTGACTGCAGCTA
CGAGCGAGCCTAAGCACAACTTTTTTACGCCCTGCTTTTGCTGTTGTGAA
GCAGAACAACACACCCCACCCAAGCAACAAAAATAACAATACAGCAACAA
CAATTATAGCCGTAGCAGTAAATGGCAATTGCCGAAAGTGTTACGGTACA
GTAAACACTTCTTTGTTTGCCCCCCGGTAGGCGGGCGCAAGTTGTTTGCG
AAAGATCGCCCCCGGGGATAAACAAGACGTTGGAGGGGAGGCTTTGGCCT
ATTATGTTTGTTTGGTATACATTAGGAACTCAAGCACAAATATATCACGC
TCGATTAAACCTACACTAAACCTACGTGTGATGGCTTTTGGTATCCCGCA
GAGGCAATACAAAACCAGGGGTTGCGTCAAGTACAAACCTTCACGAGATC
AACCATTCGTGCGTTTGGCTCACTTCAAATAAATATGGGATCTCTCTACA
GATAATGAGCCCGACTATGCTTACCCAACGCCCCTGCGATGCTGCTGTGA
CAGGCACCGCCACCGCGCATGAATACATGAGGAACGCTTTGCGATCTACT
AAAATAGAGGAAGCGTTCGTCGTCAAGGAGAAACTTCGTGCTCCGACGGA
CGTGCAAGGCCCCGCAATTCCCCCGACAGAGCCTAGATTACTCTCTGCTC
CTTCAAACTTCACGTTTCCTGTCCAAACAGTTGAGTTTGAAGGGAGAAGT
GGCCAGAGGGCACCGCGGGGTGGTGGATGCTGCTGGCGTTACTACCCCAG
CGCACACAAGTGGGAACGAGCGCTGCGGTACGTGTGGCCGCAAGATGCGA
TACTGGATATCTGGGTCGTTCAAGCGCCGTTACGTTCACTTGTGATCAGC
TCCAGGGTTGAACGGCGCCGGTACGGCATCGAAGGCGTCAAGGCTTGTCA
GGAAATTTGGTGGGGTGCGGAAAGTGGAAGTCTGCGGCTCGCGCCTTCAA
CACCTTTGTTGTGTAAAGAGAGCGCAAGAAGGCTACGTGCAATCAAGGTT
TCCTTTCATGAGTTGCATACGAGTAAGAAAGTGTGCTGTGTGTTTGATCA
CACTAAGGAGTACGTATGCGAATCCAATGCAACGAAGAATATATTCTGTG
AAAGCTTCCGTTGGACCGTTTCATGGGCGCACGCAAATATTTTACCAGGT
TGTAACCGCCAGGTACAGCAGCAGTGCAAATTATCATACATCGTAGTTTT
TTTACAAGAAAACGTTCCGTACTTTGACCCTCGCTCTCTTCTCCACATTT
GAATTTTTTGGCTTCCGGAAACACACGTGAAGGAAAAGCGAACGTTTTGC
GCTACATGCTGCGCTACAT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig74:180568..184436- >mRNA_P-littoralis_Contig74.39.2 ID=mRNA_P-littoralis_Contig74.39.2|Name=mRNA_P-littoralis_Contig74.39.2|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig74:180568..184436- (Pylaiella littoralis U1_48)
ATGGAGGACGTTTGCGCGTCGGCGACCGTTGGCGGTGTCTCTCGTTGCGT
TCGACGGGATTTCACTGGAGTAGAAGACGGCCGTATCTGCCATGGGAGAG
GAAACGAGTCCGGTGGCGCCCAACCTCGGGATGTCAGCAGTCTTCTTGAA
GGCACCGCCACCGCGCATGAATACATGAGGAACGCTTTGCGATCTACTAA
AATAGAGGAAGCGTTCGTCGTCAAGGAGAAACTTCGTGCTCCGACGGACG
TGCAAGGCCCCGCAATTCCCCCGACAGAGCCTAGATTACTCTCTGCTCCT
TCAAACTTCACGTTTCCTGTCCAAACAGTTGAGTTTGAAGGGAGAAGTGG
CCAGAGGGCACCGCGGGGTGGTGGATGCTGCTGGCGTTACTACCCCAGCG
CACACAAGTGGGAACGAGCGCTGCGGTACGTGTGGCCGCAAGATGCGATA
CTGGATATCTGGGTCGTTCAAGCGCCGTTACGTTCACTTGTGATCAGCTC
CAGGGTTGAACGGCGCCGGTACGGCATCGAAGGCGTCAAGGCTTGTCAGG
AAATTTGGTGGGGTGCGGAAAGTGGAAGTCTGCGGCTCGCGCCTTCAACA
CCTTTGTTGTGTAAAGAGAGCGCAAGAAGGCTACGTGCAATCAAGGTTTC
CTTTCATGAGTTGCATACGAGTAAGAAAGTGTGCTGTGTGTTTGATCACA
CTAAGGAGTACGTATGCGAATCCAATGCAACGAAGAATATATTCTGTGAA
AGCTTCCGTTGGACCGTTTCATGGGCGCACGCAAATATTTTACCAGGTTG
TAACCGCCAGGTACAGCAGCAGTGCAAATTATCATACATCGTAGTTTTTT
TACAAGAAAACGTTCCGTACTTTGACCCTCGCTCTCTTCTCCACATTTGA back to top
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