prot_P-littoralis_Contig739.21.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig739.21.2
Unique Nameprot_P-littoralis_Contig739.21.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length319
Homology
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.740e-59
Identity = 109/261 (41.76%), Postives = 149/261 (57.09%), Query Frame = 0
Query:   61 TFFNFMFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPEGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHP--DGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            T F+ MFP   + L V +TN Y   CTT       D R+     K  T G  + PE       +Y ++GI +T+GL +   +  HW  S + D+ LVR+ M+RD+F L+Y RF H +   +P R    D + +  +D+ WHIR  E +LN  W+      QW+ +DEQMV  V   A +++R+ PKKPI +G+KL+A+    GYCF S  DGG  GDPKLR W  CPLGRT R VL VL GAC    +++  SG Y+AMDN
Sbjct:  638 TCFDMMFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDN 898          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5L3T1_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T1_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 3.050e-55
Identity = 101/197 (51.27%), Postives = 137/197 (69.54%), Query Frame = 0
Query:    5 RGTGKTFADFLHKKETDGCPKSFRPSKSTLDSDEYPSFDPSKLGRFKSAQLGQLAFTFFNFMFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPEGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIR 201
            RG G  + D   K+E +G   SF+PSK TLD+   P+FDP KLGRF   +LG+LAFTFF+ MFP AV+ LLV++TN+YF FC +T        +E RH+ ++   G++SWP+ GIT +MM  VI I+LT+GLV+LP + +HW    +HD+KLVR  + RDMFLLIY RFFHMA + +P+R   G+ + GWD+L HIR
Sbjct:  441 RGDGHQYYDCHRKREGEGEDVSFKPSKKTLDA--LPAFDPDKLGRFSVDELGELAFTFFSIMFPAAVILLLVRKTNEYFNFCRSTKNPKG---QEQRHRDQKARKGKSSWPKKGITKSMMQGVISIILTIGLVQLPAMHDHWSCHSFHDYKLVRACLPRDMFLLIYGRFFHMASSGAPERLQGGTTEPGWDSLHHIR 632          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5JFU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU5_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 4.080e-53
Identity = 100/197 (50.76%), Postives = 134/197 (68.02%), Query Frame = 0
Query:    5 RGTGKTFADFLHKKETDGCPKSFRPSKSTLDSDEYPSFDPSKLGRFKSAQLGQLAFTFFNFMFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPEGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIR 201
            RG G  + D   K+E +G   SF+PSK T+ +   P+FDP KLGRF   +LG+LAFTFF+ MFP AV+ LLV++T +YF FC +T    E   +E RH+ K+   G++SWP+ GIT  MM  VIGI+L +GLV+LP + +HW    +HD+KLVR  + RDM LLIY RFFHMA + +PKR  DG+ + GW +L HIR
Sbjct:  647 RGDGHQYYDCHRKREGEGEDVSFKPSKKTIGA--LPAFDPDKLGRFSVDELGELAFTFFSIMFPAAVILLLVRKTYEYFNFCRSTKNPKE---QEQRHRDKKARKGKSSWPKKGITKRMMQGVIGIILAIGLVQLPAVHDHWSCHSFHDYKLVRACLPRDMSLLIYGRFFHMASSGAPKRLQDGTTEPGWGSLHHIR 838          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KMJ3_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ3_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 1.950e-47
Identity = 82/194 (42.27%), Postives = 117/194 (60.31%), Query Frame = 0
Query:  127 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRH-PDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            +IGI +T+GL +   +  HW  S + ++ LV++ M RD+F L+Y RF H +   +P+R  PDG  +  +D+ WHIR  E +LN  W+       W+S+DEQM+  V + +  +  Y P KPIK+G+KL A    + Y   S  DGG  GDPKLR +  CPLGRT R VL VL G C  L +++  SG ++AMDN
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITSYSLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGLFIAMDN 226          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KPD8_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 2.470e-46
Identity = 84/204 (41.18%), Postives = 111/204 (54.41%), Query Frame = 0
Query:  116 EGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            E G     +Y+V G              +H  V  + ++ +VR  M RD+F+L Y RFFH+APA       D  YD       HIR  E +LN+ WS     G W+S+DEQMV    R    ++RY   KPIK+G+K WA+ C SGY F    DGGF GD KLR +A CPLGR+ R V++VL  AC   + +++  G  VAMDN
Sbjct:   26 EYGFERKHLYSVTGXXXXXXXXXXXXXXDHCGVEAHDNYPMVRACMPRDLFVLFYGRFFHLAPATGKLNKDDPKYD----CKHHIRKLEDVLNKCWSELVEPGAWLSYDEQMVKSTARVMLALMRYNKAKPIKHGIKCWAICCPSGYSFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDN 225          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 6.150e-43
Identity = 79/177 (44.63%), Postives = 110/177 (62.15%), Query Frame = 0
Query:  145 HWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHP--DGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            HW  S + D+ LVR+ M+RD+F L+YSRF H +   +P R    D + +  +D+ WHIR  E +LN  W+      +W+ +DEQM+  V   A +++R  PK+PI +G+KL+A+    GYCF S  DGG  GDPKLR W  CPLGRT R VL VL GAC    +++  SG ++AM N
Sbjct:  668 HWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVHIAMSN 844          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.390e-40
Identity = 78/194 (40.21%), Postives = 112/194 (57.73%), Query Frame = 0
Query:  127 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRH-PDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            +IGI +T+GL +   +  HW  S + ++ LV++ M+RD+F L+Y RF H +   +P+R  PDG  +  +D+  HIR  E +LN  W+     G W+S+DEQM+  V +              + G+KL A    +GYC  S  DGG  GDPKLR +  CPLGRT R VL VL G C  L +++  SG ++AMDN
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMIKTVSK-------------YEQGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDN 213          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 2.030e-39
Identity = 73/158 (46.20%), Postives = 94/158 (59.49%), Query Frame = 0
Query:  162 TRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            T ++F+L Y RFF++APA       D  YD       HIR  E + N+ WS     G W+S+DEQMV    R    ++RY   KPIKNG+K WA+ C SGYCF    DGGF GD KLR +A CPLGR+ R V++VL  AC   + +++  G  VAMDN
Sbjct:    6 TTNLFVLFYGRFFNLAPATGKLNKDDPQYD----CKHHIRKLEDVFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDN 159          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.750e-32
Identity = 61/119 (51.26%), Postives = 76/119 (63.87%), Query Frame = 0
Query:  201 RAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            R  E +LNE WS     G W+S+DEQMV    R    ++R+   KPIK G+K WA+ C SGYCF    DGGF GD KLR  A CPLGR+ R VL+VL  ACP  +++++ SG  VAMDN
Sbjct:    3 RELEDLLNECWSKLVEPGAWLSYDEQMVKSTARAMFALMRFNKTKPIKTGIKGWAICCPSGYCFVQSIDGGFSGDIKLRPHATCPLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDN 121          
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Match: A0A6H5KJJ0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ0_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 9.530e-31
Identity = 72/196 (36.73%), Postives = 107/196 (54.59%), Query Frame = 0
Query:  127 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRA---FETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDN 319
            +IGI +T+GL +   +  +W  S + ++ LV++ M+  + L  + R    +      R  + S       L+H+RA    E +LN  W+       W+S+DEQM+  V + +  +  Y P KPIK+G+KL A    +GYC  S  DGG  GDPKLR +  CPLGR  R VL VL G C  L +++  SG ++AMDN
Sbjct:   33 MIGIFITIGLTKKVRMQKNWSRSAHDNYPLVQKCMSVLLQLGWWGRDRRGSKGTGAPRKVEDS-PPSTAPLFHVRAVWELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRATRHVLHVLLGECGVLRQKIDGSGVFIAMDN 227          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig739.21.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW40_9PHAE1.740e-5941.76HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5L3T1_9PHAE3.050e-5551.27DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JFU5_9PHAE4.080e-5350.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMJ3_9PHAE1.950e-4742.27DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KPD8_9PHAE2.470e-4641.18DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJP9_9PHAE6.150e-4344.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCC7_9PHAE8.390e-4040.21DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KQZ5_9PHAE2.030e-3946.20DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KG44_9PHAE1.750e-3251.26DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KJJ0_9PHAE9.530e-3136.73DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 61..267
e-value: 3.1E-18
score: 66.3
NoneNo IPR availablePANTHERPTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4coord: 59..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig739contigP-littoralis_Contig739:110194..112453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig739.21.2mRNA_P-littoralis_Contig739.21.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig739 110194..112453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig739.21.2 ID=prot_P-littoralis_Contig739.21.2|Name=mRNA_P-littoralis_Contig739.21.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=319bp
GRRDRGTGKTFADFLHKKETDGCPKSFRPSKSTLDSDEYPSFDPSKLGRF
KSAQLGQLAFTFFNFMFPMAVVALLVKETNDYFTFCTTTPTRNEDDKRED
RHKAKEPTNGRASWPEGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSD
YHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHI
RAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNG
LKLWAVACFSGYCFASYTDGGFVGDPKLRKWAGCPLGRTCRMVLFVLFGA
CPNLAEQLLQSGTYVAMDN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD