prot_P-littoralis_Contig1185.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1185.6.1
Unique Nameprot_P-littoralis_Contig1185.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length177
Homology
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BLAST of mRNA_P-littoralis_Contig1185.6.1 vs. uniprot
Match: A0A6H5KCN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN5_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.740e-32
Identity = 62/108 (57.41%), Postives = 72/108 (66.67%), Query Frame = 0 
Query:    2 AQRTLENSPDALVGDDR--WASANVRGFLKSPNGCVSGVLGLRGHDDVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKE 107
            A R LE  P  L   DR  W  A+VRG L  PNG VSGV+GL G +DVLWSR+C G AT   G  GV RC+ CKDFYRR +T RT  AAKHTP + TR+ +MST QK+
Sbjct:   33 ALRILEKVPAILQPHDRDRWQHADVRGVLAGPNGHVSGVMGLVGREDVLWSRKCTGFATPSYGRTGVPRCTHCKDFYRRGMTPRTAHAAKHTPAKKTRVSEMSTAQKD 140
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BLAST of mRNA_P-littoralis_Contig1185.6.1 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.530e-11
Identity = 40/94 (42.55%), Postives = 53/94 (56.38%), Query Frame = 0 
Query:   15 GDD-RWASANVRGFLKSPNGCVSGVLGLRGHDDVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKE 107
            GD+ RW    V G L    G VSG+L       VLWS+ C  +A+N   S GVARC ECK+F+R+SV +   Q  K  P  +T+   +ST QK+
Sbjct:    4 GDEGRWERGAVAGCLAGTKG-VSGILVRVADKAVLWSKACGWLASNHGESGGVARCGECKEFFRKSVQKLLAQTVKSDPHSNTKTESLSTVQKK 96
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1185.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KCN5_9PHAE1.740e-3257.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM8_ECTSI4.530e-1142.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1185contigP-littoralis_Contig1185:9880..10589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1185.6.1mRNA_P-littoralis_Contig1185.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1185 9876..10589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1185.6.1 ID=prot_P-littoralis_Contig1185.6.1|Name=mRNA_P-littoralis_Contig1185.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp
MAQRTLENSPDALVGDDRWASANVRGFLKSPNGCVSGVLGLRGHDDVLWS
RRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGD
MSTGQKERTIHLINRDRKKKAAEIARLREELHVARKDFVKFNKKQGEALH
ELFMDPKSKEVLCTKLPKDSAERAIYE
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