mRNA_P-littoralis_Contig738.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.5.1
Unique NamemRNA_P-littoralis_Contig738.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: D7FY40_ECTSI (GTP cyclohydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY40_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 1.500e-129
Identity = 209/257 (81.32%), Postives = 224/257 (87.16%), Query Frame = 1 
Query:  151 MLAAPNGAASSSSSXXXXXXXXXXXXXXXXXXKGAFVPATGAAGPGMKRRRSVPDKQAEEKRRALADDDEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLIGLER 921
            ML A N A S++  XXX               KGA V     AGPG+KRRRS PD +AEE RRALADDDEGRLDKMQKAC+TLLECLGEDV+REGLVKTP RMA+ALLACTRGYSQSLS IVNEAVFEEDHHEMILVKDIE+HSLCEHHMVPFTGKVHIAYIPRSK+IGLSKLARIADMY+RRLQVQERLTRQIAEAIREA++PLGVGVV+EA+HMCMVMRGVQKQGA TMTSSVNGCFQADSRTRAEFFSLIGL+R
Sbjct:    1 MLPANNAATSTAXXXXXPRNGAAGPAASPSKGKGA-VNGAAEAGPGLKRRRSAPDVRAEEMRRALADDDEGRLDKMQKACSTLLECLGEDVSREGLVKTPSRMAKALLACTRGYSQSLSDIVNEAVFEEDHHEMILVKDIEIHSLCEHHMVPFTGKVHIAYIPRSKIIGLSKLARIADMYARRLQVQERLTRQIAEAIREAVDPLGVGVVVEASHMCMVMRGVQKQGATTMTSSVNGCFQADSRTRAEFFSLIGLDR 256
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A835YJ24_9STRA (GTP cyclohydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ24_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.670e-89
Identity = 143/195 (73.33%), Postives = 166/195 (85.13%), Query Frame = 1 
Query:  337 RALADDDEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLIGLER 921
            R  +  +E RL  M  A +TLL C+GED TREGLV+TP RMA ALL CT+GY + L  ++N A+FEE HHEMILVKDI+++S+CEHH+VPF G+ HIAYIPRSKV+GLSKLARIADMY++RLQVQERLT+QIAEAI EAINPLGVGVV+EATHMCMVMRGVQK GA T+TSSV GCFQAD RTRAEFFSLIGL +
Sbjct:   46 RRSSQTEEERLATMTAAVSTLLTCMGEDPTREGLVRTPYRMARALLDCTKGYEKRLDDVINGAIFEEHHHEMILVKDIDVYSMCEHHLVPFYGRAHIAYIPRSKVLGLSKLARIADMYAQRLQVQERLTKQIAEAIYEAINPLGVGVVVEATHMCMVMRGVQKSGATTVTSSVLGCFQADPRTRAEFFSLIGLSK 240
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A0P1B1V7_PLAHL (GTP cyclohydrolase 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B1V7_PLAHL)

HSP 1 Score: 267 bits (682), Expect = 1.490e-81
Identity = 132/186 (70.97%), Postives = 160/186 (86.02%), Query Frame = 1 
Query:  352 DDEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            DD+ +L+KM  A TTLLEC+GED  REGLVKTP RMA+ALL  T+GYSQSL+ ++NEAVFEEDH EM++V+DI+++S+CEHHMVPFTGKVHI YIP  KV+GLSKLAR+++++SRRLQVQERLT+QIA AI   I P GV VVIEATHMCMVMRGV+K GA T+TSSV G F++DSRTR+EF SLI
Sbjct:   58 DDKAKLEKMAAAVTTLLECIGEDPHREGLVKTPMRMAKALLYNTKGYSQSLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIATAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDSRTRSEFMSLI 243
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: D0NDK8_PHYIT (GTP cyclohydrolase 1 n=13 Tax=Phytophthora TaxID=4783 RepID=D0NDK8_PHYIT)

HSP 1 Score: 263 bits (672), Expect = 4.510e-80
Identity = 130/186 (69.89%), Postives = 158/186 (84.95%), Query Frame = 1 
Query:  352 DDEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            +D+ +L+KM  A TTLLEC+GED  REGLVKTP RMA+ALL  T+GY QSLS ++NEAVFEEDH EM++V+DI+++S+CEHHMVPFTGKVHI YIP  KV+GLSKLAR+++++SRRLQVQERLT+QIA AI   I P GV VVIEATHMCMVMRGV+K GA T+TSSV G F++D RTR+EF SLI
Sbjct:   58 EDKEKLEKMAAAVTTLLECIGEDPQREGLVKTPMRMAKALLYNTKGYGQSLSDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 243
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: F0WAZ1_9STRA (GTP cyclohydrolase 1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAZ1_9STRA)

HSP 1 Score: 262 bits (670), Expect = 1.510e-79
Identity = 129/182 (70.88%), Postives = 156/182 (85.71%), Query Frame = 1 
Query:  364 RLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            +L+KM  A  TLLEC+GEDV REGL KTP RMA+ALL  T+GYSQSLS ++N+AVFEEDH EM++V+DI+++SLCEHH+VPF GKVHI YIP  KV+GLSKLAR++D+++RRLQVQERLT+QIA+AI   I P GVGVVIEATHMCMVMRGV+K GA T+TSSV GCF+ D RTR+EF SLI
Sbjct:   78 KLNKMADAVKTLLECMGEDVEREGLRKTPLRMAKALLYNTKGYSQSLSQVLNQAVFEEDHDEMVIVRDIDLYSLCEHHVVPFIGKVHIGYIPNGKVLGLSKLARVSDVFARRLQVQERLTKQIAQAIMGVIQPRGVGVVIEATHMCMVMRGVEKSGASTVTSSVLGCFKTDPRTRSEFMSLI 259
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: H3G797_PHYRM (GTP cyclohydrolase 1 n=2 Tax=Phytophthora TaxID=4783 RepID=H3G797_PHYRM)

HSP 1 Score: 259 bits (663), Expect = 2.300e-79
Identity = 129/185 (69.73%), Postives = 155/185 (83.78%), Query Frame = 1 
Query:  355 DEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            D+ +L KM  A TTLLEC+GED  REGLVKTP RMA+ALL  T+GY QSL  ++NEAVFEEDH EM++V+DI+++S+CEHHMVPFTGKVHI YIP  KV+GLSKLAR+++++SRRLQVQERLT+QIA AI   I P GV VVIEATHMCMVMRGV+K GA T+TSSV G F++D RTR+EF SLI
Sbjct:   19 DQEKLKKMAAAVTTLLECIGEDPRREGLVKTPMRMAKALLYNTKGYGQSLRDVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFSRRLQVQERLTKQIATAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 203
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A6U4KYV2_9STRA (GTP cyclohydrolase 1 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KYV2_9STRA)

HSP 1 Score: 260 bits (664), Expect = 2.530e-79
Identity = 125/187 (66.84%), Postives = 157/187 (83.96%), Query Frame = 1 
Query:  355 DEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLIGL 915
            +E R+ +M  A  T+LEC+GED  REGL KTP R A+A+    +GY+Q+L+ +V +AVF E H EM+LVKDI+++SLCEHH+VPFTGKVHIAYIPR+ V+GLSKLAR+A+MY+RRLQVQERLT QI +A++EA+NPLGVGVV+E  H CM MRGVQK GA T+TSSV GCFQ+D+RTRAEFFSL+GL
Sbjct:   26 EEERMKRMAGAFRTILECVGEDPDREGLAKTPMRAAKAMKFFCKGYNQTLADVVGDAVFHEGHSEMVLVKDIDLYSLCEHHLVPFTGKVHIAYIPRADVVGLSKLARVAEMYARRLQVQERLTYQICQAVQEAVNPLGVGVVVECQHFCMCMRGVQKPGASTITSSVLGCFQSDARTRAEFFSLVGL 212
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A484DTW1_BRELC (GTP cyclohydrolase 1 n=2 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTW1_BRELC)

HSP 1 Score: 261 bits (666), Expect = 3.970e-79
Identity = 128/187 (68.45%), Postives = 158/187 (84.49%), Query Frame = 1 
Query:  349 DDDEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            D D+ +L+KM  A  TLLEC+GED TREGLVKTP RMA+ALL  T+GY Q+L+ ++NEAVFEEDH EM++V+DI+++S+CEHHMVPFTGKVHI YIP  KV+GLSKLAR++++++RRLQVQERLT+QIA AI   I P GV VVIEATHMCMVMRGV+K GA T+TSSV G F++D RTR+EF SLI
Sbjct:   61 DKDQEKLEKMAGAVITLLECIGEDPTREGLVKTPMRMAKALLYNTKGYGQTLADVLNEAVFEEDHDEMVIVRDIDLYSMCEHHMVPFTGKVHIGYIPNGKVLGLSKLARVSEVFARRLQVQERLTKQIANAIMGVIEPKGVAVVIEATHMCMVMRGVEKSGASTVTSSVLGVFKSDPRTRSEFMSLI 247
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A1V9ZNG1_9STRA (GTP cyclohydrolase 1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZNG1_9STRA)

HSP 1 Score: 259 bits (662), Expect = 4.670e-79
Identity = 125/185 (67.57%), Postives = 156/185 (84.32%), Query Frame = 1 
Query:  355 DEGRLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            D+ +L+KM  A   LLEC+GEDV REGL+KTP RMA+ALL CT+GY+Q+L  ++N+AVF ED+ EM++V+DIE++SLCEHHMVPF GKVHI YIP  KV+GLSKLARI+D+++RRLQVQERLT +IA+ + +AI  LGVGVVIEATHMCM MRGV+K GA T+TSSV GCFQ+D RTRAEF S +
Sbjct:   26 DKKKLEKMAAAVKVLLECIGEDVDREGLIKTPMRMAKALLYCTKGYTQTLEDVLNDAVFTEDYSEMVIVRDIELYSLCEHHMVPFVGKVHIGYIPNGKVLGLSKLARISDVFARRLQVQERLTIEIAQGLMKAIGALGVGVVIEATHMCMTMRGVEKSGASTVTSSVLGCFQSDPRTRAEFMSHV 210
[Close]
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Match: A0A448YXU5_9STRA (GTP cyclohydrolase 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXU5_9STRA)

HSP 1 Score: 261 bits (667), Expect = 6.620e-79
Identity = 123/182 (67.58%), Postives = 155/182 (85.16%), Query Frame = 1 
Query:  364 RLDKMQKACTTLLECLGEDVTREGLVKTPKRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHMVPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIREAINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFFSLI 909
            +L+KMQ AC T+LEC+GED +REGL+KTP R A+AL+  T+GY+Q+   + N AVF EDH EM++V++I +HSLCEHHMVPFTG++HI YIP  KVIGLSKLARIA++++RRLQVQERLT QIA+AI EA+ PLGV VV+E +HMCMVMRGVQK+G  T TSSV GCFQ++S+TRAEFFS+I
Sbjct:   87 QLEKMQDACKTILECIGEDPSREGLLKTPLRWAKALMFMTKGYAQTCQEVTNNAVFSEDHDEMVVVRNISIHSLCEHHMVPFTGRIHIGYIPNGKVIGLSKLARIAEVFARRLQVQERLTSQIADAIVEAVEPLGVAVVVECSHMCMVMRGVQKEGTSTATSSVRGCFQSNSKTRAEFFSII 268
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY40_ECTSI1.500e-12981.32GTP cyclohydrolase 1 n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YJ24_9STRA1.670e-8973.33GTP cyclohydrolase 1 n=1 Tax=Tribonema minus TaxID... [more]
A0A0P1B1V7_PLAHL1.490e-8170.97GTP cyclohydrolase 1 n=1 Tax=Plasmopara halstedii ... [more]
D0NDK8_PHYIT4.510e-8069.89GTP cyclohydrolase 1 n=13 Tax=Phytophthora TaxID=4... [more]
F0WAZ1_9STRA1.510e-7970.88GTP cyclohydrolase 1 n=1 Tax=Albugo laibachii Nc14... [more]
H3G797_PHYRM2.300e-7969.73GTP cyclohydrolase 1 n=2 Tax=Phytophthora TaxID=47... [more]
A0A6U4KYV2_9STRA2.530e-7966.84GTP cyclohydrolase 1 n=1 Tax=Phaeomonas parva TaxI... [more]
A0A484DTW1_BRELC3.970e-7968.45GTP cyclohydrolase 1 n=2 Tax=Bremia lactucae TaxID... [more]
A0A1V9ZNG1_9STRA4.670e-7967.57GTP cyclohydrolase 1 n=4 Tax=Saprolegniaceae TaxID... [more]
A0A448YXU5_9STRA6.620e-7967.58GTP cyclohydrolase 1 n=1 Tax=Pseudo-nitzschia mult... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:31502..36014 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY40
Preferred nameGCH1
PFAMsGTP_cyclohydroI
Model size1973
Max annot lvl2759|Eukaryota
KEGG rclassRC00263,RC00294,RC00323,RC00945,RC01188
KEGG koko:K01495
KEGG ReactionR00428,R04639,R05046,R05048
KEGG Pathwayko00790,ko01100,map00790,map01100
KEGG ModuleM00126,M00841,M00842,M00843
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000278,GO:0001505,GO:0001882,GO:0001883,GO:0002027,GO:0002164,GO:0002165,GO:0002168,GO:0002237,GO:0002376,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003824,GO:0003924,GO:0003933,GO:0003934,GO:0005488,GO:0005509,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006570,GO:0006575,GO:0006582,GO:0006584,GO:0006585,GO:0006725,GO:0006728,GO:0006729,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0006809,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0007049,GO:0007275,GO:0007389,GO:0007591,GO:0008015,GO:0008016,GO:0008150,GO:0008152,GO:0008217,GO:0008270,GO:0008277,GO:0008363,GO:0009058,GO:0009072,GO:0009108,GO:0009110,GO:0009396,GO:0009605,GO:0009607,GO:0009617,GO:0009712,GO:0009713,GO:0009790,GO:0009791,GO:0009880,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010460,GO:0010632,GO:0010646,GO:0012505,GO:0014916,GO:0016020,GO:0016043,GO:0016053,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017144,GO:0018130,GO:0018958,GO:0019001,GO:0019222,GO:0019238,GO:0019438,GO:0019748,GO:0019751,GO:0019752,GO:0019889,GO:0019899,GO:0019900,GO:0019901,GO:0022607,GO:0023051,GO:0030234,GO:0030334,GO:0030742,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031369,GO:0031410,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0032496,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032768,GO:0032770,GO:0032879,GO:0032991,GO:0033301,GO:0033555,GO:0033993,GO:0034097,GO:0034311,GO:0034312,GO:0034341,GO:0034612,GO:0034641,GO:0035150,GO:0035185,GO:0035296,GO:0035639,GO:0036094,GO:0040003,GO:0040012,GO:0042133,GO:0042136,GO:0042221,GO:0042303,GO:0042311,GO:0042335,GO:0042337,GO:0042364,GO:0042398,GO:0042416,GO:0042417,GO:0042423,GO:0042438,GO:0042440,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043085,GO:0043095,GO:0043167,GO:0043168,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043473,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0043933,GO:0044057,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044306,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044550,GO:0045087,GO:0045428,GO:0045429,GO:0045448,GO:0045776,GO:0045823,GO:0046146,GO:0046148,GO:0046165,GO:0046173,GO:0046189,GO:0046209,GO:0046394,GO:0046483,GO:0046655,GO:0046656,GO:0046872,GO:0046914,GO:0046983,GO:0048037,GO:0048066,GO:0048067,GO:0048069,GO:0048072,GO:0048265,GO:0048518,GO:0048522,GO:0048583,GO:0048856,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050880,GO:0050884,GO:0050896,GO:0050905,GO:0050999,GO:0051000,GO:0051019,GO:0051066,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051259,GO:0051260,GO:0051270,GO:0051291,GO:0051336,GO:0051341,GO:0051353,GO:0051704,GO:0051707,GO:0051716,GO:0060308,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071396,GO:0071704,GO:0071840,GO:0072593,GO:0080134,GO:0080135,GO:0090066,GO:0090322,GO:0097159,GO:0097164,GO:0097367,GO:0097458,GO:0097708,GO:0097746,GO:0097755,GO:0098772,GO:0120025,GO:0120038,GO:1900407,GO:1901031,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1901700,GO:1901701,GO:1902882,GO:1903409,GO:1903426,GO:1903428,GO:1903522,GO:1903524,GO:1904407,GO:1905627,GO:2000026,GO:2000121,GO:2000145,GO:2000274,GO:2000377,GO:2000379,GO:2001057
Exons5
Evalue6.88e-136
EggNOG OGsCOG0302@1|root,KOG2698@2759|Eukaryota
Ec32 ortholog descriptionGTP cyclohydrolase I
Ec32 orthologEc-27_007000.1
EC3.5.4.16
Description7,8-dihydroneopterin 3'-triphosphate biosynthetic process
Cds size774
COG categoryH
BiGG ReactioniMM904.YGR267C,iND750.YGR267C
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.5.1prot_P-littoralis_Contig738.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 31652..34832 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791523.5456445-UTR-P-littoralis_Contig738:31501..316511680791523.5456445-UTR-P-littoralis_Contig738:31501..31651Pylaiella littoralis U1_48UTRP-littoralis_Contig738 31502..31651 +
1680791523.6067147-UTR-P-littoralis_Contig738:34832..350081680791523.6067147-UTR-P-littoralis_Contig738:34832..35008Pylaiella littoralis U1_48UTRP-littoralis_Contig738 34833..35008 +
1680791523.6476882-UTR-P-littoralis_Contig738:35047..353701680791523.6476882-UTR-P-littoralis_Contig738:35047..35370Pylaiella littoralis U1_48UTRP-littoralis_Contig738 35048..35370 +
1680791523.6614327-UTR-P-littoralis_Contig738:35464..360141680791523.6614327-UTR-P-littoralis_Contig738:35464..36014Pylaiella littoralis U1_48UTRP-littoralis_Contig738 35465..36014 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791523.5585334-CDS-P-littoralis_Contig738:31651..321491680791523.5585334-CDS-P-littoralis_Contig738:31651..32149Pylaiella littoralis U1_48CDSP-littoralis_Contig738 31652..32149 +
1680791523.5756955-CDS-P-littoralis_Contig738:33662..338051680791523.5756955-CDS-P-littoralis_Contig738:33662..33805Pylaiella littoralis U1_48CDSP-littoralis_Contig738 33663..33805 +
1680791523.5882118-CDS-P-littoralis_Contig738:34699..348321680791523.5882118-CDS-P-littoralis_Contig738:34699..34832Pylaiella littoralis U1_48CDSP-littoralis_Contig738 34700..34832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.5.1

>prot_P-littoralis_Contig738.5.1 ID=prot_P-littoralis_Contig738.5.1|Name=mRNA_P-littoralis_Contig738.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=258bp
MLAAPNGAASSSSSSASGNGSAATGNNTTANGKGAFVPATGAAGPGMKRR
RSVPDKQAEEKRRALADDDEGRLDKMQKACTTLLECLGEDVTREGLVKTP
KRMAEALLACTRGYSQSLSSIVNEAVFEEDHHEMILVKDIEMHSLCEHHM
VPFTGKVHIAYIPRSKVIGLSKLARIADMYSRRLQVQERLTRQIAEAIRE
AINPLGVGVVIEATHMCMVMRGVQKQGAITMTSSVNGCFQADSRTRAEFF
SLIGLER*
back to top

mRNA from alignment at P-littoralis_Contig738:31502..36014+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.5.1 ID=mRNA_P-littoralis_Contig738.5.1|Name=mRNA_P-littoralis_Contig738.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4513bp|location=Sequence derived from alignment at P-littoralis_Contig738:31502..36014+ (Pylaiella littoralis U1_48)
GCTGTGGGACCGAGCTTCTTCTACTCTCTTGCATCATAAACACAGAGTGT
TCTGCATCCAAGCTTGTCACAGCCACGGACGCGATATCAGAAAAGTCGCG
TCTCGCATCCTGTCGTCACCGTTCCATCTCGGCCTGCACCAACCAACATC
ATGTTGGCCGCTCCTAATGGCGCCGCATCTTCATCGTCATCGTCGGCGAG
TGGAAACGGCTCAGCTGCTACAGGTAACAACACAACAGCAAATGGAAAGG
GCGCGTTCGTACCCGCAACCGGAGCAGCAGGACCTGGGATGAAGCGCAGG
CGCAGTGTGCCCGACAAACAAGCGGAAGAGAAACGACGCGCACTTGCGGA
TGACGACGAGGGTCGGCTGGACAAGATGCAGAAGGCGTGCACTACTCTGC
TGGAGTGCCTTGGGGAGGACGTGACCCGGGAAGGCTTGGTGAAGACCCCG
AAGAGGATGGCGGAGGCGCTCCTGGCGTGCACGCGAGGGTACAGCCAGAG
CCTGTCCAGCATCGTAAACGAGGCGGTGTTCGAGGAGGACCACCACGAGA
TGATTCTCGTCAAGGACATCGAAATGCACAGCTTATGCGAGCACCACATG
GTGCCCTTCACGGGCAAGGTTCACATCGCGTACATCCCACGGTCGAAGGT
GTGTGAGTGAGAGCAACGAATATACTTCGAAGTGCGTGTGTCGGACTCAC
CCAACAGCACGAGCCTCCCAGGTTTGGTCGACGGGCGTCAGTCTCAGGGT
CGTTTAGCGCTTCCAATAGCTGTCGTATCAAAGGAGCGTTGACATCACCA
TTCTCATCAGCAGCGGTCACAACAGCAGAAGCAACAGCAGCAGCAAAGGC
AAAGGCAACTTGTAACGTCGATTATTATACTGCTGTAGACCGACCAAATG
TTTTTTTATCGTGTTCAACTTCGGATACACTTGAAGGCCGCACAAGATGT
AGTACTCTACTGCTGCCTGTTTCCTTCTGTAGCGTATGCTCTGGACGCGA
AAATATCCCTAGATCCTTTCAAGCCAACCACACACAGATGCAGAGACGTG
TCGTACGTGCGTGCAGGTTGTCACCGCCGTTTCGATCATGTGATATATAC
CCTCCACTTCTATGGAGCCAAGCCGAAGTTCATGATAACCCGAGCTACAC
GTCTAAAAAACGGCAGCACGCGTTGTCGTATGTAAAATACCCAGCCTAAC
TTCTGCTCGAAGTACTTCATGTATCACAACTTGTTCGATTTTTTTGGGGT
GTGTGATATGGTACGCATATGACAGCACCCACACAAATCCGACAAAAAAA
GCAACGGTATCCGTGCGTTCCAACACATCGATGCTTTACGTGTCCTTCAT
GGCATCATCACTTTTTCTTGGCCCCACTACAGCAGTTACAAAGTGTACGG
TTACAATGCTGTGTAGCGGTGCGTTCGATTGGCTGGTTTGACTGTGGGAA
TTTCGGACTTTACATAAAAGTACGAGTATGGAGTCTCGGATACATCAGAC
GGGCGATAAAGCAGTGGGTGTCTGATACAAGGTGGTGCCCTGTCAGACAA
ATGAGTCCGCTTTTCATCTTTATACCGGTACATAAAAACGTAAAGACAAC
AATAATAGGCAAGCCCCGCAGTGGGGAGTGGAGACAAAAAAAAATCTGTG
TTAACTTCCTCCTGTGCGACCCCGGCTGAAGCGTTTGCCCATGATACTAT
CCCGAAAGAGGCGTAGAGTGGCGTCCAGAATACGGAGTATATGGGAAGAC
AGCACACACACTCACACACATCGGGAGCCGCTTTTCTATGAGGAGCCAAC
GTTTTTTGCGTGGGCTGGCATTCGGCAGTGTCCGTGGTTGTGTGTTGTCC
CCCATCCATCTGGTCCGGACGTACGTTTCGGAATACGTACCGCAGTATCG
TGTGCGTTGGCGCGTTCGTCTTGAACAACGGATCAGGAATTGTCCCCGAA
CACTCGTATCTCTCATCTACCCGATCTGGAAGCCACCCGTACCATTGCTG
TCGTTGTCCAGCACTATGCTCGTAAACTGATGTACCTTATTGCCGTTCTT
CACCACCCCAACAGCAGCACGAAAAAAAACATCATCATGATCATGCTGTC
GTTCATTTTCGCGATATCATGCGCTGGACGATCAAAGTTCACTCCATCCG
CTGCAATCCAGGTGATCGGCTTGAGCAAGCTGGCTCGCATTGCGGACATG
TACTCGCGACGACTTCAGGTCCAGGAGCGATTGACGCGCCAGATAGCCGA
GGCAATTCGAGAAGCCATCAACCCGCTGGGTGTAGGAGTGGTCATCGAAG
CCACGTGAGTTGTAGAAACGGGGAAGTCAAATCAGGAGTCGGCTTGAAGT
CCATTTGGCCTGGTATGAGCGTTGACTACAAATGCACTATTGATAAATGC
CACCTTACCAAGGCAAAGTTGAAAGCATGCACCGCCGAAAGAAGGAAGGT
GGGGGACCTCATAGAGAAGCCACTATCCTGCCTGTGTGGCCCCGACTCAT
ACCACCTTATGTGACAGTGCCTGAAGGAGAGAGAGAGGGAGATACTAAAA
TTGTAATGATGTGATGTATATTGTTTGGTCGAATATTTGTTTTGCCCTTG
TGCACTGCTGGCCTCGCTCACTACTACAGTAGATGAGAATGAAATTTGGT
ACGGTTTGTGCTGTGCCCGACGAACACACAGCGCCTGCGGCAAGCGGGCC
TCTTAGACACTGTAGAAGCGAAATCCCGTTGTGAGCACGTCTCTGTGGCG
TGGCTTCGTACTCCCACCCTGCTGATCGTTGCGAGGAAATGCACCGCTCT
TCGGATTCTTGTGTTTTATGGACATCCCTCGTCATGATTTTGAGTTGGCA
TATTTTCGAAACCCCTTTCATGATTTGGAACGCGCAAAATCACACGCCCC
AGACTATGTTTGGACAATTGAGAGCGTTTGTTTCACCCCATCGAGTGCAC
CCTACATCCCCCGGACTATGTCTGGACAACGGAGAGCGTTCGTTTCTCTC
TACCGAGTTTTGGACGACTGAGAGCGTTCGTTGCACCCCACCAAGTGCAC
TCTAGACTCTACATCCCCCGGCCTATGTTCGGACAATTGAGAGCGTTTGT
TTTTGTTTGACCCGACCAAGTGCACTCTGTTGGTGCCGGCCGCATGTCTC
TGTCTCCCTCTCCCGTGTACCCCGCTTGCTTTTGGCCGTTCTTCTCAGTC
ACATGTGCATGGTCATGCGAGGCGTGCAAAAGCAGGGGGCGATCACGATG
ACTAGCAGCGTGAACGGCTGCTTTCAGGCGGACTCTAGAACAAGGGCCGA
GTTTTTCAGCCTGATTGGCCTCGAGCGGTGAAATCACGGCGATTTTTTTT
CATGGAGGTTCATGGCTCTATTCAGATCGATGATGGGCGGGGGTGTTCAA
CCCGACTGGTGTTTCGCGTTGGACAGTCAATGCCGTCGAAAATGCATGCG
TGTCTATAGTAAACCAAGGACGGATTTAACGTTTATCCGCCAGACTTGCA
GCCTTAAGCAGCAAAGCGTTTTTAAACCGGGATGATTTTCGGGGGGGGGG
GGGTAGAAGATTCTTGTATTATGAAGCAGTGTCGTGCTGCGGTATGTAAA
ACCCTTGAAATCTGCAAGTGGGGAAAAAATAGTTGGATTTCGATGGGGAT
TTATTGTACCCCTTTTGAATGCGGGGCGGGTGTGGACAAACTACTGGCGC
TCTCGCGGGATATCATGGATGGCAAACGTAGAGTAGGAACCTAATCATTG
TGTTGTAGCGCGTGCTCACGAAGAGCCGTGAGCCCTGTAGGGCAGAAGGT
GAGACCTGATCAACTGCCTTGCTATGCAACAAGACAGGGGTACGGAGCCG
CAGAAGTGGTAAATGCCGGGTGTACCGAGTACACCTTGACTTTACATCAG
CACGGGGTGCAAACGAGTAACGGTTATGGCGGTAGTGTAGGCGACCCACC
GTTAGATCGAAAGAGGTCAGGCACGGCTCGAGTGACCGCTGCCTCCCTCC
CTCCCTCCCTCCAGTACTTAGAGTTAAGACTCACACAAGGGTGAGACCCT
AATTTTCACGCGTCGGCCAGACAGCGGTAGACGCTGAGAGTTTTGAGTTC
TTTTTTTGAAACCGGGTGTTCTTGCGGCTTCGACGTCAGTGACGAGATCC
TCAGTACGCGATTGCTGTGTGGTAGTCTTGCAGGCACAACGGCGTGTTTG
TCTTGGGGGGTGAGGGGGTCCGTGGCGATAAAATCAACACAGCACAACGG
GGGATTTTTGTTGTCTCTTTTTTATGTGGTTTCGTCCTCGTGAGTGTTGC
TGCTACGCCAGCATTGATTGAAATCAGTTCCCCGGGGTGTGTTTTTGTCC
TTCGATATTGTAGCCATGCTTTGGGGGTAGGCCACTCGCATGTTATGTGG
AAGCATGTGTTTGCGCGGTGTAAATTACTTCGTACGTGATAGACCACAAG
TTTCGTGGAAACCATCGACTAATCGTTCAAGCCAGAAATGTCCGCACACA
CAGCAGTGCAGCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig738:31502..36014+

>mRNA_P-littoralis_Contig738.5.1 ID=mRNA_P-littoralis_Contig738.5.1|Name=mRNA_P-littoralis_Contig738.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=774bp|location=Sequence derived from alignment at P-littoralis_Contig738:31502..36014+ (Pylaiella littoralis U1_48)
ATGTTGGCCGCTCCTAATGGCGCCGCATCTTCATCGTCATCGTCGGCGAG
TGGAAACGGCTCAGCTGCTACAGGTAACAACACAACAGCAAATGGAAAGG
GCGCGTTCGTACCCGCAACCGGAGCAGCAGGACCTGGGATGAAGCGCAGG
CGCAGTGTGCCCGACAAACAAGCGGAAGAGAAACGACGCGCACTTGCGGA
TGACGACGAGGGTCGGCTGGACAAGATGCAGAAGGCGTGCACTACTCTGC
TGGAGTGCCTTGGGGAGGACGTGACCCGGGAAGGCTTGGTGAAGACCCCG
AAGAGGATGGCGGAGGCGCTCCTGGCGTGCACGCGAGGGTACAGCCAGAG
CCTGTCCAGCATCGTAAACGAGGCGGTGTTCGAGGAGGACCACCACGAGA
TGATTCTCGTCAAGGACATCGAAATGCACAGCTTATGCGAGCACCACATG
GTGCCCTTCACGGGCAAGGTTCACATCGCGTACATCCCACGGTCGAAGGT
GATCGGCTTGAGCAAGCTGGCTCGCATTGCGGACATGTACTCGCGACGAC
TTCAGGTCCAGGAGCGATTGACGCGCCAGATAGCCGAGGCAATTCGAGAA
GCCATCAACCCGCTGGGTGTAGGAGTGGTCATCGAAGCCACTCACATGTG
CATGGTCATGCGAGGCGTGCAAAAGCAGGGGGCGATCACGATGACTAGCA
GCGTGAACGGCTGCTTTCAGGCGGACTCTAGAACAAGGGCCGAGTTTTTC
AGCCTGATTGGCCTCGAGCGGTGA
back to top