mRNA_P-littoralis_Contig738.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig738.3.1
Unique NamemRNA_P-littoralis_Contig738.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI)

HSP 1 Score: 731 bits (1888), Expect = 9.750e-255
Identity = 416/706 (58.92%), Postives = 475/706 (67.28%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHR----KTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIRVCNTPT*PICASYSR*AILFRDPRN-----ARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTFYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQKDW---GVLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGV----------------ECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            WQESLRDNL LIGFHVYSQLFPSLLENRIKLNKASHHYRD+DRATPEGR + EQRREAL R QRVGSA SVFHGLPY V+KSKSILQFM MDFDDDDSRQ FFL R+F+ ISG+RGETSSSSVY SCSSAIGLMWFATVILGRPT FESVVLPL+V+ERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEG H GDAYGLFKATRSAP D+  ++ + R    KTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSI LTYGE+AGVAA AACNT QGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVS NLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKG       P ++      G + + P  F K                + N     +        +L+ D  N     A  N  + RS   R     ++    +   +R + +  + + +  + S      + + +     +            C  + R  + +    +  + W      +R+ K+ +    Y LG     F P   + +     L+ G                    +R   +   ANTAAH IGN VLGG+V+SAC VE  E    P G K    R+EF+ DIRASL +Y GD + MF+DLV+KRKVGQLGE E  F+
Sbjct:   89 WQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRNQLEQRREALTRLQRVGSARSVFHGLPYGVDKSKSILQFMKMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRTYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTYGERAGVAAMAACNTPQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSNNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGVCFGVWHPLKSLIGEKLGASMEHPSAFLK----------------ISNQEAELLYEHAKNTGVLYSDVANLCVLLALSNCFQ-RSQVMREATVNEYALVPDGTHFRHTFKDRTWKTATASASSGALPVSHFEMSADQSMMIHFVACVGHRFCDVDMRDGNRRLFVNSNGEGWTPNDTRSRFKKIGA----YWLGIEN--FSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLRSSYAAASANTAAHTIGNVVLGGVVNSACRVEIAENGDGPQGPKLRKIRLEFLADIRASLLKYSGDAKHMFQDLVRKRKVGQLGESEKWFR 771          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE)

HSP 1 Score: 682 bits (1759), Expect = 1.940e-226
Identity = 401/708 (56.64%), Postives = 457/708 (64.55%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHR----KTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIRVCNTPT*PICASYSR*AILFRDPRN-----ARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTFYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQKDWG-----VLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGV----------------ECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            WQESLRDNL LIGFHVYSQLFPSLLENRIKLNKASHHYRD+DRATPEGR++ EQRREAL R QRVGSA SVFHGLPYSV+KSKSILQFMNMDFDDDDSRQ FFL R+F+ ISG+RGETSSSSVY SCSSAIGLMWFATVILGRPT FESVVLPL+V+ERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEG H GDAYGLFKATRSAP D+  ++ + R    KTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSI LT  +++               TL    V AKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKG       P ++      G + + P  F K                + N     +        +L+ D  N     A  N  + RS   R     +F    +   +R + +  + + +  + S      + + +     +            C  + R  D  R      K  G       +R+ K+ +    Y LG     F P   + +     L+ G                    +R       ANTAAH IGN VLGG+V+SAC VE  E    P G K    R+EF+ DIRASL +Y GD + MF+DLV+KRKVGQLGE E  F+
Sbjct:   89 WQESLRDNLTLIGFHVYSQLFPSLLENRIKLNKASHHYRDIDRATPEGRKQLEQRREALTRLQRVGSARSVFHGLPYSVDKSKSILQFMNMDFDDDDSRQRFFLQRDFATISGKRGETSSSSVYASCSSAIGLMWFATVILGRPTAFESVVLPLNVMERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGFHVGDAYGLFKATRSAPGDAERIATLFRAYTEKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIHLTAAQRSS--------------TL----VSAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGVCFGVWHPLKSLIGEELGASMEHPSAFLK----------------ISNQEAELLYEHAKNKGVLYSDVANLCVLLALSNCFQ-RSQVMREATMNEFALVPDGTHFRHTFKDRTWKTATASASSGALPVSHFEMSADQSVMIHFVACVGHRFCDVDMR--DGNRRLFVNSKGEGWTPNDTRSRFKKIGA----YWLGIEN--FSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLRSSYGAASANTAAHTIGNVVLGGVVNSACHVEIAENGDGPQGPKLRKIRLEFLADIRASLLKYSGDAKHMFQDLVRKRKVGQLGESEKWFR 753          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 1.510e-155
Identity = 296/707 (41.87%), Postives = 409/707 (57.85%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHRK----TKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIRVCNTPT*PICASYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTF---------YSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQKDWGVLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGV----------------ECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ES  DN  L+GF VY+QLFP LL+NRIKLN A++H+  LD ++ +GR K EQRR A+ R +R G   SVF GLPY V+ S  IL +M MD +++D R  FF  REFS+I  +RG+  SSSVY SCS A+ L+WFAT IL RP   ES++LPLSV ERR +E+R+ CPP   DG I+ ++T+W+ VF AI+  HRNI Y MLE+AC+DKYIEG+H  D Y +F+AT +AP+D  +++ + R      K+G+E G VVG +D+IR + V+++G++DG VLGSIF  YGE+A +  +A C+  +GG +LFD SV  KL EI+AHFD +LWK RK+ K+   V+ N+DPAG+NKK++GG+MLDPTDPK++++M+ ML+                 SGQ     LH  K   T  +G T T    +C      +  S+ R  +L    R A   DE V     RH     F   N +  ++ +   G+S     +      D +          +  CG   L         EA   F    V+ K  S   QKD  + +R+ ++      + LG +   FGP   + +     L+ G                    +R       ANTAAH +GN+VLG +V+SAC  ETTEK   PYGKK +A R+EF G+IRASL +Y G+ RL+FR L++KR   QL EGE  F+
Sbjct:   87 WTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSADILAYMKMDVEEEDERFRFFTKREFSMIFSKRGQVGSSSVYASCSMALSLLWFATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIEGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQAECSRLEGGSSLFDDSVSNKLAEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGGKMLDPTDPKSIDLMHTMLQTI---------------SGQEEGEQLH--KHVLT--AGVTYTDVANLCTLLL--LSFSFQRSQVL----REATV-DEFVLVPDARHYK---FSFKNRR--FKTASSGGTSSAPPVSHFMLSPDQSMITRFIAIVGHRFCGTLCL-------DNEARRLF----VNTKGQSWT-QKD--ISSRFKRIGM----HWLGISN--FGPHVCRTFWSTHALNSGQISGSNLEDFSSFLQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFR 742          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 8.260e-152
Identity = 278/688 (40.41%), Postives = 390/688 (56.69%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHRK----TKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIRVCNTPT*PICASYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTFYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQK---DWGVLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGVECH---VR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ES  DN  L+GF VY+QLFP LL+NRIKLN A++H+  LD ++ +GR K EQRR A+ R +R G   SVF GLPY V+ S  IL +M MD +++D R  FF  REFS+I  +RG+  SSSVY SCS A+ L+W AT IL RP   ES++LPLSV ERR +E+R+ CPP   DG I+ ++T+W+ VF AI+  HRNI Y MLE+AC+DKYI+G+H  D Y +F+AT +AP+D  +++ + R      K+G+E G VVG +D+IR + V+++G++DG VLGSIF  YGE+A +  +  C+  +GG +LFD SV  K TEI+AHFD +LWK RK+ K+   V+ N+DPAG+NKK++GG+MLDPTDPK++++M+ ML+              V   G  +    + C       S   S + +R        +    +     F+   N R         S   P+      P++    R     G                  +  CG   L    ARR        +G+    K  S  F++    W  ++ +   +  C  +   H       S       LE  S  ++     +R       ANTAAH +GN+VLG +V+SAC  ETTEK   PYGKK +A R+EF G+IRASL +Y G+ RL+FR L++KR   QL EGE  F+
Sbjct:   87 WTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGFTRSVFMGLPYRVDTSAHILAYMKMDVEEEDERCRFFTKREFSMIYSKRGQVGSSSVYASCSMALSLLWVATAILARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEDKYIKGVHIADVYAVFRATMTAPDDMNSIAALVRSYNQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFSAYGERACLKVQPECSRLEGGSSLFDDSVSNKQTEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGGKMLDPTDPKSIDLMHTMLQTISGQEEGEQLHKHVLTVGVTYTDVANLCTLLLLSFSFQRSQV-LREATVDEFVLVPDATHYKFSFK---NRRFKTASSGGTSSAPPVSHFMLSPDQSMITRFIAIVG------------------HRFCGTLCLDN-EARR---LFVNTKGQSWTQKDISSRFKRIGMHWLGISNFGPHV--CRTFWSTHALNSGQISGSN----LEDFSSFIQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFR 742          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI)

HSP 1 Score: 460 bits (1183), Expect = 1.100e-148
Identity = 287/713 (40.25%), Postives = 401/713 (56.24%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHRK----TKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIR------VCNTPT*PICA-SYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*---SL*NVSRPKHDDT-FYSLCGPPLLRRRHARRQQEAVCQFEGRR----VDPKRHSVAFQKDWGVLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGV----------------ECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ES  DN  L+GF VYSQLFP LL+ RIKLN A++H+  LD A+ +GR K EQRR A  R +R G   SVF GLP+ V+   +IL FM MD D++D R  FF  REFS++  +RG+  SSSVY SCS A+ L+WFAT +L RP   ESV+LPLSV ER+++E+R+ CPP   DG I+ + T+W+ VF AI   HRNI Y +LE+AC++KYIEG+H  D Y  F+AT +AP D  +++ + +     +K+G+E G VVG +D+IR +PV+++G++DG VLG+IF TYGE+A    +AACN  + G TLFD SV  KL EIMAHFD +LWK RK+ K+   V+ NLDPAG+NKK++GG+MLDPTDPK++ +M+ MLK        P +       G + + P  F +            L         + N  T  I + S+ R  +L          DE V    G H  +  F+G      ++ +   G+S     S  N+S  +   T F +  G               V + +G      V+ K  S   QKD  V +R+ ++    +          FGP   + +     LS G                    +R        N+AAH +GN VLG +V++AC  ETTEK   PYGKK +A R+EF G+IRASL  + G+ R +FR++++KR   QLG+ E  F+
Sbjct:   84 WTESFHDNKTLMGFIVYSQLFPKLLQTRIKLNAATYHWGHLDPASEKGRTKLEQRRSADDRLKRNGFTPSVFRGLPHRVDTCANILAFMKMDVDEEDERLRFFNRREFSILVAERGQVGSSSVYSSCSMALSLLWFATTVLARPCCLESVILPLSVAERKMMEQRFRCPPECFDGPIKSFHTNWKDVFTAIGTCHRNIDYTLLEKACENKYIEGVHVADVYAAFRATMTAPGDMNSIAALVQSYKEHSKHGVESGAVVGIIDVIRDKPVEAIGKIDGGVLGTIFQTYGERACAEVRAACNKLESGSTLFDDSVSNKLREIMAHFDCELWKARKKEKVERIVAANLDPAGMNKKIEGGKMLDPTDPKSIALMHAMLKSISRQVWKPLKNMIGTALGASLEYPTAFLRISEEEGEKLYKHLVAAGVVYNDIANLCTLLILSFSFQRSQVLRESTV-----DEFVLVSGGTH-YKFSFKGRR----FKTASSGGASSAPPVSHFNLSPDQSMITKFIAFIGHRFC----------GVLKNDGNGGRLFVNSKGQSWT-QKD--VSSRFKRIGMQWLGIQ------NFGPHVCRSFWSTHALSSGQVSASNLENFSSFLQVSSSTLRNSYMSATGNSAAHTVGNQVLGAVVNAACTGETTEKGTRPYGKKLSARRLEFAGEIRASLARFQGNGRRLFREMLQKRNASQLGDTETWFR 767          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 3.170e-135
Identity = 268/708 (37.85%), Postives = 385/708 (54.38%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEK--SKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGV----HRKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSGCTSTLRIRVCNTPT*PICASYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTFYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSV---AFQKDWG---VLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGV----------------ECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDV--RLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ES  DN  L+GF VY+ LFP LL NRIKLN A++H+  LD ++ +GR K EQRR A++R +RVG A S+F GLP+ ++     SIL FMNM  +++D R  FF +REFS+I  +RGE  SSSVY SCS+A+ L+WFAT +L RP   ES++LP++V ERR +E+R+ CP    DG IR ++T W GVF AI  PHR+I Y ++E A  +KY+EG+H  DAY  F+AT +AP D  +++ +     R  K+G+E G VVG+LD+IR RP  ++G++DG VLG+I  TYGE A    +A C    GG +LFD SV +KL EIM HFD+QLW+ RK+ K+   +  N+DPAG+NKKV+GG+MLDPT+P +V  M  MLK        P R+   +  G + ++P  F +   +     T    +R  +     I    +   + F   R+    +  V       P    F+   +   ++ +   G       NV+ P     F       ++ +  A       C  +  + D  R  +   A  + W    + +R+ K+    +      +   FGP   + +     L+ G                    +R       ANTAAH +GN+VLG + + AC  ETTE+   PYGKK  A R EF  DI+A L ++ G    R +FR L++KR   QL E E  F+
Sbjct:   91 WAESCHDNKTLMGFIVYATLFPKLLRNRIKLNAATYHWAHLDSSSAKGRLKLEQRRGAVSRLRRVGFARSLFRGLPHRIDPVADTSILVFMNMSVEEEDERFRFFTNREFSMIYSERGEVGSSSVYSSCSTALSLLWFATTVLARPCCLESIILPINVRERRRMEQRFGCPSHFFDGPIRSFQTTWGGVFAAIGTPHRSIDYTVIEFATSEKYVEGVHVSDAYAAFRATMTAPGDCASIAALVQSYRRSAKHGVESGAVVGALDVIRDRPAGAIGKIDGGVLGTILSTYGETACANVQAECVKLDGGASLFDDSVRSKLGEIMTHFDNQLWRARKKDKVERLIVANMDPAGINKKVEGGKMLDPTNPDSVAKMMGMLKSLSGQVWKPLRSLIGKALGASLESPGPFLQISESEAQ--TLAQFVRAASVTYADIANLCTLLLLSFSFQRSQVLREATVDEFV-LVPDATRFKFSFKNRRFKTAASSGG------NVAAPPVSH-FVLTPDQSMIVKFIATAGHGLCCHGKATKPDNGRRRLFVNARGQGWNQKDISSRFKKIGIEWL------SIENFGPHVCRSFWASSALNSGQVNSNNLEDFSSFLQVSSATLRNSYMAATANTAAHTLGNEVLGAVSNMACTGETTERANRPYGKKLCAKRNEFSADIQAYLAKHRGTTTSRKVFRALIRKRAASQLLEDEKWFR 782          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K)

HSP 1 Score: 422 bits (1085), Expect = 4.010e-134
Identity = 271/698 (38.83%), Postives = 389/698 (55.73%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHR----KTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRP------SGCTSTLRIRVCNTPT*PICA-SYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLS-VEWGSSR*SL*NVSRPKHDDT-FYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQK---DWGVLARY*KLLSPCVPY--VLGHTRPEFGPSQ*Q*YR*LELLSPGVECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETT-EKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ESL DN  L+G+ VYSQL P   ENR+KL   S H+ +L+ +T   R   EQRR A  R +R GS  S F+GLPYSV+ +K++L++MN+DF+  D R  FFL REF++ S + G+ ++SSVY SCS A+ LM+F  VILGRP   ESV+LPLSV ER VLE+ W CP  HLDG I  ++T+WR VFRAI  PHR+I Y+ LERA ++ YI G H  D + L+ ATRSAP D+ T++G+       +K G+E G VV  LD++R++P+++VG++DGSVLG+I  TYG++  +  +A C   Q G  +LFD SV  KL EI+ H D  LWK RKRLK+   V+ +LDPA +NKK+  G+MLDP DP + E M+ ML+        P +       G +   P  F +            +     +   + N  T  + + S+ R  +L    R A  N+       G  P    ++   +   ++ +    GS   S  N+S  +     F ++ G           +++ +   +GR       +  F+K    W  L  +   +  C  +         +  PS  + +     +S      +R        N+AAH +G++VLG +V SA + ETT E+   P G K    RMEF+G+IRASL ++ G+ +L+FRDLVKKRKVGQLGEGE  F+
Sbjct:   84 WTESLHDNSCLMGYLVYSQLLPCAAENRVKLKSGSAHWNELNVSTDRAR--LEQRRAAYDRLRRNGSTLSAFYGLPYSVDMTKNVLEYMNIDFEQSDLRHRFFLGREFAMTSSEHGKMNASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWREVFRAIGTPHRSINYVCLERATEESYIGGKHVADCFALYNATRSAPGDAKTIAGLANHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGQRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADIALWKARKRLKVELKVNDSLDPADMNKKISEGKMLDPCDPASSEKMHAMLQSISRQVWLPLKTLIGEALGVSMDHPSAFLRISDEEAHRLYEHASTKGMVYADIANLNTLLVLSNSFQRSQVL----REATLNE------FGLVPDGTFYRQTFKDRAFKTAGASSGSPPVSHFNLSPGQSMMVHFIAVVGHRFCNADMKDSKRKLLLNSKGRGCVQNDINSPFKKIGAHWLGLPNF--CVHTCRTFWATAALNSGQVDPSNIEDFGSFLQVSSST---LRSSYMSAAGNSAAHTLGHEVLGSVVTSATSGETTTEQGDAPQGPKLRRIRMEFVGEIRASLLKHSGNAKLLFRDLVKKRKVGQLGEGEIWFR 764          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: B2KWI7_ECTSI (EsV-1-213-like protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI7_ECTSI)

HSP 1 Score: 416 bits (1070), Expect = 3.040e-133
Identity = 205/399 (51.38%), Postives = 282/399 (70.68%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHRK----TKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWK 1185
            W ES  DN  L+GF VY+QLFP LL+NRIKLN A++H+  LD ++ +GR K EQRR A+ R +R GS  SVF GLPY+V+ S +IL FM MD +++D R  FF  REFS+I  +RGE SSSSVY SCS A+ L+WFAT +L RP   ES++LPLSV ERR +E+R+ CPP   DG I+ ++T+W+ VF AI+  HRNI Y MLE+AC+ KYI+G+H  D Y +F+AT +AP+D  +++ + R      K+G+E G VVG +D+IR + V+++G++DG VLGSIF  YGE+A +  +A C+  +GG +LFD SV  KLTEI+AHFD +LWK RK+ K+   V+ N+DPAG+NKK++G +MLDPTDPK++++M+ ML+                 SGQ WK
Sbjct:   87 WTESFHDNKTLMGFIVYTQLFPKLLQNRIKLNAATYHWAHLDNSSEKGRTKLEQRRNAVDRLKRNGSTRSVFMGLPYTVDTSANILTFMKMDVEEEDERFRFFTKREFSMIFSKRGEVSSSSVYASCSMALSLLWFATAVLARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHKYIKGVHIADVYAVFRATMTAPDDMNSITALVRSYIQHAKHGVESGAVVGVIDVIRDKSVEAIGKIDGGVLGSIFPAYGERACLKVQAECSGLEGGSSLFDDSVSNKLTEILAHFDCELWKARKKDKVERVVAANMDPAGMNKKIEGEKMLDPTDPKSIDLMHTMLQTI---------------SGQVWK 470          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 1.170e-127
Identity = 270/697 (38.74%), Postives = 384/697 (55.09%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGV----HRKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGP-TLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRP------SGCTSTLRIRVCNTPT*PICA-SYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLS-VEWGSSR*SL*NVSRPKHDDT-FYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQK---DWGVLARY*KLLSPCVPY--VLGHTRPEFGPSQ*Q*YR*LELLSPGVECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ESL DN  L+G+ VYSQL P   ENR+KL   S H+ +L+ +T   R    QRR A  R +R GS  S F+GLPYSV+ +K++L +MN+DF+  D R  FFL REF++ S + G+ ++SSVY SCS A+ LM+F  VILGRP   ESV+LPLSV ER VLE+ W CP  HLDG I  ++T+W  VFRAI  PHRNI Y+ LERA +D YI G H  D + L+ ATRSAP D+ T+ G+       +K G+E G VV  LD++R++P+++VG++DGSVLG+I  TYG++  +  +A C   Q G  +LFD SV  KL EI+ H D +LWK RKRL +   V+ +LDPA +NKK+  G+MLDP DP + E M+ ML+        P +       G +   P  F +            +     +   + N  T  + + S+ R  +L    R A  N+       G  P    ++   +   ++ +    GS   S  N+S  +     F ++ G           +++ +   +G+          F+K    W  L  +   +  C  +         +  PS  + +     +S      +R        N+AAH +G++VLG +V SA + ETTE+   P G K    RMEFIG+IRASL ++ G+ +L+FRDLVKKRKVGQLGEGE  F+
Sbjct:  619 WTESLHDNSCLMGYLVYSQLLPCASENRVKLKSGSAHWNELNVSTDRAR--LGQRRAAYDRLRRNGSTFSAFYGLPYSVDMTKNVLAYMNIDFEQSDLRHRFFLGREFAMTSSEHGKINASSVYTSCSKALSLMYFTVVILGRPCCLESVILPLSVTERSVLEQTWGCPGTHLDGPINKFQTNWCEVFRAIGTPHRNINYVCLERATEDCYIGGKHVADCFALYNATRSAPGDAKTIKGLVNHYRLNSKIGVESGAVVCVLDVLREKPMEAVGKIDGSVLGAITSTYGKRVSLDVQARCLGLQAGEHSLFDCSVSNKLGEIINHADMKLWKARKRLIVELKVNDSLDPADMNKKISEGKMLDPCDPASSEKMHAMLQSISRQVWLPLKTVIGEALGVSMDHPSAFLRISDEEAHRLYEHASTKGMVYADIANLNTLLVLSNSFQRSQVL----REATLNE------FGLVPDGTFYRQTFKDRAFKTAGASSGSPPVSHFNLSPGQSMMVHFIAVVGHRFCNANMKDDKRKLLLNSKGQGYVQSDIKSPFKKIGAHWLGLPNF--CVHTCRTFWATAALNSGQVDPSNIEDFGSFLQVSSST---LRSSYMSAAGNSAAHTLGHEVLGSVVTSATSGETTEQGDAPQGPKLRRIRMEFIGEIRASLLKHSGNAKLLFRDLVKKRKVGQLGEGEKWFR 1298          
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Match: A0A6H5K1E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1E4_9PHAE)

HSP 1 Score: 377 bits (967), Expect = 4.260e-118
Identity = 245/684 (35.82%), Postives = 348/684 (50.88%), Query Frame = 1
Query:    1 WQESLRDNLALIGFHVYSQLFPSLLENRIKLNKASHHYRDLDRATPEGREKAEQRREALARPQRVGSAHSVFHGLPYSVEKSKSILQFMNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFATVILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVFRAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVSGVHRKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAGVAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVSTNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*RA*SVRNSGQAWKTPLHFCKFPTTRPSG------CTSTLRIRVCNTPT*PICASYSR*AILFRDPRNARGNDERVRSCSGRHPLQADFQGPNEQDGYRLSVEWGSSR*SL*NVSRPKHDDTFYSLCGPPLLRRRHARRQQEAVCQFEGRRVDPKRHSVAFQKDWGVLARY*KLLSPCVPYVLGHTRPEFGPSQ*Q*YR*LELLSPGVECHVR*LCSCLPANTAAHKIGNDVLGGLVDSACAVETTEKVPEPYGKKRNASRMEFIGDIRASLHEYGGDVRLMFRDLVKKRKVGQLGEGEYVFK 2034
            W ES  D   L+GF VY+QL P LL+NRIKLN A++H+  LD +  +G  K EQRR A+ R +R GS  SVF  LPY V+ S +IL FM +D +++D R  FF  REFS+I  +RG+ SSSSVY SCS A+ L+WFAT  L RP   ES++LPLSV ERR +E+R+ CPP   DG I+ ++T+W+ VF AI+  HRNI Y MLE+AC+ K                                                    + V+++G++DG VLGSI   +G++A +  +A C+  +GG +LFD SV  KL EI+AHFD +LWK RK+ K+   V+  +DPAG+NKK++GG++LDPTDPK+++ M+ ML         P +    +  G + + P  F +                  LR    +     + A++ + ++  R  + A          S   P+      P++    RL    G                  +  CG        ARR        EG+    K  S  F++    +  +   +S   P         F          L++ S  +    R       ANTAAH +GN++LG +V+SAC  ETTEK   PYGKK +A R+EF GDIRASL ++ G+ RL+FR  ++KR   QL EGE  F+
Sbjct:   51 WTESFHDK-TLMGFIVYAQLLPKLLQNRIKLNAATYHWAHLDNSKEKGSTKLEQRRRAVDRLKRNGSTRSVFMRLPYRVDTSANILAFMKLDVEEEDERFRFFTKREFSMIFSKRGQVSSSSVYASCSMALSLLWFATAALARPCCLESIILPLSVTERRAMEQRFKCPPQFFDGPIQSFQTNWKDVFAAIDTHHRNINYTMLEKACEHK---------------------------------------------------DKSVEAIGKIDGGVLGSIVSAHGQRACLKVQAECSRLEGGSSLFDDSVSNKLNEILAHFDCELWKARKKDKVERVVAAKMDPAGMNKKIEGGKILDPTDPKSIDRMHTMLTVISRQVWKPLKKLIGKALGASLEYPAAFLRISQQEGEHQYKHMITAGVLRESTIDDFVLALDATHYKFSLKGRRFKTASSG-----GASSAPPVSHFMLSPDQSMITRLIATVG------------------HMYCGIQQCLDNEARR---LFVNSEGQSCTQKDISSRFKR----IGMHWLGISNLDPIGSNLDFSSF----------LQVSSTTL----RNSYMAAAANTAAHTVGNELLGAVVNSACTGETTEKGARPYGKKLSARRLEFAGDIRASLAKFSGNGRLLFRAFLQKRNASQLVEGEKWFR 638          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig738.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LP31_ECTSI9.750e-25558.92EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP... [more]
A0A6H5JVT4_9PHAE1.940e-22656.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2T2_9PHAE1.510e-15541.87Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0T8_9PHAE8.260e-15240.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B2KWI6_ECTSI1.100e-14840.25EsV-1-213-like protein 2 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5J9C0_9PHAE3.170e-13537.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN77_ESV1K4.010e-13438.83EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K[more]
B2KWI7_ECTSI3.040e-13351.38EsV-1-213-like protein 1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JJP2_9PHAE1.170e-12738.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1E4_9PHAE4.260e-11835.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig738contigP-littoralis_Contig738:16800..18844 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2034
Hectar predicted targeting categoryother localisation
Exons2
Cds size882
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791523.47171-UTR-P-littoralis_Contig738:16799..176871680791523.47171-UTR-P-littoralis_Contig738:16799..17687Pylaiella littoralis U1_48UTRP-littoralis_Contig738 16800..17687 -
1680791523.5077937-UTR-P-littoralis_Contig738:18580..188441680791523.5077937-UTR-P-littoralis_Contig738:18580..18844Pylaiella littoralis U1_48UTRP-littoralis_Contig738 18581..18844 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791523.4835575-CDS-P-littoralis_Contig738:17687..181391680791523.4835575-CDS-P-littoralis_Contig738:17687..18139Pylaiella littoralis U1_48CDSP-littoralis_Contig738 17688..18139 -
1680791523.4935765-CDS-P-littoralis_Contig738:18150..185801680791523.4935765-CDS-P-littoralis_Contig738:18150..18580Pylaiella littoralis U1_48CDSP-littoralis_Contig738 18151..18580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig738.3.1prot_P-littoralis_Contig738.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig738 17688..18580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig738.3.1

>prot_P-littoralis_Contig738.3.1 ID=prot_P-littoralis_Contig738.3.1|Name=mRNA_P-littoralis_Contig738.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=294bp
MNMDFDDDDSRQWFFLHREFSVISGQRGETSSSSVYGSCSSAIGLMWFAT
VILGRPTTFESVVLPLSVVERRVLEERWLCPPCHLDGAIRGWETDWRGVF
RAINVPHRNIAYIMLERACQDKYIEGLHAGDAYGLFKATRSAPEDSYTVS
GVHRKTKYGIECGPVVGSLDIIRQRPVDSVGRMDGSVLGSIFLTYGEKAG
VAAKAACNTSQGGPTLFDASVGAKLTEIMAHFDSQLWKTRKRLKMANTVS
TNLDPAGLNKKVDGGRMLDPTDPKAVEMMYDMLKGSVSAFGAP*
back to top

mRNA from alignment at P-littoralis_Contig738:16800..18844-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig738.3.1 ID=mRNA_P-littoralis_Contig738.3.1|Name=mRNA_P-littoralis_Contig738.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2045bp|location=Sequence derived from alignment at P-littoralis_Contig738:16800..18844- (Pylaiella littoralis U1_48)
TGGCAAGAGTCTCTAAGAGACAACCTGGCCCTGATCGGTTTTCACGTTTA CTCCCAGCTCTTCCCGAGCCTACTTGAAAATCGCATCAAATTGAACAAAG CGAGCCACCACTACAGAGACCTCGACCGCGCGACGCCCGAGGGCAGGGAG AAAGCAGAGCAGCGCCGAGAAGCCCTCGCAAGACCCCAGCGGGTCGGCTC GGCTCATTCTGTGTTTCACGGGCTCCCGTACTCCGTGGAGAAATCGAAGA GTATACTGCAGTTCATGAACATGGATTTTGACGACGACGATTCAAGGCAG TGGTTCTTCCTCCATCGGGAGTTCTCCGTCATTTCCGGGCAGCGAGGGGA GACCAGCTCTTCGAGCGTGTACGGATCATGCTCTTCGGCCATCGGGCTTA TGTGGTTCGCGACCGTCATCCTTGGGCGCCCCACAACCTTTGAATCGGTC GTCTTGCCCCTGAGCGTGGTGGAGCGCCGCGTGCTCGAGGAGAGGTGGCT TTGCCCCCCCTGCCACTTGGACGGCGCTATCCGCGGCTGGGAGACCGACT GGAGGGGCGTGTTTCGTGCGATAAACGTACCGCACAGAAACATAGCCTAC ATAATGTTGGAGCGGGCGTGCCAAGACAAGTACATTGAGGGGCTCCACGC AGGAGACGCGTATGGTCTTTTTAAGGCGACCCGATCGGCCCCGGGTGACG CCGAGAGGATAGCTACACTGTTTCGGGCGTACACAGAAAAACAAAGTATG GGATCGAGTGCGGACCTGTGGTTGGGAGTCTGGACATAATCCGACAGCGG CCCGTGGACTCTGTCGGCCGCATGGACGGCTCCGTGCTGGGTTCCATATT TTTGACGTATGGAGAGAAAGCAGGCGTCGCGGCGAAGGCTGCTTGCAACA CATCGCAAGGCGGCCCAACGCTCTTTGACGCTAGTGTCGGTGCGAAACTG ACGGAGATCATGGCGCACTTCGACAGCCAGCTTTGGAAAACGAGGAAAAG GCTCAAAATGGCAAACACCGTCAGCACCAACCTGGACCCCGCCGGTCTCA ACAAGAAGGTGGATGGCGGGCGTATGTTGGATCCCACGGACCCCAAGGCG GTGGAGATGATGTACGACATGCTCAAAGGGTCTGTTTCGGCGTTTGGCGC CCCCTGAAGAGCCTGATCGGTGAGGAACTCGGGGCAAGCATGGAAAACCC CTCTGCACTTCTGCAAATTTCCGACCACGAGGCCGAGCGGCTGTACGAGC ACGCTAAGAATAAGGGTGTGCAATACTCCGACGTAGCCAATCTGTGCGTC TTACTCGCGCTAGGCAATTCTTTTCAGAGATCCCAGGAATGCGCGAGGCA ACGATGAACGAGTTCGCTCTTGTTCCGGACGGCACCCACTTCAAGCAGAC TTTCAAGGACCGAACGAACAAGACGGCTATCGCCTCAGCGTCGAGTGGGG CTCTTCCCGTTAGTCACTTTAAAATGTCAGCAGGCCAAAGCATGATGATA CATTTTATAGCTTGTGTGGGCCACCGCTTCTACGACGTAGACATGCGCGA CGGCAACAGGAAGCTGTTTGTCAATTCGAAGGGAGAAGGGTGGACCCCAA ACGACACTCGGTCGCGTTTCAAAAAGATTGGGGCGTACTGGCTAGGTATT GAAAACTTCTCTCCCCATGTGTGCCGTACGTTTTGGGCCACACACGCCCT GAATTCGGGCCAAGTCAATAGCAGTAATATCGATGACTTGAGCTCCTATC TCCAGGTGTCGAGTGTCACGTTAGGTAGCTATGCAGCTGCCTCCCTGCAA ACACAGCTGCCCACAAAATAGGCAACGACGTGCTGGGTGGATTAGTCGAC TCGGCTTGCGCGGTAGAAACTACAGAGAAAGTACCCGAACCGTATGGCAA GAAAAGGAACGCAAGTAGGATGGAGTTCATAGGAGACATTCGTGCGTCTC TACACGAGTACGGGGGTGATGTCAGACTCATGTTTCGTGATTTGGTGAAA AAGCGTAAAGTTGGTCAGCTCGGAGAGGGGGAATACGTTTTTAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig738:16800..18844-

>mRNA_P-littoralis_Contig738.3.1 ID=mRNA_P-littoralis_Contig738.3.1|Name=mRNA_P-littoralis_Contig738.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=882bp|location=Sequence derived from alignment at P-littoralis_Contig738:16800..18844- (Pylaiella littoralis U1_48)
ATGAACATGGATTTTGACGACGACGATTCAAGGCAGTGGTTCTTCCTCCA
TCGGGAGTTCTCCGTCATTTCCGGGCAGCGAGGGGAGACCAGCTCTTCGA
GCGTGTACGGATCATGCTCTTCGGCCATCGGGCTTATGTGGTTCGCGACC
GTCATCCTTGGGCGCCCCACAACCTTTGAATCGGTCGTCTTGCCCCTGAG
CGTGGTGGAGCGCCGCGTGCTCGAGGAGAGGTGGCTTTGCCCCCCCTGCC
ACTTGGACGGCGCTATCCGCGGCTGGGAGACCGACTGGAGGGGCGTGTTT
CGTGCGATAAACGTACCGCACAGAAACATAGCCTACATAATGTTGGAGCG
GGCGTGCCAAGACAAGTACATTGAGGGGCTCCACGCAGGAGACGCGTATG
GTCTTTTTAAGGCGACCCGATCGGCCCCGGAGGATAGCTACACTGTTTCG
GGCGTACACAGAAAAACAAAGTATGGGATCGAGTGCGGACCTGTGGTTGG
GAGTCTGGACATAATCCGACAGCGGCCCGTGGACTCTGTCGGCCGCATGG
ACGGCTCCGTGCTGGGTTCCATATTTTTGACGTATGGAGAGAAAGCAGGC
GTCGCGGCGAAGGCTGCTTGCAACACATCGCAAGGCGGCCCAACGCTCTT
TGACGCTAGTGTCGGTGCGAAACTGACGGAGATCATGGCGCACTTCGACA
GCCAGCTTTGGAAAACGAGGAAAAGGCTCAAAATGGCAAACACCGTCAGC
ACCAACCTGGACCCCGCCGGTCTCAACAAGAAGGTGGATGGCGGGCGTAT
GTTGGATCCCACGGACCCCAAGGCGGTGGAGATGATGTACGACATGCTCA
AAGGGTCTGTTTCGGCGTTTGGCGCCCCCTGA
back to top