|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 389 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 387 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791522.914578-CDS-P-littoralis_Contig737:68321..68525 | 1680791522.914578-CDS-P-littoralis_Contig737:68321..68525 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig737 68322..68525 - |
| 1680791522.9292681-CDS-P-littoralis_Contig737:68815..68923 | 1680791522.9292681-CDS-P-littoralis_Contig737:68815..68923 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig737 68816..68923 - |
| 1680791522.9396477-CDS-P-littoralis_Contig737:73226..73301 | 1680791522.9396477-CDS-P-littoralis_Contig737:73226..73301 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig737 73227..73301 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig737.23.1 >prot_P-littoralis_Contig737.23.1 ID=prot_P-littoralis_Contig737.23.1|Name=mRNA_P-littoralis_Contig737.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=129bp
MQQIQDKAAETYSATTDGLIKNAAVAITSAVGSLRGATTRSATINKQLEA
AASRAEKVMDKIPSVTSAMGEAGGATATSQPGLAGGVSSTPSTSIDPMTN
GPLLGAIDSLIVDNLKAMVPLINNTLPQV back to topmRNA from alignment at P-littoralis_Contig737:68322..73301- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig737.23.1 ID=mRNA_P-littoralis_Contig737.23.1|Name=mRNA_P-littoralis_Contig737.23.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4980bp|location=Sequence derived from alignment at P-littoralis_Contig737:68322..73301- (Pylaiella littoralis U1_48)
ATGCAGCAGATTCAAGACAAGGCGGCCGAAACGTACTCGGCCACGACAGA
CGGGCTCATCAAAAATGCTGCGGTGGTAAGACGATGTAGTCTGGACTTTT
TCAAATTTAAAACTTACGAACACATCAGTGAGTTCGCCTCTCTCCAGACG
AGGATCTGGAGTAGTAGGTCATCATCTATCAGTGTTTCTAGAACTCATCA
GACATAGTACCGTTGCAGCTCCCCTGAGGGCGTCAGGCTCAAGAAGACAA
TTTGGTGGTCGCCTTGTGTGACACGCGTTACGTCATGTGTTGAGTGTTTT
CAGTCTCTACTGGTGCTGTTTGCATCATCCTTGGCATAGTAGTTGTGGTG
TTTTATTTGAGCTTATGCTACTCCTTGGATTAGATTTTGAGTCCCTGCAT
ACAACAACACAGCAGCTCTGTTGGATATACTCGTAGCATGGCATGATGGA
TGGATATTGGATACAGATCTACGGAGACTGCGTTCCGTTGGTTTCTGGGT
ATCACGGAATTTCGGTGTACTTTCCTTTGTGAATCTTGTCATCTCGGAGA
TTCGATTCGTGTGATTGCGTGATGTGATTGCGCCGCGTTCGCGACTCTCT
CCTTTTCTGGTAGCTGTGTGCCCCCCCTCGAAGGAGGTTGATAATACAAG
CTCTTCATCCCAGGCCGTGTTGGCCGGATTGCTCTCTACTCCACACAACC
CCAAGCTTAGCTTACCCCCAGTATCGAACACGCTAGCAAAGACACGTCGT
CCACGATATGCGGGTCTAGCTTTGCTAGTCGGGGATTCATTTCGCTGTGA
GGGCGACGGAACTATGGAGATCAGGATGATCGTGAGCTGCATGCAAAAGA
AGACCACGCCACAGCAGCAGCCGCTGTTCAAGCAGCAACAGCAGCAACAG
CAGCACGTCGCCTACTAGGGTCCTAGACCCGCTCAGGCACGTGACGACAT
GCTCATGCTTTTCATCTGCCCGGCTTTGACTTGGACTTGTTGTTTTGTGT
TTTCAGAAGCTGTGATTCTGGATTGAGATTTGGTCTTGCCCTTTGGTTCA
TGTTCTGACCTTTTGTCACTGATTGTTATTTTTCGGTCATGACTGCTGTA
CGATCTGACATGACATGTGTGTCGTGAACGAACTAGGAATTGGGGTGTTC
AAGCGAATGAGGATACGAAGAACTAAGTGTGTGTGTGATGGTTTTCAAGC
CAACAAAATCACTGCGGTGGGGATCTGCCGCCATTGGAACGGTTGCCAGT
ATACGAGCAAAACTGACAAACAAACAGAAACGAGAATGGAGTGGGAATTT
CATCGTACCGTGAGAGATCATAGCAAGTTTGTAAGAGGGTGGGTGAAAAT
TGACGGTAGAGAACTGCAGTTTACCGAAACAGGACCTCAGCTAAAAGCGA
GACTTCACTTTATATTTACAGAAGAGTCGGTCGCGGGTTAAATCCCCGCC
ATGCACTATTGCGCTTATTCCATTCCACCAGAGCAAAACTGGGAACTCGG
GGAAGCAAAAGCAGCAAAGGTATGACCTCTTTGCATCAGATAAACTGGGA
ACTGAGTAGACGAGTCACCGTAATACTTTCGATTTTTTTTAAGAGTCATC
AGCAAGAAGCGAGGCATGGTTCTCAAACGAGTTCCCCGACAAACATAGGT
CCCAAACCATAGCAATGGCAGACCACGAACAAACTTTGATTTCATCACCA
ATAGAGAACTTCCGATTTTTTTTCTTTTAGCAGTCATCTTTATACTGTGC
AAAACCGGCGGGGGGTATGATGGAAGAATTGGTAGTGTATGATTTTCCCC
GGTAATAGGACGTACTGTAGTGATGTTGATTTTATGGCACCCTGATTTAT
TTATTTTGTTGTGTCCCTTTGATTTTTGTGGAATGTGTGATTACAAGTAA
TCGTGCCACCATCATTCCTCCGAACGCGCGACCTGCCCCTTCATCGCCGA
GTCAATCCCCCGGGAGCGACACTTGTGCTCACCCCACCCGTAGGCGGACA
AAAATCTCACCAAGCTCGAGCCGCGGCCAGCCGGATGAACGAAAAGCGAA
AGGTGGCCGCAGCAGAGGCGAGCGTGAACCGCGGAGGGGCGGAGAAACAA
TGGCTTGGGCAACGGACAAAAGCGCTGGGTTAGATGTCAAGGCAAAAACG
TACGTAGGAAAGATTTGTTTTGAATTTGATTGATTTGTGGATTTGGATTT
TTAGGCTTGTTTTGATTTTCGGATTTTGAAGGATAAGGGTTTATTTGGTT
CTTTTGTTCTGCAGGATTTTTTCCATGTTTGAATCTTTCATATTTCGCGT
TTTACCTGCGAAAAGTAGTACTCGTCGGGCCGTATACCGTCATATTACAA
ATTATTTTGCCAGTATTGGTCCGGAAGGGCTTGATGGACCGTTCGTACTT
TTTCATAGTCCCGTCTTCGAGCGTTGAGTCTTTGCGCGAACTTTTGCGAT
GCATGTGTTGAATAGCATTGAGAAGTTTTCTTTCAGGGACTGCTGTTGGA
ATTAAATGTAAAGCAACTGCTGATCAACTGCTCCGAAAAATCATGGGGGG
GTTGATGTGATCTTGACATGATTTCTCTCATAGCTAGTCACAGCAGTTGG
TACAGGCAATAATTTGTTTGCAAATAAGGCACGTGATCGCGTTTTCACTA
CTGCAATAATTTAAATTTGAAGGTTGTAGGATATTTCCCAAATTTTGGTT
CAGGTTCGTTCCGGGACGCTACGACGGCAGGGGGGCCGTAAGCGGATGAA
TATGACATGAAGGGACTCTGTTCTTCATGATATGAAGTGGAGATTTCCTT
TCATCTTTTAACATGATGATGGGCAGTCTACGAAAATCTCCGTACTTTTG
TTTGCTTTGTTTTCAGTTTGTTTATTCCGTGCGGCATGTGATGGTGCTTC
GTGCACCCCCGATATTTTTGCGTTGGATTCTGTTCTTCTCATACTTCAGT
ACAATATTAGTCGGTAAACAACTGGTCGGAAAACTGATGGTTGGTGAGTT
TTCTAGAAGTAGTGCCGTTTGTATTTTTCGATTGATATCTTGAAGGAAGT
GTTGTTTTTGAGGCAGGTTTGGCGTTTTATGTTGCTATCAGCGGGCATGC
CTTGCATCCCAGTGTTCGAGGACAACCAGGGTGCGATTTAGATCGCCCAT
AATCCAATCACCAACTCGAACTCGAAGCACATAGACGTACGGCATCACTT
TATCAGGGAACTGGTAGAGAGGAAGGAGATTTCGATCACACACGTGACGT
CGAAATCCAATCACCAACTCGAACTCGAAGCACATAGACGTACGGCATCA
CTTTATCAGGGAACTGGTAGAGAGGAAGGAGATTTCGATCACACACGTGA
CGTCGGAATATCAGCATGCAGATTTCTTGACGAAAGCAATCAGCAGGGAG
TCTTTTGACCTGCACCGTGGTTTTGTGATGAATTTGCAATGAAGCATGAA
TTTTTGTCTCTGCGGTTGGCTTTGTTTTGAATTGCGTTTGTTTTGTTTTG
TTTGATTTTATATTGATTTTCTGGTTGATGAAAAAGGAATAAGAGAAGAC
AGGAAGAATGAATATGTTTTTATGATGGATGTTTTTGGTGTGTTGGATTT
CTTTGGATACTTCGGGATTTCGGGCAAACATTTTGTCTTGGTTGTTTTTG
ATTGAAAGTAGTACAGATAGTATTTTGTGGGGATTATTTGACTTGCCGTA
TCATGACGATGCATACGAGCAGGGGGGCTGTTGGATATACTCGTAGCATG
GCATGATGGATGGATATTGGATACAGATCTACGGAGACTGCGTTCCGTTG
GTTTCTGGGTATCACGGAATTTCGGTGTACTTTCTTTTGTGAATCTTGTC
ATCTCGGAGATTTAATTCGTGTGATTGCGTGATGTGATTGCGCCGCGTTT
GCGACTCTCTCCTTTTCTGGTAAACGTGTGCCCTCCCTCGAAGGAGGTTG
ATAATACAAGCTCTTCATCCCAGGCCGTGTTGGCCGGATTGCTCTCTACT
CCACACAACCCCAAGCTTAGCTTACCCCCAGTATCGAACAAGTTCTTCTT
CCGAAAAGATATGATGATACCCATCCATGTGAATACTACTCTCTGCTTGT
TGCCATTTGTGAGAGATAGAGTGTAAAAGTGTGATGGTGAAATTCACGCG
TTTGTCAGTGTACTGGTATTATCGCGCATATTGCTGTGATCTCGTTATGA
AGTTTCACTGCCGGTTGAGATAGGCATCACTGATTCATTTCGTGCCTGAA
GTAGGGGTACGCGCTTGCAGATTCATTCATCTTGTTTCGGTGCAAGTACA
AATGTCTTCGCAGTACAATCACCGATGCCGATTTCCTCACCACCTTTTAT
GGACCCGGCCTCTATTTCTACGACGCAGGCAATTACCTCTGCTGTAGGTT
CTCTCCGCGGCGCGACGACGAGATCCGCTACTATCAACAAGCAACTGGAA
GCGGCAGCTTCTCGTGCGGAGAAAGTTATGGACAAGGTGAACATTTAAAT
CGCGTCTATTTCAATCGTGACGTCGCCTCTTTCTGGCACGTGTGATGAAG
AAAGGCAAGCATGCCTACTCGTATTACTAGATGGCCGGCAAGTATAGGAA
GGAAGTCCTATTTTTTTGATACACGGTTCGGTTTACTCCTCTAGTCGTGC
CATCAAGCGCCGGCGTGGGAGGGTTTTTTCTGTGCTCCTCTGTCGACTTA
TGCCATGTGCGACGAACCGCTAATTTTAATCGGGACGTTTCCTCCCGTTG
TGTGTCTTCTTCTATCGTTTCGGAAGATACCTTCTGTGACTTCTGCTATG
GGAGAGGCCGGCGGGGCTACAGCCACATCGCAGCCCGGCCTTGCCGGTGG
TGTGTCCTCCACACCATCAACGTCCATAGATCCCATGACGAACGGCCCCC
TTCTTGGTGCCATCGACAGCCTGATCGTCGACAACCTCAAGGCAATGGTG
CCCCTCATCAACAATACCCTGCCGCAAGTC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig737:68322..73301- >mRNA_P-littoralis_Contig737.23.1 ID=mRNA_P-littoralis_Contig737.23.1|Name=mRNA_P-littoralis_Contig737.23.1|organism=Pylaiella littoralis U1_48|type=CDS|length=387bp|location=Sequence derived from alignment at P-littoralis_Contig737:68322..73301- (Pylaiella littoralis U1_48)
ATGCAGCAGATTCAAGACAAGGCGGCCGAAACGTACTCGGCCACGACAGA
CGGGCTCATCAAAAATGCTGCGGTGGCAATTACCTCTGCTGTAGGTTCTC
TCCGCGGCGCGACGACGAGATCCGCTACTATCAACAAGCAACTGGAAGCG
GCAGCTTCTCGTGCGGAGAAAGTTATGGACAAGATACCTTCTGTGACTTC
TGCTATGGGAGAGGCCGGCGGGGCTACAGCCACATCGCAGCCCGGCCTTG
CCGGTGGTGTGTCCTCCACACCATCAACGTCCATAGATCCCATGACGAAC
GGCCCCCTTCTTGGTGCCATCGACAGCCTGATCGTCGACAACCTCAAGGC
AATGGTGCCCCTCATCAACAATACCCTGCCGCAAGTC back to top
|