prot_P-littoralis_Contig1184.15.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1184.15.2
Unique Nameprot_P-littoralis_Contig1184.15.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length959
Homology
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: D8LB19_ECTSI (Similar to RING finger protein 122 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB19_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 1.310e-60
Identity = 357/1007 (35.45%), Postives = 444/1007 (44.09%), Query Frame = 0
Query:   18 AVREVAGAQTQVQMHLDQEVLRARVSAALG-----GSASAAPTEVTAAEALRGNPLLNALNRCSRQLARLRDTLIDAGGTERGMYEDGGMGSAVFERGRKAQSALLHAQQVADDMYHGSLAQLTDAGGAGAACQAEVLETVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCNFSGQNGGSSVGFGGASGNDXXXXXXXXXXXXTRDXXXXXXXXXXGGDLPETQRHRKCS-PRYALRNGELLAESDHATVRSAVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVFK-RGLRP--SASVTSRRSEAGAAAQRQATDIWRAAGVFSLDESPSPISGSGAPSAAWEPASTARTGTATEAAIALGLAPVTRNGVSAAAAKRGKGSVAS-RVALAGGRARXXXXXXXXXXXRKEGWS-AGTGNSESIWRDGLRQGGA----GNGKLPPTGLQ-----QHASSCSDSARFGR---SSAVLSAAAAAPATVAVTGEVSRRDAGVDHTAAAAXXXXXXXXXXXAPRKPSPTAXXXXXXXXXXXPRRSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRR-PTRQGLLNHGAATRGGGRXXXXXXXXXXXXXXXXAGGLWEAAD---------DRTLPAEGFDERAATASRDDFELSAFLGG-----GSSP--------------------PDDAVSQRGRSGRQSARQELLDRPAAGGGRRN------PADVSPGTXXXXXXXXXXXXRQSESLVRLWVPPSWQSQSVG-QLLAEAGVSPASVALGAGSGGGDDENGRASGRPCGMDEDEATAWRLAQEEQERQHQRDELLALHLAARENAGMERRASRRRVAHQG----ARRSSSPGPPLSDADXXXXXXXXXXGGGDGVSDAVRALQFQDIEADDYETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVAAGEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPTDMQAVVPDSP 955
            A  E+  A  ++Q HLD+EV +A  ++A       G    AP + T  E ++G+PLL+AL RCSRQL +LR +L+          +  G   AV   GRKAQS LLHAQQ+ADDMYHGSLAQL D   A     ++VL+TV                                         SG  G + V   GA+G+                          G   PE    R    P  A                     XXXXXXXXXXXXXXXX            GV++ +G+    S SV S RS+A AAA      +WRA     ++          A  AAW  A    T  ATE A++LGLAPVTR+ V+AAA  R + + AS RV+++G  A              EG+  AG            RQ  A    G+GK  P   Q     Q A+S  + +R  R   S+  L  AA+       +GE +   A     A A               +PS TA  XXXXXXXXX   SSR                                  R+ L+  G+       XXXXXXXXXXXXXXXX                  +R  P +  +E+   A  D+    A LG      GSSP                             RS  +S     L  P A   RR       PA    G              +S+   R      W   SV  Q+      S A+ AL   S               G+DEDEA A R A++EQE Q + DELLAL LAARE AG ERRASRRRV  +     ARR+S PG    D++            G  +SDAVRALQFQDI+ +D+ETLLALDEAGGEGGRCCAGGKGL +EA++A L+ G AAG  LEESCA+C+ ++ L DE+S LPC H FH  CIRKWLLMRNRCPT ++AV+PDSP
Sbjct:   24 AAGEIGIALVELQRHLDEEVAKATPASAXXXXXXXGETVEAPAQAT--EVIKGDPLLHALVRCSRQLTKLRHSLLAQAHGPHESLQHRGRPVAVTNDGRKAQSTLLHAQQIADDMYHGSLAQLNDPFSAETGYHSKVLDTVQSCDRANAVTASALTLVISALSGFPPHSSAPVT--------SGSGGAADV--AGAAGDGDGGAPAESRTERQPSSLATPLGNWTGS--PERIETRDAGRPVAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGSGRKSISGGGVYRNQGIHRGGSGSVRSCRSQAAAAAG--VGGLWRAGRNSGVERGTRVGGARSAAVAAWGAAPPKAT--ATEMAVSLGLAPVTRSDVAAAAEDRKRRAAASLRVSMSGAGAGGAEGV--------EGYGKAGXXXXXXXXXXXXRQDAATFQFGSGKPSPVERQRRRQQQPATSSVEGSRRDRPPTSATWLDGAASGDWLADKSGEGASSHAAAQEAAGAFG-------------RPSTTARGXXXXXXXXXXVGSSRRVASGHRSPSGSLVSARLASPERLRSAGRTALDVRRRLVAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRNRGGPPDAEEEKLVNALFDEASYRAILGNVPAANGSSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPRS-----LSAPRAVARRRGMIGFTPPAGPERGGRGPGRWDCPSTPVESDGRSR---GDGWLLSSVSSQVFRPREASAAAAALAEPS--------------QGIDEDEAAARRFAKQEQEAQAREDELLALRLAAREEAGAERRASRRRVQRRSNASSARRNSIPGYISPDSNHPAVASAA----GGNLSDAVRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLADEAMEAVLQTGKAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSP 965          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A6H5L8B3_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8B3_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 5.180e-43
Identity = 84/113 (74.34%), Postives = 99/113 (87.61%), Query Frame = 0
Query:  843 VSDAVRALQFQDIEADDYETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVAAGEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPTDMQAVVPDSP 955
            VSDA+RALQFQDI+ +D+ETLLALDEAGGEGGRCCAGGKGL EEA++AAL+AG AAG  LEESCA+C+ ++ L DE+S LPC H FH  CIRKWLLMRNRCPT ++AV+PDSP
Sbjct:  856 VSDAIRALQFQDIDENDFETLLALDEAGGEGGRCCAGGKGLAEEAMEAALQAGTAAGARLEESCAVCMEEFGLGDEISVLPCLHAFHGACIRKWLLMRNRCPTCLKAVIPDSP 968          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A6T9E0I7_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A6T9E0I7_NOCSC)

HSP 1 Score: 71.2 bits (173), Expect = 1.700e-10
Identity = 40/105 (38.10%), Postives = 55/105 (52.38%), Query Frame = 0
Query:  841 DGVSDAVRALQFQDIEADDYETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVAAGEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLL-MRNRCP 944
            DGV      L F+DI+ +DY+ LL LD+            K     A  A++    A    L E C +CL +YE+ D ++ LPC HTFH +CI +WLL  R+ CP
Sbjct:   76 DGVPSQFADLLFRDIQPEDYDLLLQLDD------------KIPRRTATKASVEGLGAVSPNLGERCTVCLTEYEMSDSVALLPCGHTFHRMCISRWLLERRSACP 168          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A5P1EDA4_ASPOF (RING-type domain-containing protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1EDA4_ASPOF)

HSP 1 Score: 70.5 bits (171), Expect = 9.060e-9
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0
Query:  854 DIEADDYETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGV--AAGEML----EESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPTDMQAVVPDSP 955
            DI+   YE LLAL+E  G          GL++E +   L+  +  ++ +M     EE CAICL +Y+  DEL  L C H FH+ CI+ WLL++N CP    A   DSP
Sbjct:  408 DIDNMSYEELLALEERIGNVST------GLSKETISGCLQEMIHCSSDQMKDDDEEEKCAICLENYDDQDELGRLSCRHDFHASCIKNWLLIKNACPICKAAAFIDSP 509          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A2Z6NG84_TRISU (RING-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NG84_TRISU)

HSP 1 Score: 62.8 bits (151), Expect = 9.710e-9
Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  902 LEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPTDMQAVV 951
            +++ C IC  +YE+DDEL  L CEH +H  CI++WL+++N CP   Q VV
Sbjct:   14 IDKKCTICQEEYEIDDELGRLKCEHCYHFQCIKQWLVLKNFCPVCKQEVV 63          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: UPI00155AECD9 (E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=Vitis riparia TaxID=96939 RepID=UPI00155AECD9)

HSP 1 Score: 67.8 bits (164), Expect = 1.140e-8
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 0
Query:  853 QDIEADD-------YETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVA---AGEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCP 944
            QD+E DD       YE L+AL E  GE  R      GL+ E + A+LR         + L + C IC ++YE +++L  LPCEH +H+ CI KWL ++  CP
Sbjct:  149 QDMEEDDIDPDQLSYEELIALGEIVGEESR------GLSMEEISASLRPYTCHSLRSKTLVDRCVICQVEYEEEEKLVALPCEHPYHADCITKWLQIKKTCP 244          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A7S4NW69_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NW69_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.430e-8
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  903 EESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNR-CPTDMQAVV 951
            EE+C +CL++YE +DE+ TLPC H FHS CIR+WLL  +  CP D Q V+
Sbjct:   13 EETCRVCLVEYEDNDEVMTLPCRHHFHSDCIREWLLNSSTACPLDGQEVI 62          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A438ETN0_VITVI (E3 ubiquitin ligase BIG BROTHER n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438ETN0_VITVI)

HSP 1 Score: 65.5 bits (158), Expect = 2.300e-8
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 0
Query:  853 QDIEADD-------YETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVA---AGEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCP 944
            QD+E DD       YE L+AL E  GE  R      GL+ E + A+LR         +   + C IC ++YE +++L  LPCEH +H+ CI KWL ++  CP
Sbjct:   84 QDMEEDDIDPDQLSYEELIALGEIVGEESR------GLSIEEISASLRPYTCHSLRSKTAVDRCVICQVEYEEEEKLVALPCEHPYHADCITKWLQIKKTCP 179          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: A0A7I8KPU5_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KPU5_SPIIN)

HSP 1 Score: 63.2 bits (152), Expect = 5.730e-8
Identity = 41/101 (40.59%), Postives = 53/101 (52.48%), Query Frame = 0
Query:  849 ALQFQDIEADD--YETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVAAGEMLEES---CAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCP 944
            A +  DI+ DD  YE L AL EA G      A  +GL++E +     +  A G +L +    C IC + YE    L TLPCEH +HS CIR WL +   CP
Sbjct:   44 ATRQDDIDPDDMNYEELQALGEAIG------AETRGLSDELISFLTPSMYATGFVLRDEHAECVICCMPYEDQAALITLPCEHHYHSDCIRPWLKINKACP 138          
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Match: D2VEK0_NAEGR (RING-type domain-containing protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VEK0_NAEGR)

HSP 1 Score: 60.1 bits (144), Expect = 7.010e-8
Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 0
Query:  899 GEMLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPT 945
            GE  ++SCA+C+ D+E  DEL  LPC H FH  C+  WL   N CPT
Sbjct:    2 GEHCDQSCAVCICDFEECDELIRLPCGHVFHKDCVSTWLNEHNTCPT 48          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1184.15.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB19_ECTSI1.310e-6035.45Similar to RING finger protein 122 n=1 Tax=Ectocar... [more]
A0A6H5L8B3_9PHAE5.180e-4374.34RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6T9E0I7_NOCSC1.700e-1038.10Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A5P1EDA4_ASPOF9.060e-939.81RING-type domain-containing protein n=2 Tax=Aspara... [more]
A0A2Z6NG84_TRISU9.710e-948.00RING-type domain-containing protein n=1 Tax=Trifol... [more]
UPI00155AECD91.140e-839.22E3 ubiquitin ligase BIG BROTHER-related n=1 Tax=Vi... [more]
A0A7S4NW69_9EUKA1.430e-856.00Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
A0A438ETN0_VITVI2.300e-838.24E3 ubiquitin ligase BIG BROTHER n=3 Tax=Vitis vini... [more]
A0A7I8KPU5_SPIIN5.730e-840.59Hypothetical protein n=2 Tax=Spirodela intermedia ... [more]
D2VEK0_NAEGR7.010e-851.06RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 906..946
e-value: 4.2E-6
score: 36.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 905..945
e-value: 8.5E-11
score: 42.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 906..946
score: 11.013978
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 892..954
e-value: 8.7E-15
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 548..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 740..759
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 798..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..709
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 623..638
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..330
NoneNo IPR availablePANTHERPTHR22937:SF65E3 UBIQUITIN-PROTEIN LIGASE RNF165coord: 169..944
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 906..944
e-value: 1.05635E-14
score: 66.9417
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 901..953
IPR045191E3 ubiquitin-protein ligase MBR1/2-likePANTHERPTHR22937E3 UBIQUITIN-PROTEIN LIGASE RNF165coord: 169..944

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1184contigP-littoralis_Contig1184:31601..42719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1184.15.2mRNA_P-littoralis_Contig1184.15.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig1184 31466..43684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1184.15.2 ID=prot_P-littoralis_Contig1184.15.2|Name=mRNA_P-littoralis_Contig1184.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=959bp
MAERIEEGGRQVGHGQVAVREVAGAQTQVQMHLDQEVLRARVSAALGGSA
SAAPTEVTAAEALRGNPLLNALNRCSRQLARLRDTLIDAGGTERGMYEDG
GMGSAVFERGRKAQSALLHAQQVADDMYHGSLAQLTDAGGAGAACQAEVL
ETVKSCDGATAVTASALSSVMNALSRQQLQQPQQQQQPQQQCNFSGQNGG
SSVGFGGASGNDNGNGNDNDNDNGTRDDSSGGGGGGDGGDLPETQRHRKC
SPRYALRNGELLAESDHATVRSAVASASAATATATAKAWSTSSGSCGSSG
SGSGGVFKRGLRPSASVTSRRSEAGAAAQRQATDIWRAAGVFSLDESPSP
ISGSGAPSAAWEPASTARTGTATEAAIALGLAPVTRNGVSAAAAKRGKGS
VASRVALAGGRARLRGGRVGVDGGRKEGWSAGTGNSESIWRDGLRQGGAG
NGKLPPTGLQQHASSCSDSARFGRSSAVLSAAAAAPATVAVTGEVSRRDA
GVDHTAAAASSAAATASAASAPRKPSPTAAAAAAAAAASAPRRSSRASGA
AEASSSTRNSKRSSRRSVSQRSRSARRPTRQGLLNHGAATRGGGRGGEGA
GAGAGAGATGGAGGLWEAADDRTLPAEGFDERAATASRDDFELSAFLGGG
SSPPDDAVSQRGRSGRQSARQELLDRPAAGGGRRNPADVSPGTAAATTTA
TTTSSRQSESLVRLWVPPSWQSQSVGQLLAEAGVSPASVALGAGSGGGDD
ENGRASGRPCGMDEDEATAWRLAQEEQERQHQRDELLALHLAARENAGME
RRASRRRVAHQGARRSSSPGPPLSDADAAAVAAAAAFGGGDGVSDAVRAL
QFQDIEADDYETLLALDEAGGEGGRCCAGGKGLTEEAVDAALRAGVAAGE
MLEESCAICLLDYELDDELSTLPCEHTFHSVCIRKWLLMRNRCPTDMQAV
VPDSPTSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR045191MBR1/2-like