mRNA_P-littoralis_Contig734.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: A0A6H5K1N0_9PHAE (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1N0_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.050e-46 Identity = 130/290 (44.83%), Postives = 164/290 (56.55%), Query Frame = 1
Query: 67 CSASDLIGYNFQ------------------VEPEPGLSLHWSVSQLPDSISFK------------------------AVSNDSNVGWLSIGFSADGNMTGSDAVVGATEEGVAEYYLGSKALPVQSAPT-VEASISLFS--DQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLLCADDQ-----NVMEDEEQPSSGIVSTEPGSTTPM-TILPSLSP-DVFTASPTVAPTSTPPPQEID----DTTSGAVPRL 768
C+AS L+GY+F+ VEP+ GLS+HW++S D +S K A+S D NVGWL+IGFS+DGNM GSDAVVG+ E GV EY LGSK LPVQ + +EASI +S +QEI+G LE+ N T LSFTRP P GKQ L + T AILLWAAG D +FGYH LGRGAF++ L C++ Q NV+E++ + TE GS P+ T PS SP VF+ SP+ AP PP TTSGA+PR+
Sbjct: 35 CAASGLVGYDFKHAVASSTSFILLLFCSAKVEPQLGLSVHWNLSPF-DEVSLKDNNNSNLTRRETCTNHVCNIRNKQAISADFNVGWLAIGFSSDGNMIGSDAVVGSIE-GVLEYDLGSKGLPVQPPLSPLEASIRPYSVDEQEITGAVLERDENVTSLSFTRPTIPEVSGKQALLAGADTSAILLWAAGSDDSFGYHF-LGRGAFSIDLACSEGQPVVEGNVVEEDVVEGDEQLGTEAGSAVPLLTEGPSTSPFTVFSVSPSSAPA---PPFTAQPAGGSTTSGALPRV 318
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: A0A6H5JMX7_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX7_9PHAE) HSP 1 Score: 100 bits (248), Expect = 7.700e-20 Identity = 63/168 (37.50%), Postives = 86/168 (51.19%), Query Frame = 1
Query: 67 CSASDLIGYNFQVEPEPGLSLHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAVVGATE-EGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLLC 567
C SDL Y F P G ++W+ D++SF + W ++GFS DG+M GSDAV+ E E V+E +L +++ V + SD E S + G++T SFTR P + KQTL EPG+ L+WA G D FGYH RG+F V L C
Sbjct: 31 CEVSDLDEYEFMHSPTHGFIIYWTHDT--DTVSFMVEAESEQ--WTAVGFSPDGDMVGSDAVIYRPEDEEVSEQFLDAQSEVVLDRDEDDRDTDELSDIEFS-----QDGDDTTFSFTRNTTPDSSLKQTLPEEPGSQIHLIWALGNDNAFGYHGQSSRGSFQVDLFC 189
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: A0A6H5K4J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J1_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 2.450e-16 Identity = 66/161 (40.99%), Postives = 85/161 (52.80%), Query Frame = 1
Query: 64 ECSASDL--IGYNFQVEPEPGLSLHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAVVGA-TEEGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLG 537
ECSAS G+ +QV PE G +L W+V I+ +AV S GWL+IG+S G M GSDAV+G + E V EY + P S P+ A QEIS + + G T L F RP++P+ GKQ LS PAI L+A G F HS +G
Sbjct: 117 ECSASSASGAGFEYQVTPEDGFTLSWTVDTDTQEITVEAVYQGS--GWLAIGWSDSGRMPGSDAVIGLPSAETVLEYDM-----PDYSTPSASAV------QEISDATITQAGGVTTLKFVRPLEPSGDGKQLLSVS--DPAIWLYAWGGSNNFVLHSVVG 262
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: D7FJ77_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ77_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 1.130e-10 Identity = 53/170 (31.18%), Postives = 81/170 (47.65%), Query Frame = 1
Query: 67 CSASDLIGYNFQVEPEPGLSLHWSVSQLPDSISFKAVSNDSNVGWLSIGF-SADGNMTGSDAVVGATEEG-VAEY-YLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLLC 567
C AS + GY+F+V PE G + W+++ I+ + V+ S+V W IGF S D ++ GSD ++G + V EY LG A + +F Q+I+ ++ + T LSF RP+ P KQ +S G L++ G D G S + V L C
Sbjct: 28 CDASAVDGYDFEVMPEDGYEIRWTLNNDTKMIAIQMVT--SSVAWAGIGFPSVDLDLVGSDVIIGLPDNSSVLEYEVLGETA----------EEVVVFEQQDITEASIVQADGSTTLSFIRPLSPGG-NKQNISYVAGDATKLIFGQGADNELGVISDVTWSGMRVDLYC 184
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: K0T574_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T574_THAOC) HSP 1 Score: 68.9 bits (167), Expect = 4.520e-9 Identity = 48/171 (28.07%), Postives = 81/171 (47.37%), Query Frame = 1
Query: 118 GLSLHWSVSQLPDSISFKAVSNDSNV-------GWLSIGFSADGNMTGSDAVVGATEEGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMK-----PTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLLCADDQNVMED 594
G ++ + ++ PD+ + V +V W+++GFS DG M GSDAV+G GV++Y + K + + + S Q ++ +++E G +T + FT+ M P G + LWA G PT GYH+ GR +FA+ L + + M+D
Sbjct: 228 GYTMKYKINVPPDTSKEECVGCTMSVEMYYDGDAWIALGFSTDGQMVGSDAVIGIPGSGVSKYVMAGKTVS-------QVTEMPESQQTLTDSSVEFDGQQTVMKFTKIMDEPDEVPIVVGDN----------MFLWAYGSSPTLGYHA--GRASFALDLSIGSETSGMDD 379
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: B5YNB8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNB8_THAPS) HSP 1 Score: 63.5 bits (153), Expect = 2.710e-7 Identity = 52/164 (31.71%), Postives = 79/164 (48.17%), Query Frame = 1
Query: 154 DSISFKAVSNDSNVGWLSIGFSADGNMTGSDAVVGAT--EEGVAEYYLGSKALPVQSAPTVEASISLFSD--QEISGTALEKV----GNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLLCADDQNVMEDEEQPSSGIV 621
D S + + WL +GFS DG+M GS+AV+GA E+ +Y LG K+ ++ SD Q + ++E V G++T + FT+ MK + S LWA G D T GYH+ GR FA++LL DD + +P++ +V
Sbjct: 356 DGCSVGMIMTYEGIAWLGLGFSNDGSMIGSEAVIGAVGAEQVPLKYTLGGKS---------SDAVQPMSDDKQTLKNASIEVVNSASGSKTIMKFTKLMKEIGEIEILTGSN-----NFLWAYGSDITLGYHT--GRSPFALNLLGEDDFPLGATFTEPTNQLV 503
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: UPI0018899EE3 (DBH-like monooxygenase protein 2 homolog n=1 Tax=Pungitius pungitius TaxID=134920 RepID=UPI0018899EE3) HSP 1 Score: 62.4 bits (150), Expect = 5.210e-7 Identity = 48/149 (32.21%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 127 LHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAV---VGATEEGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLL 564
L W +I+FK N GW+ +GF++DG MTGSD V VGA+E +YY P+ + + Q + +LE+ +T ++F RP++ +++EP T L++A G GYH L RGA V+LL
Sbjct: 39 LKWGFDNPQGNITFKLAIN--TTGWVGLGFNSDGEMTGSDIVMGGVGASESYFRDYYATGNKRPL-----------VDNQQSYTLLSLEETAGQTIMTFQRPVQLCNDEDFYITAEPLT---LIYAYGTTDDLGYHGGL-RGAKKVNLL 170
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: A0A6J2V4C6_CHACN (DBH-like monooxygenase protein 2 homolog n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2V4C6_CHACN) HSP 1 Score: 57.8 bits (138), Expect = 1.480e-5 Identity = 52/184 (28.26%), Postives = 81/184 (44.02%), Query Frame = 1
Query: 13 GSTMVSWLGSPSLGIPMECSASDLIGYNFQVEPEPGLSLHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAVVGATEEGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLL 564
GS ++S L +L + L ++ ++ + L W + D I+F+ N S GW+S+GFS +G M GSD V+G G Y + P+V+ +Q +L +V +T + F RP+ A Q S G P L++A G D YH RG ++LL
Sbjct: 2 GSLLISPLLMLALSLVAGAQEDPLFPFSEYLDHGRDVRLRWGFDKATDIITFELTVNTS--GWVSLGFSPNGGMAGSDIVIGGV--GPQGTYFTDRYAEGNELPSVDK------EQNYKLLSLTEVNGQTVMKFQRPI--AACDPQDFSVT-GIPIKLIYAYGIDDDISYHGSQ-RGTKEINLL 171
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: A0A7S0E0V6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E0V6_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 1.510e-5 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 1
Query: 37 GSPSLGIPMECSASDLIGYNFQVEPEPGL---SLHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAVVGATEEGVA---EYYLGSKALPVQSAPTV 330
G+P P C+AS GY+ VEP G+ +LHW+V+ SI + + D G++++G+S+DG M GSDAV+G A E Y S +P A V
Sbjct: 43 GAPPPSAPKTCTASSRPGYDCMVEPPGGMQGYALHWTVAGADVSILAETTAMD---GYIAVGWSSDGMMGGSDAVIGWAGHAAAYRLEGYALSNVVPDSGAQAV 143
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Match: UPI0012ED5C01 (DBH-like monooxygenase protein 2 homolog n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012ED5C01) HSP 1 Score: 55.5 bits (132), Expect = 8.910e-5 Identity = 45/149 (30.20%), Postives = 69/149 (46.31%), Query Frame = 1
Query: 127 LHWSVSQLPDSISFKAVSNDSNVGWLSIGFSADGNMTGSDAV---VGATEEGVAEYYLGSKALPVQSAPTVEASISLFSDQEISGTALEKVGNETWLSFTRPMKPTAYGKQTLSSEPGTPAILLWAAGPDPTFGYHSPLGRGAFAVHLL 564
L W I+FK V N GW+ +GFS+DG MTGSD V VG + +Y+ ++PV L Q + +L + +T ++F R ++ + ++ TP +++A G T GYH RGA V+LL
Sbjct: 39 LKWGFDNPQGIITFKLVVN--TTGWVGLGFSSDGEMTGSDIVMGGVGPSGSYFRDYHAVGDSMPV-----------LDEQQSYTLLSLTERDGQTIMTFQRSIQTCDHEDSPITD---TPIKIIYAFGTTDTLGYHGHR-RGAKEVNLL 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig734.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig734.8.1 >prot_P-littoralis_Contig734.8.1 ID=prot_P-littoralis_Contig734.8.1|Name=mRNA_P-littoralis_Contig734.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp MVSWLGSPSLGIPMECSASDLIGYNFQVEPEPGLSLHWSVSQLPDSISFKback to top mRNA from alignment at P-littoralis_Contig734:40220..43155- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig734.8.1 ID=mRNA_P-littoralis_Contig734.8.1|Name=mRNA_P-littoralis_Contig734.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2936bp|location=Sequence derived from alignment at P-littoralis_Contig734:40220..43155- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig734:40220..43155- >mRNA_P-littoralis_Contig734.8.1 ID=mRNA_P-littoralis_Contig734.8.1|Name=mRNA_P-littoralis_Contig734.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig734:40220..43155- (Pylaiella littoralis U1_48)back to top |