mRNA_P-littoralis_Contig733.23.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A6H5JLR1_9PHAE (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLR1_9PHAE) HSP 1 Score: 788 bits (2035), Expect = 1.310e-275 Identity = 427/516 (82.75%), Postives = 460/516 (89.15%), Query Frame = 3
Query: 78 MKAHAGVLRVVQLFVLLLAVQLDAFALSSAGRVNGGGGQ-SSQAASLTG--RKAAVDSSWRAAHPGIYPEPRPKVPLTVQTMSGGGADGQAAGDEADKAGMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTNPVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVA--EKREMSLNGGIVAVGVAFGILGAAVSVLETFTN 1610
M+ A VLR+VQL VLLLA+QLDAFAL+ AGR GGGQ S+QA SL G + A V SS R+A G+ PE R KVPLTVQ MSGGG GQAA +E DK+GMSASVFNLAKNILGAGMLSLP+GVAAFSDS+KAI+PA+ IA LG VSAYTFVLIGRSCA+T AESYEQSWARTVGQ++AW+PAGACVATCFAGCLAFTIIIGDSF+ALAKTFGAPALVA RSNIIMA+SA VLLPLSLLK+LKSLGFTSMLGTSGLVYTA MM IRFFDGSYAAGGKFHAL+PA GAPVF KGTNP+CFLV++SMLSTAYEAHFNAPLFYRELK+NT+PRYSKMV TSF ASV TM AVTAFGFLTFGG+SSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREM G+KPGET+NRTRWTVGLLA VTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLM K KDK VAAA A +KREMSLN GIVA GVA G+LG +SVLETFTN
Sbjct: 1 MRKDASVLRLVQLLVLLLAIQLDAFALTPAGRSAHGGGQPSNQATSLNGPGKLAGVGSSLRSAQ-GLSPESRAKVPLTVQRMSGGGEGGQAASEEGDKSGMSASVFNLAKNILGAGMLSLPNGVAAFSDSKKAIIPASLIIAVLGAVSAYTFVLIGRSCAETNAESYEQSWARTVGQRSAWVPAGACVATCFAGCLAFTIIIGDSFSALAKTFGAPALVAKRSNIIMAVSATVLLPLSLLKNLKSLGFTSMLGTSGLVYTAVMMAIRFFDGSYAAGGKFHALLPAAGAPVFDAKGTNPICFLVLVSMLSTAYEAHFNAPLFYRELKDNTVPRYSKMVSTSFLASVATMTAVTAFGFLTFGGASSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMGGAKPGETRNRTRWTVGLLAGVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMRKFKDKAVAAAAAAGQKREMSLNAGIVAAGVAMGVLGCVISVLETFTN 515
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A6S9E4U8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9E4U8_HETAK) HSP 1 Score: 380 bits (977), Expect = 9.300e-118 Identity = 206/417 (49.40%), Postives = 283/417 (67.87%), Query Frame = 3
Query: 375 ASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTN--PVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSVLETFTNFFG 1619
AS+FNL K+I+GAG+L+LP GVAAFSD+ A+ AA A+GL+SAY F LIGR CA A++Y +WA+++ KTAWLPA AC GC+ ++IIIGD+ +ALA+TFG PA++A R+NI++ ++ V+ PL LLK+LKSL FTS+LG G VYT M IR DGSY GG+F +PA P F VKG + + L+++SMLSTA+ AH+NAP FY +LK ++PRY+K+V+ SF +++ +++ AFGFLTFGG+S G++LNNY+ D L T+ARV + S++F YPL FVGLRDG+ + G ++K +VGLL T ASL L +LGFV+SFGGAL GS ++Y+FP LM + +K + +RE LN I +GV G +GA VSVL+ FT G
Sbjct: 80 ASIFNLVKSIVGAGVLALPGGVAAFSDAPGAMAAAAGLTGAMGLLSAYCFSLIGRVCAAYDAKTYFDAWAKSISPKTAWLPAFACNFKTLIGCILYSIIIGDTASALAQTFGLPAVLAARTNILLLLTGGVIFPLCLLKNLKSLQFTSLLGIGGTVYTGVAMAIRLLDGSYRTGGRFAGSIPA--QPSFNVKGGSMAQLSSLILVSMLSTAFIAHYNAPKFYHDLKEKSVPRYNKVVYASFACAILAFVSINAFGFLTFGGASLGFVLNNYSKADTLITLARVGIFCSILFGYPLVFVGLRDGMLSLAGISNPDSKTFFASSVGLLGFATLASLVLNNLGFVSSFGGALFGSMVIYIFPTLMMNAAIKDKTAKGEWEMTPQLQREQLLNSFICGLGVLLGGVGATVSVLKNFTKVLG 494
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: D7FJZ0_ECTSI (Aa_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ0_ECTSI) HSP 1 Score: 365 bits (936), Expect = 5.420e-112 Identity = 216/469 (46.06%), Postives = 302/469 (64.39%), Query Frame = 3
Query: 213 LTGRKAAVDSSWRAAHPGIYPEPRPKVPLTVQTMSGGGADGQAAGDEADKAGMSA--SVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTNPVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRG-SKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIV--AVGVAFGILGAAVSVLETF 1604
L R+ V S RAA PR ++P + G GQA E+ +G++ S+FNL KN++GAG+L++P GV AFS SR A+VP A I ALG +S Y F LIGR CA T A SY +W++T+G+KT+WLP +C A F C+A++IIIGD FA + FGAP ++A R+NI+ +SA VLLPL LLK L +L +TS++G G VYTAA+MGIR+FD SY GG+F A + PVF G L+++SMLSTA+ AHFNAP FY ELK+ ++PR++ +V +SF A++ ++ +T F +LTFGG+S +ILNN+AT+DRLAT R+A+ASS+V YPL F+G + G G S P E + + T+ LL TA + LTDLGFV SFGGA++GS +V++FP +M++ KD K + R + G V A+GVA +LG +S+ ++F
Sbjct: 17 LEKRQGWVSSRVRAAS-SQGQRPRFRIPDYLHL---GDNPGQAPQAESSSSGVTVGRSIFNLIKNVVGAGILAIPGGVTAFSQSRAAVVPTVAMIVALGGMSGYCFSLIGRVCAATGASSYGDAWSKTIGEKTSWLPTSSCTAKTFFACMAYSIIIGDVFADVLAAFGAPGVLAARTNILCLVSALVLLPLCLLKDLSALSYTSIMGVLGTVYTAAVMGIRYFDNSYVEGGRFFAGLAKDARPVFSGTGAMNSQALILVSMLSTAFVAHFNAPKFYAELKDKSVPRFNTVVGSSFAAAIGLVVIMTLFPYLTFGGASKSFILNNFATSDRLATSCRLAIASSIVGGYPLVFMGAKTGALAAVGISNPTENQRKVGTTL-LLGFFTAIGVLLTDLGFVVSFGGAVLGSALVFIFPTMMWIA---QSKKDAKWGKPLKGWRRAEIMGNYVISALGVALAVLGGGLSIKKSF 477
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A836CMH1_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMH1_9STRA) HSP 1 Score: 353 bits (905), Expect = 2.540e-108 Identity = 195/378 (51.59%), Postives = 268/378 (70.90%), Query Frame = 3
Query: 360 KAGMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKF-HALMPAGGAPVF-GVKGTNPVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRG-SKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLK 1484
KA + S+FNL KNI+G+G+L+LP GVAAFS +R A+VPA+ I LGL+S Y F LIGR+CA T A SY +WA TV KT W+P + VA F CL+++IIIGD+FAALA+TF APA +A R I+ AIS LLPL L+ L L +TS++G +G +YTA +M +R+FDGSYA GG+F +A A P+F G NP+ L+++SMLST++ AH+NAP FY ELK+ T+P+Y+ +V TSF AS++ + +T F FLTFGG SSG ILNNYA D LAT+ R+A+ +S+VF YPL F+ R+G+ G +KP +T+ R TV +L+A+T ++ L +LGFV +FGGAL+GS I+YVFPA+M++ +K
Sbjct: 26 KAEVGGSIFNLVKNIVGSGILALPGGVAAFSHARGAVVPASVLILLLGLLSGYCFSLIGRACAATNARSYGDAWAATVEPKTVWMPLSSVVAKTFFTCLSYSIIIGDTFAALAQTFAAPAWLAYRPTILSAISGVFLLPLCLMTDLSPLRYTSIVGIAGTLYTAGVMALRYFDGSYALGGRFFNAAASAAKGPLFTGSAALNPLS-LILVSMLSTSFIAHYNAPKFYHELKDKTVPKYNTVVGTSFGASILLFVVMTVFPFLTFGGHSSGLILNNYANGDNLATMCRLAIGASIVFGYPLTFITTREGVFSALGVTKPTKTQIRVA-TVAILSALTGCAMVLRNLGFVVAFGGALLGSAIIYVFPAVMWVGKCKGDMK 401
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A4D9CTY7_9STRA (Aa_trans domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTY7_9STRA) HSP 1 Score: 354 bits (909), Expect = 1.380e-107 Identity = 201/428 (46.96%), Postives = 279/428 (65.19%), Query Frame = 3
Query: 333 GQAAGDEADKAGMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAAL-AKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTNPVC---FLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSVLETF 1604
G +GD + +S + FNL KNILGAG+LSLPSGV AFS + A+VPA A +G +SAY F LI R CA K E+Y ++W ++VG+KTAW+ AC F C AF+III DSF++L T G PAL+A R+N+I+ +++ VLLPL +LKS L S+LG G V+T A++ +R DGSYA GG+FH + A P ++P+ V++SMLST++ AH+NAP FY EL+N +IP+ +K+V SF + G+LTFGG+S G ILNNYA D LA + R+A+ +S+VF YPL FVG+RDG+ + G K + +T T+ LLA V+ ++ L D+GFV S GGAL+GS I+Y+FPA++F+K + K+ +V A KRE+ LN GI A+GV I+GA VSVL+ F
Sbjct: 84 GTESGDGNKGSSVSTATFNLIKNILGAGVLSLPSGVGAFSSNPMALVPAVALTMGMGSLSAYCFTLIARVCALNKVETYGEAWEKSVGKKTAWMVPAACTFKTFCACTAFSIIIADSFSSLFGATPGFPALLAQRTNVIVWMTSLVLLPLCMLKSFAPLAPFSLLGILGTVFTGAVIALRLLDGSYAPGGQFHEAIAASLRPSLLSGSSSPLLSPMVFVLVSMLSTSFIAHYNAPKFYTELENRSIPKLNKVVKNSFNFCTAAFAFIMGCGYLTFGGASQGLILNNYAEQDVLAKMCRLAIGASIVFGYPLTFVGIRDGVLSLLGRKAPSARTQTVTTLVLLAVVSTLAVFLRDVGFVVSLGGALLGSCIIYIFPAIIFIKTMAQKVAKGEVVETPAVKREVLLNKGITALGVLLAIIGATVSVLKAF 511
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A7S2VHC0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VHC0_9STRA) HSP 1 Score: 329 bits (844), Expect = 1.110e-99 Identity = 187/407 (45.95%), Postives = 262/407 (64.37%), Query Frame = 3
Query: 390 LAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTNPVCF---LVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRW---TVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSV 1592
+ K I+G G+LSLP+G+AAF D+ A +PAA IA++G ++AY F L+GR CA T A SY+ +W TVG TAW+P +CV F LA+++++GD+F+AL +TFG +R ++ ++ VL+PL LK L SL S++G +G++YTA M +RFFDGSYA GGK A + P G KG + V ++I MLSTAY AHFNAP FY EL+NNTI R++ V TSF S++ I + A GF TFGG+S+G ILNNY+T D L +RVAVA +LVF+YPL FVG RDG EM P E + + T +LA+VTA ++K+TDL F+ SFGGA +G+ ++YV+PA+MF + N D A A+K E+ L A+G+ G +G +++
Sbjct: 1 MVKAIVGVGVLSLPAGIAAFGDAPSASIPAAILIASIGSIAAYNFSLLGRLCAMTGATSYKSAWEETVGASTAWIPGSSCVIKTFFAVLAYSMVLGDTFSALFETFGFNV---SREKALIGLTVTVLMPLCKLKDLSSLAPFSLVGIAGMLYTALAMAVRFFDGSYAEGGKLAADVAESLRPALGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELENNTIARWNTCVATSFSISILFFIGIAAMGFSTFGGASNGLILNNYSTKDSLMGFSRVAVAFALVFTYPLAFVGCRDGTLEMM-QVPKEERTDAKLNNLTYIILASVTAVAMKITDLSFIMSFGGATLGNALIYVYPAIMFRSAVKNLGDD----ATAAQKLEVKLAMAFAALGIGMGAIGTKMAL 399
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A7S2JRD2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRD2_9STRA) HSP 1 Score: 326 bits (835), Expect = 3.860e-97 Identity = 192/412 (46.60%), Postives = 264/412 (64.08%), Query Frame = 3
Query: 381 VFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSY-AAGGKFHALMPAGGAPVFGVKGT----NPVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRW---TVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSV 1592
+FNL KNI+GAG+LSLP+G+A+F ++ AI+PA A IA +G S Y F IGR CA A SY +W++TVG+ T+W+PA C + LA+++I+ D+F AL T G +R +++ + +VLLPL LLK+L SL S+LG G+ YT M IR+F G+Y AAGGKF A + P FG G +P F ++ISMLSTAY AHFNAP FY ELKNNTI RY+K+V TSF S++T + + GFLTFG +++G ILNNY+ D L +RVAVA S+VFSYPL FVG RDG+ ++ P E + + TV LL+ VT + K+ DL F+ SF GA +G+ ++YVFPA+MF + + KL DK AA AE + GI +G+ G +GA +++
Sbjct: 93 IFNLVKNIVGAGVLSLPAGIASFGNAPSAIIPATALIAVIGAASGYCFSAIGRVCAMENATSYRDAWSKTVGESTSWIPAAICTFKTSSANLAYSMILADTFKALLSTVGVNL---SRDVVLVGTTVSVLLPLCLLKNLASLAPFSLLGIVGMAYTTLAMAIRYFGGAYSAAGGKFVADVAPALQPSFGSTGAAGVLDPKAF-ILISMLSTAYMAHFNAPKFYLELKNNTIERYNKVVSTSFLLSILTFAGIASLGFLTFGANANGLILNNYSNKDTLMAFSRVAVALSIVFSYPLAFVGFRDGVIDLL-QIPSEKRTNAKLNQLTVVLLSIVTVLASKVKDLSFLLSFAGATLGNALIYVFPAMMF-RAAVKKLGDKATAAQKAEATGIM---GIAGMGIGMGFVGAKMAI 495
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: B8C604_THAPS (Aa_trans domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C604_THAPS) HSP 1 Score: 322 bits (826), Expect = 5.170e-96 Identity = 190/415 (45.78%), Postives = 263/415 (63.37%), Query Frame = 3
Query: 369 MSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGA-PVFGVKGTNPVCF---LVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRW---TVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSV 1592
MS +FN+ K ++G G+LSLP+G+AAF D+ A +PA+ IA +G ++AY F LIGR CA T A SY +W ++VG TAW+PA +CV F LA+++++GD+F+AL T G + +R ++ ++ VLLPL LLK+L SL S+ G +G++YTA M IR+FDGSY+ AL A P G KG + V ++I MLSTAY AHFNAP FY ELK+NTI R++ +V TSF + I + A GF TFGG+S+G ILNNY+T D L +RVAVA SLVF+YPL FVG RDGI EM P E + + T +L VTA +LK+TDL F+ SFGGA +G+ ++YV+PA+MF + N D A A+K E+ L A+G+ G +G +++
Sbjct: 72 MSNEMFNMVKAVVGVGVLSLPAGIAAFGDAPSAAIPASILIATIGAIAAYNFSLIGRLCAITGATSYRGAWEKSVGPSTAWIPAVSCVVKTFFAILAYSMVLGDTFSALFTTIG---MNVSRQTSLIGLTLVVLLPLCLLKNLSSLAPFSLAGIAGMLYTAVAMAIRYFDGSYSDPTSGFALDVAESLRPAIGTKGASAVFSSNAFILICMLSTAYMAHFNAPKFYLELKDNTIARWNTVVATSFSLGIAFFIGIAAMGFATFGGASNGLILNNYSTKDTLMGFSRVAVAFSLVFTYPLAFVGCRDGILEML-QVPKEERTDAKLNNLTYAILGFVTAVALKITDLSFIMSFGGATLGNALIYVYPAIMFRSAVKNMGDD----ATTAQKLEVYLATTFAALGIGMGSVGTKMAL 478
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: A0A1E7FDI6_9STRA (Aa_trans-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDI6_9STRA) HSP 1 Score: 320 bits (819), Expect = 5.630e-96 Identity = 181/407 (44.47%), Postives = 259/407 (63.64%), Query Frame = 3
Query: 381 VFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHALMPAGGAPVFGVKGTNPV---CFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTRWTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSV 1592
+FNL K I+GAG+LSLP+G+AAF+ ++PA + IA +G +SAY F LIGR CA T +SY +W+ TV +K++WLPA A CLA+++I+GD+F +L T G + +++ + + +++ VLLPL L+K+L SL S++G+ G++YTA M +R+F +Y A G F M P FG G V +++SMLSTAY AHFNAP FY LK+ T+P+Y K+V TSF S+ + + GFLTFG SSSG ILNNY+T D + ++R+AVA SLVFSYPL FVG RDG+ ++ K G K + TV LL+ +T +L + D+ FV + GA +G+G++YVFP LMF + KKV A EKRE+ L G +G+ GILG +++
Sbjct: 9 IFNLVKGIVGAGVLSLPAGIAAFASGPTGVIPAVSLIAIIGGLSAYGFALIGRCCAYTNTKSYRDAWSATVSEKSSWLPATAVTVKTICACLAYSMILGDTFVSLLSTVG---MASSKVPVTIGLTSIVLLPLCLMKNLSSLAPFSLVGSLGMLYTAVAMCVRYFGKAYTATGGFGNDMAPSLRPKFGPVGAAGVFTPSAAILVSMLSTAYMAHFNAPKFYNGLKDKTLPKYYKVVSTSFAISISIFALIASIGFLTFGSSSSGLILNNYSTRDGIMNLSRIAVAVSLVFSYPLAFVGARDGVLDLLKMK-GTAKTQNVLTVALLSGITGLALVIPDVSFVMALAGATLGNGLIYVFPFLMFRGAI-----KKKVDATKGEKREVKLAMGSAILGILMGILGTKMAL 406
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Match: K0S726_THAOC (Aa_trans domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S726_THAOC) HSP 1 Score: 325 bits (832), Expect = 1.090e-95 Identity = 200/450 (44.44%), Postives = 286/450 (63.56%), Query Frame = 3
Query: 303 VQTMSGGGADGQAAGDEADKAGMSASVFNLAKNILGAGMLSLPSGVAAFSDSRKAIVPAAAAIAALGLVSAYTFVLIGRSCADTKAESYEQSWARTVGQKTAWLPAGACVATCFAGCLAFTIIIGDSFAALAKTFGAPALVANRSNIIMAISAAVLLPLSLLKSLKSLGFTSMLGTSGLVYTAAMMGIRFFDGSYAAGGKFHAL-MPAGGAPVFGVKGTNPVCFLVIISMLSTAYEAHFNAPLFYRELKNNTIPRYSKMVFTSFFASVVTMIAVTAFGFLTFGGSSSGYILNNYATTDRLATVARVAVASSLVFSYPLCFVGLRDGIREMRGSKPGETKNRTR---WTVGLLAAVTAASLKLTDLGFVNSFGGALIGSGIVYVFPALMFLKPLMNKLKDKKVAAAVAEKREMSLNGGIVAVGVAFGILGAAVSVLETFTNFFG*AKAGML 1640
VQ +S GG +G+ GD A MS +FNL K +LG G+LSLP+G+AAF ++R A +PAAA IA++G ++AY F L+GR CA T A SY+ +W +VG+ TAW+P +CV F LA+++++GD+F+AL +TFG L +R ++ ++A VLLPL +LK L SL S+ G +G++YTA M IRFFD SYA L M P G KG + V +I+ + +AY AHFNAP FY EL++NTI R++ +V TS+ S++ I + GF TFGG+ +G+ILNNY+T D L +RVAVA +LVF+YPL FVG RDG+ EM P E + + T +L VTA +LK+TDL F+ +FGGA +G+ ++YV+PA+MF + +K AA A+K E+ L A+G+ FG++G + F+ +G AKA L
Sbjct: 50 VQGVSRGGDNGRP-GD--GTATMSNEMFNLVKGVLGVGVLSLPAGIAAFGNARSAAIPAAALIASIGAIAAYNFSLLGRLCAITGATSYKSAWELSVGESTAWIPGSSCVIKTFFAILAYSMVLGDTFSALFRTFG---LSVSREKALIGLTATVLLPLCMLKDLASLAPFSLAGIAGMLYTAVAMAIRFFDKSYANPESAFVLDMAENLKPALGDKGASAV---LIVDLHPSAYMAHFNAPKFYLELQDNTIERWNTVVGTSYGISILFFIGIAVMGFSTFGGNCNGFILNNYSTKDALMGFSRVAVAFALVFTYPLAFVGCRDGLLEMM-QVPKEERTDAKINNLTFVILGVVTAVALKVTDLSFIMAFGGATLGNALIYVYPAIMF----RSAVKSMGDAATRAQKMEVHLAMLFAAIGIGFGVVGTK----QAFS--YGSAKAKTL 479 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig733.23.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig733.23.2 >prot_P-littoralis_Contig733.23.2 ID=prot_P-littoralis_Contig733.23.2|Name=mRNA_P-littoralis_Contig733.23.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=520bp MYPAKMKAHAGVLRVVQLFVLLLAVQLDAFALSSAGRVNGGGGQSSQAASback to top mRNA from alignment at P-littoralis_Contig733:110581..125274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig733.23.2 ID=mRNA_P-littoralis_Contig733.23.2|Name=mRNA_P-littoralis_Contig733.23.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=14694bp|location=Sequence derived from alignment at P-littoralis_Contig733:110581..125274- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig733:110581..125274- >mRNA_P-littoralis_Contig733.23.2 ID=mRNA_P-littoralis_Contig733.23.2|Name=mRNA_P-littoralis_Contig733.23.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1560bp|location=Sequence derived from alignment at P-littoralis_Contig733:110581..125274- (Pylaiella littoralis U1_48)back to top |