mRNA_P-littoralis_Contig732.4.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig732.4.2
Unique NamemRNA_P-littoralis_Contig732.4.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 1.780e-87
Identity = 163/372 (43.82%), Postives = 220/372 (59.14%), Query Frame = 1
Query:   76 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            M KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++ +  T+++CF +CGLTL LDGSED
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.210e-86
Identity = 162/373 (43.43%), Postives = 221/373 (59.25%), Query Frame = 1
Query:   73 VMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+  T+++C K+CGLTL LDGSED
Sbjct:  194 VMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 2.800e-86
Identity = 171/405 (42.22%), Postives = 229/405 (56.54%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF+  T +                         G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W+ ++  T+ +CFK+CGLTL LDGSED
Sbjct:  130 DAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 5.700e-83
Identity = 162/401 (40.40%), Postives = 220/401 (54.86%), Query Frame = 1
Query:   76 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISE------------------W-----------TIRSCFKVCGLTLNLDGSED 1020
            M KLL   P   GGM +  +P +   F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+                   W           T+++CFK+CGLTL LDGSED
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSED 399          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.340e-80
Identity = 169/425 (39.76%), Postives = 224/425 (52.71%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R  YT+      RD   ++G K+  P RG VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:   63 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 3.600e-80
Identity = 171/411 (41.61%), Postives = 225/411 (54.74%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSE 1017
            + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF+                                 GG  N   P     G   +   + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++E F   L   AKT V+ + GGLT + QPLDR +NK+ KR +R +YT    S + D   RSG K+  P  G+V+TW KE W++I+  T+ +CFK+CGLTL LDGSE
Sbjct:  158 DAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 2.300e-76
Identity = 165/398 (41.46%), Postives = 216/398 (54.27%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF+                            NFGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +              T V+++ GGLTP+ QPLDR ++KE KR +R RYT ++       ++G K+  P RGLV+TW KE W  I+  T++ CFKVCGLTL LDGSED
Sbjct:  149 EVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.530e-75
Identity = 161/393 (40.97%), Postives = 216/393 (54.96%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTL 999
            ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG+ EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGL P+ QPLDR +NK+ KR +R  YT+      RD   ++G K+  P RG VATW K  W +I+   +++CFK+CGLTL
Sbjct:  130 DIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 5.810e-67
Identity = 153/401 (38.15%), Postives = 206/401 (51.37%), Query Frame = 1
Query:    1 EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTG-GETEK--------------LRYTVVLAVRGDGQKVRPRIIYKGNP---------FVGGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQ-----KVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I TG GE  +               R      VR   +  RP                 F     + G P      GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R  YT+    N  ++ +      +  P RG VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:  125 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDALGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTA----NTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 520          
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 2.090e-64
Identity = 119/272 (43.75%), Postives = 166/272 (61.03%), Query Frame = 1
Query:  280 QKLRSSLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED 1020
            + L S      +  +F  L NMDQTP+Q EMP +TT+EKTG K A ++TGGE EK R+T+VLAV  DG+KV  RII+ G PF+  T +                         G+PA G+S GVQ+ SW D  + + W +  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++          K+  P RG+V+TW K  W++I+  T+++CFK+CGLTL LDGSED
Sbjct:   33 EDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSED 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig732.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.780e-8743.82DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.210e-8643.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE2.800e-8642.22DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE5.700e-8340.40DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.340e-8039.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE3.600e-8041.61DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE2.300e-7641.46DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.530e-7540.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KYG9_9PHAE5.810e-6738.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.090e-6443.75DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig732contigP-littoralis_Contig732:10054..11710 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1020
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.49e-46
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1020
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791518.4771576-CDS-P-littoralis_Contig732:10053..103741680791518.4771576-CDS-P-littoralis_Contig732:10053..10374Pylaiella littoralis U1_48CDSP-littoralis_Contig732 10054..10374 +
1680791518.4933863-CDS-P-littoralis_Contig732:10479..105961680791518.4933863-CDS-P-littoralis_Contig732:10479..10596Pylaiella littoralis U1_48CDSP-littoralis_Contig732 10480..10596 +
1680791518.5079627-CDS-P-littoralis_Contig732:11059..111631680791518.5079627-CDS-P-littoralis_Contig732:11059..11163Pylaiella littoralis U1_48CDSP-littoralis_Contig732 11060..11163 +
1680791518.5212421-CDS-P-littoralis_Contig732:11232..117101680791518.5212421-CDS-P-littoralis_Contig732:11232..11710Pylaiella littoralis U1_48CDSP-littoralis_Contig732 11233..11710 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig732.4.2prot_P-littoralis_Contig732.4.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig732 10054..11710 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig732.4.2

>prot_P-littoralis_Contig732.4.2 ID=prot_P-littoralis_Contig732.4.2|Name=mRNA_P-littoralis_Contig732.4.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
EVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKME
KFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSL
REHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLR
YTVVLAVRGDGQKVRPRIIYKGNPFVGGTNNFGYPAGGISLGVQKSSWCD
GTQSDEWVTQDFMRRPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAK
TLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTA
PSRGLVATWVKEVWDNISEWTIRSCFKVCGLTLNLDGSED
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mRNA from alignment at P-littoralis_Contig732:10054..11710+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig732.4.2 ID=mRNA_P-littoralis_Contig732.4.2|Name=mRNA_P-littoralis_Contig732.4.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1657bp|location=Sequence derived from alignment at P-littoralis_Contig732:10054..11710+ (Pylaiella littoralis U1_48)
GAGGTGGAGGTGGCCATAGTGGACGAGATCAACACGCTCAGGAAAAACGG TGCTGCTGTGACCCGGGACCTCGTCATGGCCAAGCTTCTCTCCGAGATGC CAACCTTTTCAGGGGGCATGCCGTCCCAAGACGAGCCGGAGAAGATGGAA AAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGCA CCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGCCGGAAG GATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGCCTG CGTGAGCACGCGCAGGAAGCCGTTCTCTTGGAGAGGGCAGCCCAGGCAGC GAAGGACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAACTGCGG AGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTACAACATG GACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGAA GACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGTGTACT AAAGGTATTTCGATTGTTGAAATTCAGTTCAAACCAACATGGTGGAGATT TTCTGACGATGGAACAAGCGGGGAATTACAAATTTGCCGACGGCGGAAAA CGGGGAATTATAATATTTTGCATTGCTTCTGCCGTCACGTGCACGCTTTC GTTCTTCTATTGCCTGCAAGTACGGTACGTACTGCTGTATCGCCTGTCCC TTCGAACTACCGGTACACAGCGATGAAATTATTCATATGGTATTCCGCTG AAGTATTTTTTTTAATATACATTTACTTTTTATGTTGTGGTAGGCATTAC ACCCCAGGAGTTAAAGGTGTGTTTGTTTTTTATAATTATTTATTTTTTGT TTGTTGTGGCAGGCAATACGATTAATAATTGTACTGCTTTGCGGAGTATT TTCTTTTAACACAATTCCCTTTGTTTGCATACGCCCCAATTTTCGCACCA GGCAAGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGG ACAGAAGGTGCGGCCGCGCATCATCTACAAAGGGAACCCTTTTGTCGGGG GTACCAACAAGTCAGGCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCG TACGAGCACCTCCCAGACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGG CATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCG ACGAGTGGGTAACCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGA GATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGA AGAGAGGTTCCAAAAGAAGCTAATGGACCTGGCCAAGACGCTGGTGGTGA TGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATC AACAAGGAGTTCAAGCGAGGTGTTCGGGCCAGGTACACCAGCTGGATCCG GGACAACTACGGGCGCTCGGGGCAGAAGGTGACCGCGCCGAGCAGGGGTC TGGTCGCGACGTGGGTAAAGGAGGTGTGGGACAACATCTCGGAGTGGACC ATCCGCTCGTGCTTCAAGGTCTGCGGTCTCACCCTCAACCTCGACGGAAG CGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig732:10054..11710+

>mRNA_P-littoralis_Contig732.4.2 ID=mRNA_P-littoralis_Contig732.4.2|Name=mRNA_P-littoralis_Contig732.4.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1020bp|location=Sequence derived from alignment at P-littoralis_Contig732:10054..11710+ (Pylaiella littoralis U1_48)
GAGGTGGAGGTGGCCATAGTGGACGAGATCAACACGCTCAGGAAAAACGG
TGCTGCTGTGACCCGGGACCTCGTCATGGCCAAGCTTCTCTCCGAGATGC
CAACCTTTTCAGGGGGCATGCCGTCCCAAGACGAGCCGGAGAAGATGGAA
AAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGCA
CCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGCCGGAAG
GATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGCCTG
CGTGAGCACGCGCAGGAAGCCATCTTCGCCCTTCTGTACAACATGGACCA
GACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGAAGACTG
GTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGAGAAGCTGCGG
TACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGGCCGCG
CATCATCTACAAAGGGAACCCTTTTGTCGGGGGTACCAACAACTTCGGCT
ACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGAC
GGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGCCGCCCAGG
GTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCA
GGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACCTGGCCAAG
ACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCT
CGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCAGGTACA
CCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGGTGACCGCG
CCGAGCAGGGGTCTGGTCGCGACGTGGGTAAAGGAGGTGTGGGACAACAT
CTCGGAGTGGACCATCCGCTCGTGCTTCAAGGTCTGCGGTCTCACCCTCA
ACCTCGACGGAAGCGAGGAC
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