mRNA_P-littoralis_Contig1184.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 234 bits (598), Expect = 2.570e-69 Identity = 128/273 (46.89%), Postives = 159/273 (58.24%), Query Frame = 2
Query: 5 KVRPRIIYKGSPFVG-GTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIPTGDGVKDTVAEAAAALAAFLTHQDDSD 808
KV RII+KG+PFV T G +P KNSI++E LP R+ P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH D+ F LK ANT+V+ + GGLTP+ QPLDR NK+ KR R YT + K++ P RG VATW K W I+ T+++CFK+CGLTL LDGSEDHAWC FG YRE+ +QR EW H + L PLQLP +P A A A L DDSD
Sbjct: 280 KVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDDSD 551
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 233 bits (595), Expect = 8.280e-69 Identity = 128/274 (46.72%), Postives = 159/274 (58.03%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPFVG-GTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIPTGDGVKDTVAEAAAALAAFLTHQDDSD 808
+KV RII+KG+PFV T G +P KNSI++E LP R+ P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH D+ F LK ANT+V+ + GGLTP+ QPLDR NK+ KR R YT + K++ P RG VATW K W I+ T ++CFK+CGLTL LDGSEDHAWC FG YRE+ +QR EW H + L PLQLP +P A A A L DDSD
Sbjct: 286 KKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAGLLPRGDDSD 558
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 229 bits (584), Expect = 2.570e-68 Identity = 126/282 (44.68%), Postives = 170/282 (60.28%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPF----VGGTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAHG-IDLEPLQLPVIPTG-DGVKDTVA--EAAAALAAFLTHQDDSDEE 814
+KV PRII+KG+PF V G KS P+K NS+++E P R +PA G+S GVQ+ SW D + + W++ + RP GS + QRP +LVLDDF+CH DE F LK ANT+V+ + G LTP+ QPLDR NK+ KR R +YT + +R K+ P RG+V+TW KE WE + T+++CF +CGLTL LDGSEDHAWC FG +YR++ EQR W H + L PL+LP +P G D T A E L ++ + DS+ E
Sbjct: 166 KKVSPRIIFKGTPFTPPTVSGKGKSTLPRK---NSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVADESDSEVE 443
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5J8R4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8R4_9PHAE) HSP 1 Score: 225 bits (573), Expect = 3.440e-68 Identity = 118/252 (46.83%), Postives = 158/252 (62.70%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPF----VGGTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIPTG 733
+KV PRII+KG+PF V G KS P+K NS+++E P R +PA G+S GVQ+ SW D + + W + + RP GS + QRP +LVLDDF+CH DE F LK ANT+V+ + GGLTP+ QPLD NK+ KR R ++T + +R K+ P RG+V+TW KE WE I+ T+++CFK+CGLTL LDGSEDHAWC FG +YR++ EQ W H + L PL+LP +P G
Sbjct: 11 KKVSPRIIFKGTPFTSPTVSGNGKSTLPRK---NSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLD--LNKQMKRLLRGKHTAYSSSAVADARSGKLKPPERGIVSTWCKEEWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVPGG 256
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KQK9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK9_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.830e-67 Identity = 123/279 (44.09%), Postives = 165/279 (59.14%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPFVGGTKKS-GAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIPTG-DGVKDTVA--EAAAALAAFLTHQDDSDEE 814
QKV PRII KG+PF+ T G P KN +++E+ P R +PA G+S GVQ+ SW D + + W++ + RP GS + QRP +LVLDD +CH E F LK ANT+V+ + GGLTP+ QPLDR NK+ KR R +YT + +R K+ P RG+V+TW KE WE I+ T++SCFK+CGLTL LDGSEDHAWC FG + ++ EQ W H + L PL+LP +P G D T A E L ++ + DS+ E
Sbjct: 47 QKVLPRIIVKGTPFIPPTVSGKGKSTLPRKNYVAWENHPANRAEHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDVKCHKYEGFIAALKRDANTMVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSTSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKSCFKICGLTLALDGSEDHAWCDHDFGEDSHDLLEEQHAVWLAEHPDVTLPPLKLPKVPGGFDSNPITAAQKEVEGKLLPYVADESDSEVE 324
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.950e-66 Identity = 113/246 (45.93%), Postives = 152/246 (61.79%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPFVGGTKKS-GAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSREKVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIP 727
+KV RII+ G+PF+ T G P KNS+++E P R +PA G+S GVQ+ SW D + + W + + RP GS + QRP +LVLDDF+CH DE F LK ANT+V+ + GGLTP+ QPLDR NK+ KR R++YT + K+ P RG+V+TW K WE I+ T+++CFK+CGLTL LDGSEDHAWC FG +YR++ EQ W H + L PL+LP +P
Sbjct: 100 KKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP 344
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 218 bits (554), Expect = 4.790e-66 Identity = 112/247 (45.34%), Postives = 153/247 (61.94%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPFVGGTKKS-GAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIP 727
+KV PRII+KG+PF+ T G P KNS+++E P R +PA G+S GVQ SW D + + W++ + RP GS + QRP +LVLDDF+CH DE F LK ANT+++ + GG+T + QPLDR NK+ KR R +YT + +R K+ P RG+V+TW KE WE I+ T+++CF +C LTL LDGSEDHAWC FG +YR++ GEQ H + L PL+LP +P
Sbjct: 27 KKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQ-QRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHAWCEHNFGEDYRDLLGEQHAVRLAEHPDVTLPPLKLPKVP 272
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 221 bits (562), Expect = 6.520e-64 Identity = 123/274 (44.89%), Postives = 155/274 (56.57%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPFVG-GTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEWEQAH-GIDLEPLQLPVIPTGDGVKDTVAEAAAALAAFLTHQDDSD 808
+KV RII+KG+PFV T G +P KNSI++E LP R+ P G+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH D+ F LK ANT+V+ + GGLTP+ Q LDR NK+ KR + K++ P RG VATW K W I+ T+++CFK+CGLTL LDGSEDHAWC FG YRE+ +QR EW H + L PLQLP +P A A A L DDSD
Sbjct: 291 KKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPAESTANHIEAAAKELEAELLPRGDDSD 563
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE) HSP 1 Score: 218 bits (555), Expect = 8.570e-63 Identity = 122/274 (44.53%), Postives = 157/274 (57.30%), Query Frame = 2
Query: 5 KVRPRIIYKGSPFVG-GTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEW-EQAHGIDLEPLQLPVIPTGDGVKDTVAEAAAALAAFLTHQDDSDE 811
KV RII+KG PF+ T + G +P K SI+ E LP +T+F YP G+S GVQ+ SW D + W+++ + RP GS + QR S+LVLDDFR NT V+++ GGLTP+ QPLDR +KE KR R RYT ++ + K+ P RGLV+TW KE W I+ T++ CFKVCGLTL LDGSED AWCT FG YREV +QR EW Q G+ L PLQLP + + G A L + DSD+
Sbjct: 340 KVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSSASGANPIATAEKEVTAKLLPPEGDSDD 598
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 208 bits (530), Expect = 1.570e-62 Identity = 108/232 (46.55%), Postives = 145/232 (62.50%), Query Frame = 2
Query: 2 QKVRPRIIYKGSPF----VGGTKKSGAPKKPGKNSISYEHLPEKRTSFDYPAGGISLGVQKSSWCDGVQSDEWVTQDFMRRP--GSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNTNKEFKRGFRARYTIWIRDNFGRSRE-KVSAPSRGLVATWVKEVWEGISERTIRSCFKVCGLTLNLDGSEDHAWCTSTFGANYREVFGEQREEW 676
+KV PRI +KG+PF V G KS P+K NS+++E P R +PA G+S GVQ+ SW D + + W++ + RP GS + QRP +LVLDDF+ H DE F LK ANT+V+ + GGLTP+ QPLD NK+ KR R +Y + +R K+ P RG+V+TW KE WE I+ T+++CFK+CGLTL LDGSEDHAWC G +YR++F EQ W
Sbjct: 47 KKVSPRITFKGTPFTPPTVSGKGKSTLPRK---NSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQ-QRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDHAWCEHNVGEDYRDLFEEQHAVW 274 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1184.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1184.3.1 >prot_P-littoralis_Contig1184.3.1 ID=prot_P-littoralis_Contig1184.3.1|Name=mRNA_P-littoralis_Contig1184.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp MRRPGSTPRDQRPSVLVLDDFRCHWDEKFQQKLKDLANTLVVMLGGGLTPback to top mRNA from alignment at P-littoralis_Contig1184:3882..4820+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1184.3.1 ID=mRNA_P-littoralis_Contig1184.3.1|Name=mRNA_P-littoralis_Contig1184.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=939bp|location=Sequence derived from alignment at P-littoralis_Contig1184:3882..4820+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1184:3882..4820+ >mRNA_P-littoralis_Contig1184.3.1 ID=mRNA_P-littoralis_Contig1184.3.1|Name=mRNA_P-littoralis_Contig1184.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=672bp|location=Sequence derived from alignment at P-littoralis_Contig1184:3882..4820+ (Pylaiella littoralis U1_48)back to top |