prot_P-littoralis_Contig73.82.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig73.82.1
Unique Name	prot_P-littoralis_Contig73.82.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	349

Homology

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BLAST of mRNA_P-littoralis_Contig73.82.1 vs. uniprot
Match: A0A6H5KTX5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTX5_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 4.620e-67
Identity = 181/425 (42.59%), Postives = 211/425 (49.65%), Query Frame = 0

Query:    1 SNNRVQLFDASSRKLLKVVGRRGQIRPGRMQGPEGVAFVDGRREMIVADTGNNRLQVFHIEELTMPPDDPCARPPRTRRSSGSASNDSRCR-------DLSSSSSEHSTA------------------------------------AGAGLDEDRGDESSRACLLVFAGGGEHFVGAINRRAAGESETAEGPLSQPCDVAYWRARRR-----PQRRELTEEDD-------------TAVWAWTAALPPWFRPHVGSGXXXXXXXXXXXXXXXXXXXXXXENVVRRELLSPSFPPWNSSISV-------PSREGNKK---RSGGLRSNESTRQAAAPGIYGGVVGSGEPPVGAFVVRETGYRGKLQLLYVAKTKETEEAEQAAAHENE--DAENASVSALSGDGSEE---EGSSRGGSDWMKQAAR 349
            SNNRVQLFDA++ K L  VG RGQIRPGRMQGPEGVAFVDGRREMIVADTGNNRLQ+FH+EEL  PPDDP  +P  T  SS S+S               +SSSSE  ++                                     G G D+  GD+   ACLLVFAG  E   G   RR AGESE AEGPLSQPCDVAYWR RR      P++    +                 AVWAW    P WF P+                          E   RRELL P+ PP  +           P R   KK   R    +    T Q+    I GG  G+ EP +GAFVV  TG  GKLQL ++AKTKE EEAE AAA  +E  ++E+ SVS+ SG  S E   E  S  G DWM++  R
Sbjct:    3 SNNRVQLFDATTSKFLASVGTRGQIRPGRMQGPEGVAFVDGRREMIVADTGNNRLQIFHVEELEAPPDDPGIQPDVTSFSSSSSSVSGIASMDTVDSWQTTSSSSEMPSSWERSKAPPKPPPEQDKENRPNKSGRGAGELQREAANFGQGPDDAEGDDG--ACLLVFAGE-EDAGGLRQRRVAGESEDAEGPLSQPCDVAYWRPRRTAAGEFPEKGARKKXXXXXXXXXXXXXXXXNAVWAWNPEPPRWFWPN-----------------------PEDEERARRELLLPASPPRTNPAPTSKPPAGFPPRGHTKKPIDRRSTSKDEGRTVQSRVGSIKGG--GTEEPTLGAFVVCATGVAGKLQLSFIAKTKEAEEAEDAAAKGSEIAESEDESVSSFSGRRSTEGRGEDDSSEGFDWMRRVCR 399

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig73.82.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig73.82.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KTX5_9PHAE	4.620e-67	42.59	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 301..321
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..315
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	2.120.10.30		coord: 1..73 e-value: 1.5E-10 score: 42.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig73	contig	P-littoralis_Contig73:445647..447878 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig73.82.1	mRNA_P-littoralis_Contig73.82.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig73 445647..447878 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig73.82.1 ID=prot_P-littoralis_Contig73.82.1|Name=mRNA_P-littoralis_Contig73.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp
SNNRVQLFDASSRKLLKVVGRRGQIRPGRMQGPEGVAFVDGRREMIVADT
GNNRLQVFHIEELTMPPDDPCARPPRTRRSSGSASNDSRCRDLSSSSSEH
STAAGAGLDEDRGDESSRACLLVFAGGGEHFVGAINRRAAGESETAEGPL
SQPCDVAYWRARRRPQRRELTEEDDTAVWAWTAALPPWFRPHVGSGGGRT
SSSSSSTTTPSSFSATDDENVVRRELLSPSFPPWNSSISVPSREGNKKRS
GGLRSNESTRQAAAPGIYGGVVGSGEPPVGAFVVRETGYRGKLQLLYVAK
TKETEEAEQAAAHENEDAENASVSALSGDGSEEEGSSRGGSDWMKQAAR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like