mRNA_P-littoralis_Contig73.71.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: D7G5I4_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I4_ECTSI) HSP 1 Score: 892 bits (2304), Expect = 0.000e+0 Identity = 550/651 (84.49%), Postives = 573/651 (88.02%), Query Frame = 1
Query: 397 IPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRREVELKRNQIGAIILTPTRELANQIFGVVSKFSEALDEATPLLLVGGTSVEDCLEAFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGG-GEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQELRKHSGKNAFGEAEEXXXXXXXXXXXXXXXXGESQKSGRDDDGRKRAGNSANASPAGPSKGAPSASKSKWRGATGAPCPKQRTWGTGT-AKVGG 2343
+PLF+ NKDVCVEAVTGSGKT+AFVVPAIEMILRREV+LKRNQ+GAIILTPTRELANQIFGVVSKFSEALDEA PLLLVGGTSVE+CL AFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIF++LPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSK+GG G G GQKTQATPSSLENFYIVCE EEKLAQLVGFLKARP+GEKTIVFLSTCA VDFFSK LSQL +V LGLRVE LHGRMVQKRRTAV ++G VAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAF SV+A E+L EVKGMVK DRDVLEKGTKAFISFVR YKEHQCSFIFRFNDL+L AVAR+FCLLRLPKIAELS+PAVAESFEKEKT+DFTAIKYADK REKARQKQLVRQDEEN+QRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RHQQLLEEWDDLA EERLYKK RNKKLTRE+YD ELRKHSGKNAFGE XXXXXXXXXXXXXXXX PA S+GA KW+GATGAPCPKQRTWGTG AK GG
Sbjct: 1 MPLFMCNKDVCVEAVTGSGKTLAFVVPAIEMILRREVDLKRNQVGAIILTPTRELANQIFGVVSKFSEALDEAKPLLLVGGTSVEECLAAFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFSLLPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKSGGAGAGGVPGQKTQATPSSLENFYIVCEPEEKLAQLVGFLKARPEGEKTIVFLSTCAGVDFFSKTLSQLPSVKALGLRVESLHGRMVQKRRTAV------KDG------HVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFTSVNASEILEEVKGMVKTDRDVLEKGTKAFISFVRGYKEHQCSFIFRFNDLDLAAVARAFCLLRLPKIAELSNPAVAESFEKEKTVDFTAIKYADKAREKARQKQLVRQDEENKQRAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RHQQLLEEWDDLANEERLYKKLRNKKLTREEYDHELRKHSGKNAFGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------PASSSRGA----TGKWKGATGAPCPKQRTWGTGGGAKSGG 626
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A835YKT0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT0_9STRA) HSP 1 Score: 578 bits (1490), Expect = 5.030e-195 Identity = 354/605 (58.51%), Postives = 436/605 (72.07%), Query Frame = 1
Query: 301 SFKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRREVELKRNQIGAIILTPTRELANQIFGVVSKFSEALD--EATPLLLVGGTSVEDCLEAFRKGGASILVGTPGRVEDMLNNYNVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSK--AGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQL----KAVGELGLR--VEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSD-PAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQELRKHSG 2082
+F C PALS EVL + +GF MTPVQAATIPLFL NKDVCVEAVTGSGKT+AFV+P +EM++RRE LKRNQ+GAII+TPTRELA QI VVS F+ + EA LLLVGGTSV D + AFR+ GA+ILV TPGR+ED+L+NY +FDTRELEAL+LDEADTLLDMGFA L +I LPKQRRTGLFSATQTR K LARAG+RNPATVSVAVR+ A TQATPSSL N+++ + KL LV FL+ RP K IVF TCA VD+ +L + G V LHG+MVQKRR+ V+ F++ G+L+CTDVAARGID+PDV WIVQ++PPQDP++F+HRVGR ARAG++G+S++ L P ED+YI FLA R+ P EA +L + +V+ DRD+LEKGT+AF++FVRAYKEHQC FIFRF L+LGA+A F LLRLPK+AEL PA A + + D AI + D+ RE+ARQ++L QD EN+QR XXXXXXXXXXXXXXXXXXXXXXXXX +H+ L EEWD+LA EERL+K+ R KK+T+E+Y++E+R +G
Sbjct: 2 TFAECKPALSPEVLSGIAALGFNQMTPVQAATIPLFLRNKDVCVEAVTGSGKTLAFVIPVLEMLMRRETPLKRNQVGAIIITPTRELALQIHRVVSHFAPHVGGGEARALLLVGGTSVADAVAAFRRDGAAILVATPGRLEDLLSNYALFDTRELEALILDEADTLLDMGFAAALGAILGALPKQRRTGLFSATQTRAVKDLARAGMRNPATVSVAVRATPAAXXXXXXXXXXATQATPSSLRNYHLTVAPQRKLGALVRFLRRRPDA-KVIVFTMTCAGVDYLGGLLXXXXXXXRXXGGAAAAPVVLALHGKMVQKRRSGVFDAFVAAPAGVLMCTDVAARGIDVPDVDWIVQYEPPQDPNFFIHRVGRAARAGRRGQSVSFLLPQEDSYIEFLALRRSP---QEAARRGEDALVLARARELVRADRDLLEKGTRAFVAFVRAYKEHQCQFIFRFAALDLGAMATGFALLRLPKMAELKALPAAALTTFEGGAADTRAIAFRDRRREEARQRKLAAQDAENQQRDLERDDVGLQRXXXXXXXXXXXXXXXXXXXXXXXXXK--KHEVLREEWDELANEERLFKRLRQKKITQEEYEREIRGGAG 600
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A024TZX8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZX8_9STRA) HSP 1 Score: 529 bits (1362), Expect = 1.400e-175 Identity = 316/608 (51.97%), Postives = 387/608 (63.65%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRREVEL------------KRNQIGAIILTPTRELANQIFG-VVSKFSEALDEATPLLLVGGTSVEDCLEAFR--KGGASILVGTPGRVEDMLNNYN---VFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVS-AVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSD-PAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F C P L EVL + E+GF MTPVQ+ATIPLFLTNKDV V+A TGSGKT+AFV+P +EM+ RR + K +Q+ A++L+PTRELA QI+ V FS L + LL VGGTSVE+ + A R KG S++VGTPGR+EDMLN + DT+E E L+LDEADTLLDMGF ++N+I + LPKQRRTGLFSATQT+E KALARAGLRNPATVSV + S TPS+L NFY E + KLA L+ F++++P EK IVF STCASVDFF VL+ L + V LHG+M K+R A Y F+ GLLVCTDV ARGID+PDV WI+QFDPPQDP++FVHRVGRTARAG+ G +LT L P EDAY+ FL+ RKVPL EM AS AV +L +VK + DRDV+EKGTKAFISFVR+YKEHQC FIFRF DL L VA F L +LPKI EL VA + K +D I Y DK REK RQK+L+ E++ G HQQ++EEW++L EE L+KKF+ KLT+E+Y+ L
Sbjct: 3 FSECTPPLCAEVLTGIHELGFTEMTPVQSATIPLFLTNKDVAVDASTGSGKTLAFVLPTVEMLRRRLLATQDDDVANVLSTKKYSQLMAMVLSPTRELARQIYDQAVYFFSRVLPDVHVLLFVGGTSVEEDMAAIRAAKGHVSVIVGTPGRIEDMLNRVAELAILDTKEFEVLILDEADTLLDMGFDVSINNILSKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLASNT-------------KTPSTLTNFYTAVEYDAKLATLLRFVQSKPT-EKHIVFFSTCASVDFFGAVLAHLTKAEVPDVSVVTLHGKMQPKKRIAHYDEFVQATSGLLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRSGSALTFLSPNEDAYVNFLSIRKVPLEEMNVTASAEDAVAVLEQVKALQLTDRDVVEKGTKAFISFVRSYKEHQCQFIFRFKDLNLAKVATGFALFQLPKINELRCLDNVAFTPSGVKVVD---IPYKDKAREKQRQKKLLEIAAEHK--------AEKLDRFEKKQADKKRKLAAVEDGPRRREKKKGMHQQIVEEWEELEKEEHLFKKFKRGKLTKEEYEAAL 585
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: H3G5E4_PHYRM (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=H3G5E4_PHYRM) HSP 1 Score: 522 bits (1345), Expect = 5.320e-174 Identity = 326/601 (54.24%), Postives = 416/601 (69.22%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRR----EVELKRN----QIGAIILTPTRELANQIFGVVSKF-SEALDEATPLLLVGGTSVEDCLEAFRK--GGASILVGTPGRVEDMLNNY--NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F P L E+L +GFE MTPVQAAT+PLFL+NKDVCV+A TGSGKT+AFV+P ++++ + + R+ ++ A++++PTRELA QIF KF + AL LL VGGTSV++ L R G S+++GTPGR ED+LN + +TRE E L+LDEADTLLDMGF +LN I LPKQRRTGLFSATQT+E KALARAGLRNPAT+SV V + TQ TP++L+N+Y + +++L+ L F++++ KG+K IVF STC SVDFF++VL +L G+ + V GLHG+M QK+RT Y RF S E GLLVCTDV ARGID+PDV WIVQ+DPPQDP++FVHRVGRTARAG+ G +L+ L EDAY+ FL RKVP EM + ++L VK + DRD+LEKGTKAF++FVR+YKEHQC FIFRF +L+LGAVAR FCLL+LPKI EL + + +FEK + T IK+ DK REK RQK+LV +EN R XXXXXXXXXXXXXXXXXXXX G HQQ++EEWD+LA EE+LYKK + K+T E+Y++ L
Sbjct: 1 FHDFQPPLCAEILAETDALGFEHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKAKLADGSITAPRHADLTKLVAMVVSPTRELARQIFECAEKFFAGALPGVQLLLFVGGTSVDEDLSLIRGAVGKCSVVIGTPGRTEDLLNRCVGSSVETREFEMLILDEADTLLDMGFEVSLNKILEHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN------------TQVTPTTLQNYYCLVGHDQRLSALHHFVQSK-KGQKLIVFFSTCGSVDFFTRVLEELFK-GDEAIPVVGLHGKMPQKKRTTNYDRFSSLESGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEM-TLPLDTMEDVLPNVKSFILEDRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRNVRI--NFEKT-DIKTTDIKFKDKAREKERQKKLVVIAKENEAR-------DKKNAEMREKXXXXXXXXXXXXXXXXXXXXKGLHQQIVEEWDELAEEEKLYKKLKKGKITEEEYEKVL 576
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: W7TH80_9STRA (Atp-dependent rna helicase ddx55 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TH80_9STRA) HSP 1 Score: 527 bits (1357), Expect = 7.330e-174 Identity = 315/636 (49.53%), Postives = 411/636 (64.62%), Query Frame = 1
Query: 301 SFKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRREVELKRNQIGAIILTPTRELANQIFGVVSKFSEALDEATPLLLVGGTS-VEDCLEAFRKGGASILVGTPGRVEDMLNNY-NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVC-EAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKA------------------VGEL-GLRVEGLHGRMVQKRRTAVYKRFL---SQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAF---------ASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQELRKHSGKNAFGEAE 2106
+F++ P+L + L V + F MTPVQA+TIPLFLTNKDVCVEAVTGSGKT+AFV+PA+EMILRR+ LK++++GAII++PTRELA QI V + F PLLLVGGT V D + F + GA ILVGTPGR+ D+L Y + RELE L+LDEADTLL+MGF TL +I LPKQRRTGLFSATQTRE + LARAG+RNPATV+V V ++ ++ QATP +L NF+ C EEKL +L+ FL +R + +K +VF TCA+VD+F+++L+Q A VG L G RV LHG+MVQK+R + RF S+ GG+L+CTDVAARG+D+PDV WIVQ++PPQDPS+F+HRVGRTARAG+ GRSLT L AE+ Y+ FL + VPL +E A VE VK + DR+VLE+GT+AF +FVRAYKEHQC FIFRF L+LGA+AR++ LLRLPK+ ELS +A F++ T D +I+Y DK RE AR+ +L E R R G+HQQ++EEW++L EERL+K+ R +K++RE+Y++ELR+ G + GE E
Sbjct: 16 AFQAMIPSLHERTLAAVAALNFTQMTPVQASTIPLFLTNKDVCVEAVTGSGKTLAFVIPAVEMILRRKSPLKKHEVGAIIISPTRELAKQILKVTTHFCSHTGLRPPLLLVGGTDIVGDNFKRFSQDGADILVGTPGRLHDVLERYGHAIGVRELEVLILDEADTLLNMGFKATLTAILDHLPKQRRTGLFSATQTREVRQLARAGMRNPATVAVQVVNQQT--------REVQATPQTLLNFHWTCARPEEKLGRLLAFL-SRHREKKVMVFFITCAAVDYFARILTQHPAFRRVLGTDQGEGNGKKRKVGGLQGSRVAVLHGKMVQKKRDGMLARFTQAASEGGGVLLCTDVAARGLDVPDVDWIVQYEPPQDPSFFIHRVGRTARAGRVGRSLTFLLEAEEPYVEFLRLKGVPLAALEEDEVRLPNEDPAGTGVVE---GVKALALRDREVLERGTRAFTAFVRAYKEHQCQFIFRFAQLDLGALARAYGLLRLPKMPELSHHPIAVDFQEWAT-DTRSIEYQDKKREAARKMRLAEAARE-RDRVKEQAAGRKVVRGRTGKGEEEGRVVEPGQEKRQRKKRKGKHQQIVEEWEELGREERLFKRLRQRKISREEYEKELRRR-GSDEEGEGE 636
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A485L0V9_9STRA (Aste57867_14394 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0V9_9STRA) HSP 1 Score: 519 bits (1337), Expect = 8.660e-172 Identity = 313/614 (50.98%), Postives = 386/614 (62.87%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRR------------EVELKRNQIGAIILTPTRELANQIFG-VVSKFSEALDEATPLLLVGGTSVEDCLEAFR--KGGASILVGTPGRVEDMLNNY----NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREM-----EAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAES--FEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F+ C PAL EVL ++E+GF MTPVQ+ATIPLFLTNKDV V+A TGSGKT+AFV+P +EMI RR K Q+ A++L+PTRELA QI+ V F L + LL VGGTSV+D L A R KG S++VGTPGR+EDM N ++ +T+E E L+LDEADTLLDMGF ++ +I LPKQRRTGLFSATQT+E KALARAGLRNPATVSV + + TPS+L N+Y E + KLA L+ F++ARP K IVF STCASVDFF VL+ L A +L V LHG+M K+R A Y ++ GLLVCTDV ARGID+PDV WI+QFDPPQDP++FVHRVGRTARAG+ G ++T L EDAY+ FL RKVPL M A S ++L +VK + DRDVLEKGTKAFISFVR+YKEHQC FIFRF DL+L VA FCL +LPKI EL V ++ FE + L I Y DK REK RQK+LV +E ++ G HQQ++EEWD+L EE L+KKF+ K+T+E+Y+ L
Sbjct: 3 FEECQPALCAEVLAGIQELGFTDMTPVQSATIPLFLTNKDVAVDASTGSGKTLAFVLPIVEMIRRRLHATQDDAVANVVSSKKGTQLMAMVLSPTRELARQIYDQAVFFFKRVLPDVHVLLFVGGTSVDDDLAAIRAAKGHVSVIVGTPGRIEDMFNRVASMDHMLETKEFEVLILDEADTLLDMGFDVSITNILGKLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLATDT-------------KTPSTLTNYYAAVEYDAKLATLLQFIQARPTA-KHIVFFSTCASVDFFGLVLTLLLAGQDLP--VVTLHGKMQPKKRIAHYDEYVQLPTGLLVCTDVVARGIDLPDVDWIIQFDPPQDPNFFVHRVGRTARAGRAGSAITFLSANEDAYVNFLRIRKVPLEAMPLALPSTGAPGSKEDVLAQVKALQLADRDVLEKGTKAFISFVRSYKEHQCQFIFRFKDLDLARVATGFCLFQLPKINELR---VLDNIKFETDPDLKVVDIPYKDKAREKQRQKKLVEINETHK--------AEKVERFEKKQAEKKRKAEELKDGPRRREKKKGMHQQIVEEWDELEKEEHLFKKFKRGKMTKEEYEAAL 589
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A067BKJ6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BKJ6_SAPPC) HSP 1 Score: 519 bits (1337), Expect = 1.160e-171 Identity = 312/609 (51.23%), Postives = 387/609 (63.55%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRRE----------VELKRN--QIGAIILTPTRELANQIFGVVSKF-SEALDEATPLLLVGGTSVEDCLEAFR--KGGASILVGTPGRVEDMLNNYN---VFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSA--VELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKT-LDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F C P L EVL V EMGF MTPVQAATIPLFLTNKDV V+A TGSGKT++FV+P +EM+ RR + K+ Q+ A+IL+PTRELA QI+ F S AL +L VGGTSV++ + + R KG S++VGTPGR++D+LN + + +T+E EAL+LDEADTLLDMGF ++ +I LPKQRRTGLFSATQT+E KALARAGLRNPATVSV + Q TP++L N+Y E + KLA L+ F+ ARP EK IVFLSTCASVDFF KVL L + V LHG+MV K+R A Y+ F++Q GLLVCTDV ARGID+PDV WIVQFDPPQDP++FVHRVGRTARAG+ G +LT L EDAY+ FL RKVP+ +M+ A +++L +VK DRDVLEKGTKAFISF+R+YKEHQC FIFRF DL+L VA FCL +LPKI EL ES + E + I Y DK REK RQ +LV E++ G HQQ++EEWD+L EERLYKKF+ K+++ +Y+ L
Sbjct: 3 FDECQPPLCAEVLAGVAEMGFTDMTPVQAATIPLFLTNKDVAVDASTGSGKTLSFVLPIVEMLRRRSQATTDDDAANIATKKQVTQLMAMILSPTRELARQIYDCACFFFSRALPSVQVILFVGGTSVDEDMASIRAAKGRMSVIVGTPGRIDDILNRVSTMGILETKEFEALILDEADTLLDMGFEMSITAILGRLPKQRRTGLFSATQTQEVKALARAGLRNPATVSVQLA-------------VDQKTPTTLTNWYAEVEYDAKLAALIQFVAARPN-EKCIVFLSTCASVDFFGKVLEMLLPE----IAVVSLHGKMVPKKRIAFYEAFVNQSAGLLVCTDVVARGIDLPDVDWIVQFDPPQDPNFFVHRVGRTARAGRNGSALTFLSANEDAYVNFLRIRKVPVAKMDDLIVDDAKRLDVLEKVKAFQMTDRDVLEKGTKAFISFLRSYKEHQCQFIFRFRDLDLARVAVGFCLFQLPKINELR---ALESIQFEPAGVKVVDIPYKDKAREKQRQAKLVAIAAEHK--------AEKLQNFEKKQEKKRKELEAKTDGPRRREKKKGAHQQIVEEWDELDREERLYKKFKRGKISKAEYEDAL 582
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A2D4C6T9_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6T9_PYTIN) HSP 1 Score: 519 bits (1337), Expect = 1.810e-171 Identity = 330/600 (55.00%), Postives = 422/600 (70.33%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRR----EVELKRNQIG---AIILTPTRELANQIFG-VVSKFSEALDEATPLLLVGGTSVEDCLEAFRK--GGASILVGTPGRVEDMLNNY--NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F+ P L +E+L + E+GF MTPVQAAT+PLFL+NKDVCV+A TGSGKT+AFV+P ++++ R ++ + I A++++PTRELA QI+ V+ F AL LLVGGTSVE+ L+ R G ++VGTPGR+ED+L+ + +TRE E L+LDEADTLLDMGF ++N I + LPKQRRTGLFSATQT+E KALARAGLRNPAT+SV V + TQ PS+L+NFY + E +++L+ L FL + + K IVF STC++VDFF +VL L + V LHG+M QK+RT Y+RF+ GLLVCTDV ARGID+PDV WIVQ+DPPQDP++FVHR+GRTARAG+ G +L+ L EDAY+ FL RKVP +E+ S ++L +K + DRD+LEKGTKAFISFVR+YKEHQC FIFRF DL+L +VAR F LL+LPKI EL D + F+ + +D T IK+ DK REK RQK+L + QR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G HQQ++EEWD+LA EE L+KKF+ K+T E+Y++ L
Sbjct: 3 FREFQPPLCEEILAQIDELGFTHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKTRLADGSIKAPKTDIAKLLAMVISPTRELARQIYECAVAFFQRALPAVEVQLLVGGTSVEEDLKTIRAAIGKCFVVVGTPGRIEDLLSRTGGSTVETREFEMLILDEADTLLDMGFEVSINKILSYLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN------------TQIIPSTLDNFYAIVEHDQRLSALHHFLSDK-RDRKAIVFFSTCSAVDFFGRVLELLYEGDKDQFPVVALHGKMPQKKRTRHYERFVEMSAGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRIGRTARAGRSGSALSFLSANEDAYVNFLKIRKVPCQELSLPVD-SMEDVLPRLKSWILSDRDLLEKGTKAFISFVRSYKEHQCQFIFRFKDLDLASVARGFSLLKLPKINELRDIKI--KFDVDPAVDTTQIKFKDKAREKERQKKLAEIAKLKEQREDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GMHQQIVEEWDELANEEALFKKFKKGKITEEEYEKAL 585
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A8K1CU56_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU56_PYTOL) HSP 1 Score: 518 bits (1334), Expect = 4.780e-171 Identity = 325/600 (54.17%), Postives = 421/600 (70.17%), Query Frame = 1
Query: 304 FKSCWPALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRREVE-------LKRNQIGAIILTPTRELANQIFGVVSKF-SEALDEATPLLLVGGTSVEDCLEAFRK--GGASILVGTPGRVEDMLNNY--NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
F+ PAL +E+L + MGF MTPVQAAT+PLFL+NKDVCV+A TGSGKT+AFV+P ++++ + + +++ +++++PTRELA QI+ F + AL + LL VGGTSVE+ L R G ++VGTPGR+ED++ ++ + RE E L+LDEADTLLDMGF ++N I + LPKQRRTGLFSATQT+E KALARAGLRNPAT+SV V + TQ PS+L+NFY + E++L+ L FLK + K +K IVF STC++VD+FS+VL L E V LHG+M QK+RT Y+ F+ G+LVCTDV ARGID+PD+ WIVQ+DPPQDP++FVHR+GRTARAG+ G +L+ L EDAY+ FL RKVP +E+ + + ++L +K V DRD+LEKGT AFISFVR+YKEHQC FIFRF DL+LGA AR F LL+LPKI EL + VA FE + ++D T IK+ DK REK RQK+L +E +R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G HQQ++EEWD+LA EE LYKK + K+T E+Y++ L
Sbjct: 3 FREFKPALCEEILAEIDSMGFTHMTPVQAATLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKNKLADGTITTPKTNISKLLSMVISPTRELARQIYECACAFFARALPQVQVLLFVGGTSVEEDLRIIRNAVGKCCVVVGTPGRIEDLMGRTIGSMVEAREFEMLILDEADTLLDMGFEVSINKILSHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN------------TQIIPSTLDNFYAIVGHEQRLSALHHFLKDK-KEQKVIVFFSTCSAVDYFSRVLEMLYEK-EKTFPVVALHGKMAQKKRTKNYESFVELNAGMLVCTDVVARGIDLPDIDWIVQYDPPQDPNFFVHRIGRTARAGRSGSALSFLSANEDAYVNFLQIRKVPCQEL-SLPLETMEDVLPRLKKWVLEDRDLLEKGTNAFISFVRSYKEHQCQFIFRFKDLDLGAAARGFALLKLPKINELRNIKVA--FEADPSVDTTQIKFKDKAREKERQKKLAEIAKEKEEREQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKKGMHQQIVEEWDELANEEMLYKKLKKGKITEEEYEKAL 585
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Match: A0A662XKP9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKP9_9STRA) HSP 1 Score: 513 bits (1322), Expect = 1.920e-169 Identity = 321/596 (53.86%), Postives = 410/596 (68.79%), Query Frame = 1
Query: 319 PALSQEVLEVVKEMGFESMTPVQAATIPLFLTNKDVCVEAVTGSGKTIAFVVPAIEMILRR----EVELKRN----QIGAIILTPTRELANQIFGVVSKF-SEALDEATPLLLVGGTSVEDCLEAFRK--GGASILVGTPGRVEDMLNNY--NVFDTRELEALVLDEADTLLDMGFAGTLNSIFAILPKQRRTGLFSATQTRETKALARAGLRNPATVSVAVRSKAGGGEAGTAGQKTQATPSSLENFYIVCEAEEKLAQLVGFLKARPKGEKTIVFLSTCASVDFFSKVLSQLKAVGELGLRVEGLHGRMVQKRRTAVYKRFLSQEGGLLVCTDVAARGIDIPDVAWIVQFDPPQDPSYFVHRVGRTARAGKKGRSLTLLCPAEDAYIPFLANRKVPLREMEAFASVSAVELLGEVKGMVKGDRDVLEKGTKAFISFVRAYKEHQCSFIFRFNDLELGAVARSFCLLRLPKIAELSDPAVAESFEKEKTLDFTAIKYADKVREKARQKQLVRQDEENRQRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHQQLLEEWDDLATEERLYKKFRNKKLTREQYDQEL 2067
P L E+L MGFE MTPVQA T+PLFL+NKDVCV+A TGSGKT+AFV+P ++++ + + R+ ++ A++++PTRELA QIF +F + AL LL VGGTSV++ L R G S++VGTPGR ED+LN + + RE E L+LDEADTLLDMGF +LN I LPKQRRTGLFSATQT+E KALARAGLRNPAT+SV V + TQ TP++L+N++ + +++L+ L F ++ KGEK IVF STC +VDFF++VL +L G+ V GLHG+M QK+RT Y RF + E GLLVCTDV ARGID+PDV WIVQ+DPPQDP++FVHRVGRTARAG+ G +L+ L EDAY+ FL RKVP EM A ++L VK ++ DRD+LEKGTKAF++FVR+YKEHQC FIFRF +L+LGAVAR FCLL+LPKI EL + + + + KT D IK+ DK REK RQK+L +EN R XXXXXXXXXXXXXXXXXXXXXX G HQQ++EEW++LA EE+L+KK + K+T E+Y+ L
Sbjct: 8 PPLCAEILAETDAMGFEHMTPVQAVTLPLFLSNKDVCVDACTGSGKTLAFVLPIVQLLKSKLADGSITAPRHADVSKLVAMVISPTRELARQIFECAERFFARALPSVQLLLFVGGTSVDEDLGLIRGAVGKCSVVVGTPGRTEDLLNRCVGSSVEAREFEMLILDEADTLLDMGFEVSLNKILGHLPKQRRTGLFSATQTQEVKALARAGLRNPATISVQVANN------------TQVTPATLQNYFCLVGHDQRLSALHHFATSK-KGEKLIVFFSTCGAVDFFARVLEELFK-GDAAFPVVGLHGKMPQKKRTTNYDRFSALESGLLVCTDVVARGIDLPDVDWIVQYDPPQDPNFFVHRVGRTARAGRSGCALSFLSSNEDAYVNFLKIRKVPCEEMTLPLETMA-DVLPAVKTLILADRDLLEKGTKAFMAFVRSYKEHQCQFIFRFKELDLGAVARGFCLLQLPKINELRNVRIDFTKAEVKTTD---IKFKDKAREKERQKKLAAIAKENEAREKKDAEMRDKXXXXXXXXXXXXXXXXXXXXXX------GLHQQIVEEWEELAEEEKLFKKMKKGKITEEEYESVL 579 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.71.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig73.71.4 >prot_P-littoralis_Contig73.71.4 ID=prot_P-littoralis_Contig73.71.4|Name=mRNA_P-littoralis_Contig73.71.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=806bp QDGAVSSREGRTETESSNNSGCERKEPLRTACPDSLAAYRMLLVQSVNTTback to top mRNA from alignment at P-littoralis_Contig73:391254..410027- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig73.71.4 ID=mRNA_P-littoralis_Contig73.71.4|Name=mRNA_P-littoralis_Contig73.71.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=18774bp|location=Sequence derived from alignment at P-littoralis_Contig73:391254..410027- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig73:391254..410027- >mRNA_P-littoralis_Contig73.71.4 ID=mRNA_P-littoralis_Contig73.71.4|Name=mRNA_P-littoralis_Contig73.71.4|organism=Pylaiella littoralis U1_48|type=CDS|length=2418bp|location=Sequence derived from alignment at P-littoralis_Contig73:391254..410027- (Pylaiella littoralis U1_48)back to top |