prot_P-littoralis_Contig73.34.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig73.34.3
Unique Nameprot_P-littoralis_Contig73.34.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length441
Homology
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BLAST of mRNA_P-littoralis_Contig73.34.3 vs. uniprot
Match: A0A6H5KFE1_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFE1_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 3.940e-56
Identity = 140/295 (47.46%), Postives = 170/295 (57.63%), Query Frame = 0 
Query:  116 VRDIVVVGAGVAGLASAACLARIGLRVTIAEIRGQDRWGHDREERGARVGVGGTAAGKRAKHKEPAALEK-NGVSNTRDDAIDPGVGIWTHGLACLDELGILQQLEAEGRYMGEAGYRSACGNWLATPSQPLGEYASRDE------AGANGGESRDGALFGGXXXXAGDNSASVLFVRESKLIEALQSALPDNTRFVQARVEDIARASGSGKGGGVCSG--RGTAAGRFCAAAAATTSIGPAGSRTGXXXXXXXXXXXXXXXXGGRWTQEFDLLVGADGPESFVRDMVMVMSSPG 401
            + D+VVVGAGV GLA+AACLAR+GLRVT+A  +G               GVGG         K  AA E  +  S+    +IDPGVGIWTHGLACL+ LG+L+QLE+EGRYMGEAGYR   GNWLATP++PL E  +         +  +GG+S DG L G XXXX     ASVLFVRESKL+EAL+S LP  T+FV+  VEDI    G+       +G  RGT +GRFCAA A                              G W  +FDLLVGADG  SFVRD V++ +  G
Sbjct:   62 IGDVVVVGAGVGGLATAACLARLGLRVTVAAGKG---------------GVGGGRDIATTGEKTKAAAESMDRSSSATGGSIDPGVGIWTHGLACLESLGVLRQLESEGRYMGEAGYRDTAGNWLATPTRPLQERGAASMRRGQPCSDESGGKSEDGRLGGXXXXXXXXXXASVLFVRESKLMEALRSVLPAETKFVEGDVEDINWECGASNDDAGVAGKSRGTVSGRFCAAGAGD----------------------------GGWEADFDLLVGADGSHSFVRDRVILAADAG 313
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BLAST of mRNA_P-littoralis_Contig73.34.3 vs. uniprot
Match: D7G5G3_ECTSI (Monooxygenase FAD-binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G3_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 2.250e-25
Identity = 64/118 (54.24%), Postives = 80/118 (67.80%), Query Frame = 0 
Query:  189 SNTRDDAIDPGVGIWTHGLACLDELGILQQLEAEGRYMGEAGYRSACGNWLATPSQPLGEYAS----RDE--AGANGGESRDGALFGGXXXXAGDNSASVLFVRESKLIEALQSALPD 300
            S+    +IDPGVGIWTHGLACL+ LG+L+QLE+EGRYMGEAGYR   GNWLA P++PL E+ +    R E  +  +GG+  DG L G      G   ASVLFVRESKL+E   + + D
Sbjct:    5 SSATGGSIDPGVGIWTHGLACLESLGVLRQLESEGRYMGEAGYRDTTGNWLAIPTRPLQEWGAAPMRRGEHCSDESGGKGEDGRLGG----EGGGGGASVLFVRESKLMEMWFATVED 118
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.34.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KFE1_9PHAE3.940e-5647.46FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
D7G5G3_ECTSI2.250e-2554.24Monooxygenase FAD-binding n=1 Tax=Ectocarpus silic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 115..419
e-value: 9.5E-12
score: 47.5
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 117..396
NoneNo IPR availablePIRSRPIRSR038051-1PIRSR038051-1coord: 114..148
e-value: 7.0E-4
score: 15.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..364
NoneNo IPR availablePANTHERPTHR13789MONOOXYGENASEcoord: 97..397

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig73contigP-littoralis_Contig73:169461..174930 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig73.34.3mRNA_P-littoralis_Contig73.34.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig73 169460..174930 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig73.34.3 ID=prot_P-littoralis_Contig73.34.3|Name=mRNA_P-littoralis_Contig73.34.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=441bp
DGEPSWRRHRCVVWHPYLQAGAGQLTSCEAREVIMVTTTLVGGGLQRAMV
VCNSARRVVMLVPRARSTKGTNNGSNSGMTISSRLLLCPLSTATRPAAEA
SGDETKEGSEAVHRPVRDIVVVGAGVAGLASAACLARIGLRVTIAEIRGQ
DRWGHDREERGARVGVGGTAAGKRAKHKEPAALEKNGVSNTRDDAIDPGV
GIWTHGLACLDELGILQQLEAEGRYMGEAGYRSACGNWLATPSQPLGEYA
SRDEAGANGGESRDGALFGGGGGGAGDNSASVLFVRESKLIEALQSALPD
NTRFVQARVEDIARASGSGKGGGVCSGRGTAAGRFCAAAAATTSIGPAGS
RTGSSSSSSSGIDKGGDSGGGRWTQEFDLLVGADGPESFVRDMVMVMSSP
GPATPAAAGAGAEEGAGINRGGVSSAAARSEESGGGGAAVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf