prot_P-littoralis_Contig73.8.8 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig73.8.8
Unique Nameprot_P-littoralis_Contig73.8.8
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1674
Homology
BLAST of mRNA_P-littoralis_Contig73.8.8 vs. uniprot
Match: A0A6H5JV62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV62_9PHAE)

HSP 1 Score: 665 bits (1716), Expect = 2.590e-210
Identity = 418/625 (66.88%), Postives = 444/625 (71.04%), Query Frame = 0
Query:  668 LEGTDTNEADAAAARATEAKARLVEANARSEMAAFEAKXXXXXXXXXXEAATAVVMPLPATREAVTEDGRVGRRENAFLDTYFAFFGRFVRLETESEARRTLIELALEEATPPPTKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNMGVLRRGVTPEKGASLWAGVGIGAMLQ-------------GASPKDGEVYANMAREQLNGAQDFDADEAGGGGGPWSSCGNRIQQKVRADLMLSVLYDMLGRYDESDTFLDSAYEGVADSSTHLHDVLDLLTASKQERDWCGTPDSGPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGTGPGGTNGEVSSVGIGTPRQQTPMLITEGNALSLLNRLSWDTLRRFTTLPFAAASRGGHGGSSFQALAEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNVFLRPGMFDLPPFESFHKLTQLCHSCSPTVTLLVKAYKPHLEPLLSPPPLA 1279
            L GTDT EADAAAARA EAKARL EANARSE+AA EAKXXXXXXXXXX  ATAVV+PLPATRE +T DGRVGRRENAFLDTYFAFFGRFVR        RTL ELAL++AT   T A                                                                                                G+    L+RGVTPEKGASLWAGVGIGAMLQ             GASP+DGEVYA MAR+QL+ A+              +SC NR QQ+VRADLML VLYDMLGRYD+SD  LD+ +EGVA+SSTHLHDVLDLL ASKQERDW G+P +G QHXXXXXXXXXXXXXXXXXXXXXXXXXXX         G+   VSSVGIGTPRQQTPMLITEGNALSLLNRLSWD LRRFT LPFAAASRGGHGGSS+QAL EWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFN FLRPGMF+LP FESFH +T+LCHSCSPTV+LLVKAY PHLEPLLS PP+A
Sbjct:  506 LVGTDTQEADAAAARAVEAKARLAEANARSEIAAHEAKXXXXXXXXXXXXATAVVLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRWVFLF--LRTLTELALQDATT--TSADDDPGDQARSPPSPGRTSSPAVPGGWRAGGWGASRLPADGPGEGGRANGGEGGGVRSRDRQGSRAP------------------------------GRVASGLKRGVTPEKGASLWAGVGIGAMLQVEVTPLTLRIYVGGASPQDGEVYAKMARDQLDSAK--------------ASCANRRQQRVRADLMLCVLYDMLGRYDKSDECLDAGFEGVAESSTHLHDVLDLLLASKQERDWRGSPGAGHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXGK-------GSGAVVSSVGIGTPRQQTPMLITEGNALSLLNRLSWDMLRRFTKLPFAAASRGGHGGSSYQALVEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPGMFELPGFESFHTITRLCHSCSPTVSLLVKAYMPHLEPLLSTPPVA 1075          
BLAST of mRNA_P-littoralis_Contig73.8.8 vs. uniprot
Match: D7FM09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM09_ECTSI)

HSP 1 Score: 635 bits (1638), Expect = 2.850e-200
Identity = 480/907 (52.92%), Postives = 512/907 (56.45%), Query Frame = 0
Query:  670 GTDTNEADAAAARATEAKARLVEANARSEMAAFEAKXXXXXXXXXXEAATAVVMPLPATREAVTEDGRVGRRENAFLDTYFAFFGRFVRL-ETESEARRTLIELALEEATPPPTKAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKNMGVLRRGVTPEKGASLWAGVGIGAMLQGASPKDGEVYANMAREQLNGAQDFDADEAGGGGGPWSSCGNRIQQKVRADLMLSVLYDMLGRYDESDTFLDSAYEGVADSSTHLHDVLDLLTASKQERDWCGTPDSGPQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTG------GTGPGGTNGEVSSVGIGTPRQQTPMLITEGNALSLLNRLSWDTLRRFTTLPFAAASRGGHGGSSFQALAEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNVFLRPGMFDLPPFESFHKLTQLCHSCSPTVTLLVKAYKPHLEPLLSPPPLATTTXXXXXXXXXXXXXXXXXNAAPSKPCSSSFPWSPSSVAAPAAREHMNIPGHGGKQQQLEGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTPLSNPSFSSPSXXXXXXXXXXPTWSAKRHHELAAGGRVDCPSAEXXXXXXXAGEQGFRAPAAPTNPGEFQVPVAAVDGCPSPGGGGERAAVGADGGGVGHLPAG--PHAASNHIGVFGPGTRVMDRNLSFQDYHALMEMFAVDQKLNASLATPLDPIDDPLADWNSSVEDQVGPELGVPS-RSSASEE 1566
            GTDT EADAAAARA EAKARLVEANARSEMAA EAKXXXXXXXXXX AATAVV+PLPATRE +T DGRVGRRENAFLDTYFAFFGRFVR  + + +AR           +PP                                             XXXXXXXXXXX                                           GG   G L+RGVTPEKGASLWAGVGIGAMLQGASP+DGEVYA MAR+QL+ A+ +  ++          C NR QQ+VRADLML VLYDMLGRYD SD  LD+ +EGVA+SSTHLHDVLDLL ASKQERDWCG+P +G QHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        G G G     VSSVGIGTPRQQTPMLITEGNALSLLNRLSWDTLRRFT LPFAAASRGGHGGSS QALAEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFN FLRPGM                                                                                             +  + G    + GG                                                                  R      GG               AGE            GE              GGGG       DGG +GH PAG    A SNH+G+FGPGTR+MDRNLSFQDY +LMEM AVDQ+LNASLATPLDPIDD LADWNSSVED V    G+ S R+S SE+
Sbjct:  480 GTDTQEADAAAARAAEAKARLVEANARSEMAAHEAKXXXXXXXXXXXAATAVVLPLPATREEITRDGRVGRRENAFLDTYFAFFGRFVRAGDPDGQAR-----------SPP---------------------------------------------XXXXXXXXXXXGGAGAGGGGASRLPADGPGEGGRANGGEVGGVRSRDRQGSRAPGGVASG-LKRGVTPEKGASLWAGVGIGAMLQGASPEDGEVYAKMARDQLDTAKAY-GEDGXXXXXXXXXCANRRQQRVRADLMLCVLYDMLGRYDMSDECLDAGFEGVAESSTHLHDVLDLLLASKQERDWCGSPGAGHQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGSGAV---VSSVGIGTPRQQTPMLITEGNALSLLNRLSWDTLRRFTKLPFAAASRGGHGGSSCQALAEWRSGEGWYGTLVKAHSHLCADLNDDVRALPRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLWRHPLHLAACHLAIAGRPGAYEKLRRTFNAFLRPGM-----------------------------------------------------------------------------------------NSGELKSNAGADGYVAGGD-----------------------------------------------------------------RGAAEKGGG--------------FAGE------------GELV------------GGGGS------DGGALGHSPAGVPEGAGSNHVGMFGPGTRLMDRNLSFQDYQSLMEMLAVDQQLNASLATPLDPIDDLLADWNSSVEDGVESRAGMLSGRNSGSEQ 1127          
BLAST of mRNA_P-littoralis_Contig73.8.8 vs. uniprot
Match: A0A6H5JWV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWV9_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.940e-12
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0
Query: 1583 LEDMEDPLLGYPNPVANFGPQFTPHDDPAPADSTADRNLSSFDSASSVA 1631
             E+ EDPL GYPNP ANFGPQFTPHDDPAPADS+AD+++ +  SA+SVA
Sbjct:   28 FEEPEDPLFGYPNPSANFGPQFTPHDDPAPADSSADKDVPAVPSAASVA 76          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.8.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JV62_9PHAE2.590e-21066.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM09_ECTSI2.850e-20052.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWV9_9PHAE1.940e-1271.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 676..696
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1389..1449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1011..1076
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1056..1076
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 770..890
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 625..676
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1389..1406
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1019..1039
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1277..1316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..868
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..523
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1540..1577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1273..1369
NoneNo IPR availablePANTHERPTHR47424:SF3REGULATORY PROTEIN GAL4coord: 71..123
NoneNo IPR availablePANTHERPTHR47424REGULATORY PROTEIN GAL4coord: 71..123
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 190..235
e-value: 0.73
score: 5.5
coord: 72..115
e-value: 1.0E-8
score: 45.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 77..111
e-value: 1.4E-7
score: 31.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 77..104
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 77..106
score: 10.15
IPR001138Zn(2)-C6 fungal-type DNA-binding domainCDDcd00067GAL4coord: 77..107
e-value: 6.13939E-11
score: 56.5177
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 73..129
e-value: 4.4E-8
score: 34.9
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 74..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig73contigP-littoralis_Contig73:31219..58139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig73.8.8mRNA_P-littoralis_Contig73.8.8Pylaiella littoralis U1_48mRNAP-littoralis_Contig73 28173..58386 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig73.8.8 ID=prot_P-littoralis_Contig73.8.8|Name=mRNA_P-littoralis_Contig73.8.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1674bp
MMTMNTGDNNQDDHKRSGGFRRHSHHHQQQQHLEFSTAGARQQQGRAGGG
KGGGARGEGGGRGGGEMPTGPGERRASCDFCSRRKRKCDGINPCQNCRKL
KLVCHFSVKQKSGRKRKPREGEGDQKMEAPTPPAQPSNIRAGLGGKGSTA
MAMAAATAVAAWDGGSRGRGGSSSSGSRSGDGGGGGGKGDPPPLACSLCT
RGSRICDGEYPCGCCLAAGHSDLCIFPSKRKSPSGSKGMPRQKQRRENAE
QGSLPVVSAADPGRRGRGPAGGVGVGGGSSGLTCSSGDGRTHSSRSSSSS
SGSRSSSRRHHRDAIDRNDGLARPSPPPPSGDGSVAYGGHGGVHSSSKPP
RDARTGRHSYSGHIHHRSTSQSGGGGGGGGVGGGCTGAHHDSSLGGGDGV
GVGGCGESGDASEARHARTVPSGVTGSAAAAAMAAQAPFNTRRVHHTHHL
EGSPPPPPMASQLQQLNQHQGHNDQTQPNHPQQSRGGGGSAGDDRSAGGQ
DDAQELPQQQRQHQYQQQQSFGHLAWKPAPIVSAARPGVSGVSAAAAAAE
SDQHHQYHQNHDPPGAGGGVGEGGGGGGGSGTAKSLVDFYGSAAVAGSRS
GSGSAAEATASAAAPAAVLASGPGSVASPSLPPSPSPRTPSMTAATAAEG
AGAAAAAAAAAPPSPRALEGTDTNEADAAAARATEAKARLVEANARSEMA
AFEAKEAAEAAEIAKEAATAVVMPLPATREAVTEDGRVGRRENAFLDTYF
AFFGRFVRLETESEARRTLIELALEEATPPPTKAGGGGEGRGRRDPNAGG
GSSSGSGSGSGSGSDSRSRSSSPSPPPNATHKSPDSSASSAPGSGNSGSG
SGSGSVSRNGSSSGGGGGGSTGAGAGRGAGGKNMGVLRRGVTPEKGASLW
AGVGIGAMLQGASPKDGEVYANMAREQLNGAQDFDADEAGGGGGPWSSCG
NRIQQKVRADLMLSVLYDMLGRYDESDTFLDSAYEGVADSSTHLHDVLDL
LTASKQERDWCGTPDSGPQHHHHHHHHHHHHHHHHHHPQQSSSGGGGGGT
GGTGPGGTNGEVSSVGIGTPRQQTPMLITEGNALSLLNRLSWDTLRRFTT
LPFAAASRGGHGGSSFQALAEWRSGEGWYGTLVKAHSHLCADLNDDVRAL
PRCPLAVGLLKSKLSWLHSCLGRTTAAADKSQVMLALLEPFPGAGRWSLW
RHPLHLAACHLAIAGRPGAYEKLRRTFNVFLRPGMFDLPPFESFHKLTQL
CHSCSPTVTLLVKAYKPHLEPLLSPPPLATTTATTATTNSNSNSNNRGNN
AAPSKPCSSSFPWSPSSVAAPAAREHMNIPGHGGKQQQLEGGSGGGGGVG
RGGVGVGTTPPHAAAANSANANANASAAAVTPLSNPSFSSPSSSSATTTT
TLPTWSAKRHHELAAGGRVDCPSAEEGGGGGGAGEQGFRAPAAPTNPGEF
QVPVAAVDGCPSPGGGGERAAVGADGGGVGHLPAGPHAASNHIGVFGPGT
RVMDRNLSFQDYHALMEMFAVDQKLNASLATPLDPIDDPLADWNSSVEDQ
VGPELGVPSRSSASEEGGDNCQEDEMGDEGDMLEDMEDPLLGYPNPVANF
GPQFTPHDDPAPADSTADRNLSSFDSASSVAAAAAAAAVTMTGFKNGGNG
RLGAHASCVIAVTMQLLCRDAKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf