mRNA_P-littoralis_Contig73.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A345MSI2_9VIRU (Replication-associated protein n=1 Tax=CRESS virus sp. TaxID=2202563 RepID=A0A345MSI2_9VIRU) HSP 1 Score: 407 bits (1046), Expect = 3.200e-138 Identity = 195/368 (52.99%), Postives = 257/368 (69.84%), Query Frame = 1
Query: 4 SQVKNLSFRYSLPSDWKLNDGQETVRMGNALQNYLIETLNTSKYCFQLECTRDENDVKGANYHFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTCVTRYSTKIESRVDVKYTWSDEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELRKGVLRRIRGFPCLKGDGHQALELIPDALKNNSYVDDPVLNQMVVEQDLNEFLEKRTKRVDISDKEYTFEGIGNVYSIEDWKNAITVVNRFAR 1107
SQV N+SFRYSLP DWKL DG ET +GN L+ YL E ++ Y FQLE TR E+D KGANYHFQG L +K RV+ L +K+N T WRGME+SP HS + Y+ K ES+V +Y W++ ++ Y G DLP LL WQ++LE Y+KG + DRRI+WI+DP G GGKS+FCKYMD+ Y T TIGYS S DA+Y VSK+ A+AY FDLTRTKPK+FS GDLY+++E +KNGHFMNSKYES VVLM+ PHV+VFSN +PE+++LS+DRW IYEL GV +++ G L G L+ +PDA DDP ++ + D++ FL+ R RVD+ ++ YTF ++++W++AI V R R
Sbjct: 9 SQVVNISFRYSLPKDWKLEDGNETTNVGNRLEKYLKENISVKSYQFQLESTRKEDDPKGANYHFQGLMKLKEKDRVTALIKKINITEWRGMELSPAHSTATLEMYTNKSESKVGDEYIWNNILKEATYKGEDLPKELLLWQAMLEQYIKGPVCDRRIVWIWDPEGCGGKSKFCKYMDFKYGTKTIGYSDSKDAMYMVSKSPGAKAYFFDLTRTKPKMFSQGDLYASIEQIKNGHFMNSKYESSVVLMEPPHVVVFSNHMPEIDNLSKDRWSIYELFNGVPKKLSGKTVLFSKGFHHLQRVPDAKDIVEDEDDPDTVALLKKVDIDIFLKNRKSRVDVDEQRYTFVSCKRKSTVDEWESAIDTVQRNVR 376
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A075LYT4_9VIRU (Replication-associated protein n=1 Tax=McMurdo Ice Shelf pond-associated circular DNA virus-8 TaxID=1521392 RepID=A0A075LYT4_9VIRU) HSP 1 Score: 144 bits (362), Expect = 1.700e-36 Identity = 80/216 (37.04%), Postives = 126/216 (58.33%), Query Frame = 1
Query: 190 HFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSK--TCVTRYSTKIESRVDVKYTWSDEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELR 831
H+Q + L K+ R TL LN R G+E+S + + RY K ++R+ WS + ++Y G DLP +L WQ L Y+K R I+W+ DP+G GK+ F K M + + + + + D + V+K+ Y+F+L+RTKPK+ S+ DLY+ LE +K+G F+N+KYE+ VLM PHV+V +N +PE+ LS+DRW + ++
Sbjct: 46 HYQIYWKLTKRDRPKTLAIALN-ERLPGIELSAASTGGVLALKRYCMKDDTRL--AGPWSKK---KIYRGEDLPVKMLPWQQKLADYLKTEAGKREIIWLMDPLGKMGKTIFGKMMAYWRGALYLTWGDTKDVMNLVAKSDKNNVYIFNLSRTKPKMMSSDDLYTALEQIKDGAFINTKYETSQVLMKPPHVVVMANCMPEMAKLSKDRWNVIVMK 255
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A8A4XC23_9VIRU (Replication-associated protein n=1 Tax=Grus japonensis CRESS-DNA-virus sp. TaxID=2815045 RepID=A0A8A4XC23_9VIRU) HSP 1 Score: 138 bits (348), Expect = 9.750e-35 Identity = 76/218 (34.86%), Postives = 118/218 (54.13%), Query Frame = 1
Query: 190 HFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTCVTRYSTKIESRV----DVKYTWSDEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELR 831
H+QGCF+L +K+R++ L L W+G+ + P S Y K E+R D K W + D+ WQ+ +++ + G DDR + WIYDP+G GGK+ F KY + + ++S D Y + T +F+ +RT + YS +E +K+G ++KYESK++L + PHVI+F+N LPE E+LS DRW +YEL+
Sbjct: 71 HYQGCFSLKEKERLAPLKNALG---WQGIHLEPARSWWASRGYCRKNETRKGGPWDHKTKWIKTIT---------KDMFYPWQTAIDNLISGDTDDRSVYWIYDPIGCGGKTAFAKYAAVHKRAAVLSNAASKDIAYALG-TDEFTTVIFNFSRTVDGRVN----YSAIEGIKDGLLFSAKYESKMMLFNPPHVIIFANFLPEAEALSLDRWIVYELK 271
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A835YYC1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC1_9STRA) HSP 1 Score: 116 bits (291), Expect = 9.920e-27 Identity = 61/157 (38.85%), Postives = 91/157 (57.96%), Query Frame = 1
Query: 358 WSDEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYEL 828
W+D+ +Y G DLP VLL +Q L+ Y+ G + R ILW+ D G GKS F KYM + + +T + L V K K +R Y+ DL+ TK K S+ +LYST+E +K+G+ +++KY + PHVIVF+N P L++DRW + +
Sbjct: 92 WADQ---DVYLGQDLPRVLLPYQEQLKEYMLGPVSPREILWLVDEHGNSGKSIFAKYMAYHHGCMTFSTGDTGGLLNMVYKHKTSRCYILDLSHTKSKTLSSEELYSTIEDIKDGYIVDTKYGTGSKQFAPPHVIVFANSPPNNGCLTKDRWTVQHI 245
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A345N0A9_9VIRU (Rep n=1 Tax=CRESS virus sp. TaxID=2202563 RepID=A0A345N0A9_9VIRU) HSP 1 Score: 102 bits (253), Expect = 6.640e-21 Identity = 78/261 (29.89%), Postives = 121/261 (46.36%), Query Frame = 1
Query: 94 LQNYLIETLNTSKYCFQLECTRDENDVKGANYHFQGCFTLNKKQRVSTLCRKLNFTRW--RGMEISPVHSK----TCVTRYSTKIESRVDVKYTWSDEVEVQ-----LYNGTDLP--DVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKV--VLMDIPHVIVFSNQLPELESLSQDRWCIYELR 831
L Y E + FQ E + + H+QG L +++ TL + R + ++P+ + + Y TKIESR+ + W D V+ Y G DL + L WQ + ++ DDR + WIY+ G GKS+ KY+ W + ++ V +AY+ ++ R S DL+S LE++K+G F+ S KV + M+ PHVIVFSN LP+L S DRW +YE++
Sbjct: 32 LSQYFEERSYVEHWVFQEE--------RVSRTHYQGKIELKERKAKGTLLADFESAGFANRHLTLAPLSNNGRKADALDFYCTKIESRI--RGPWMDAAYVKPVKRHRYEGKDLECMEKPLLWQGQILEFLDTAPDDRTVRWIYNESGNAGKSKLQKYLCWKGMATMVPMGTATQLKTAVIAKGTHKAYVCNIGRVSGNQESQKDLFSALEAIKDG-FVESAMYGKVQQLFMEPPHVIVFSNDLPDLRLASIDRWKVYEVK 281
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A7G5M2W2_9VIRU (Replication-associated protein n=1 Tax=Crucivirus-81 TaxID=2761338 RepID=A0A7G5M2W2_9VIRU) HSP 1 Score: 98.2 bits (243), Expect = 1.090e-19 Identity = 84/281 (29.89%), Postives = 123/281 (43.77%), Query Frame = 1
Query: 52 KLNDGQETVRMGNALQNYLIETL---------NTSKYCFQLECTRDENDVKGANYHFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTCVTRYSTKIESRVDVKYTWSDEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTI--TIGYSSSVDALYTVSKTKNAR------AYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELRKGVL 843
K N+ + V NY E + N+ KY FQ E D N K H QG L K+ R S F + + P + Y K E++ + + E++L L WQS + + + G I+DR + WIYD +G GK+ FCKY+ I T G + V + KN R ++F R+ + G Y +ESVK+G ++K+ S ++ + PHV VFSN+LP L LSQDRW + + G L
Sbjct: 23 KDNERNQRVHWFFTWNNYTEENIEMLIKFFKANSKKYIFQEEIG-DLNKTK----HLQGNVQLKKRMRWS------EFGLPKQICWEPTRNIDKANAYCCKEETKNGRTFKFGFPSELKLIT------TLRPWQSKICTIINGEINDRFVYWIYDEMGENGKTVFCKYLYANQDAIIATDGANKDVSCML-AELVKNGRDLNDKTTFIFHFPRS-----TEGLSYKAIESVKDGLITSTKFHSNTLVFNCPHVFVFSNELPNLAKLSQDRWKLKTIINGDL 280
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A5Q2F5G7_9VIRU (Replication associated protein n=1 Tax=Antarctic virus COCH21_111 TaxID=2664241 RepID=A0A5Q2F5G7_9VIRU) HSP 1 Score: 98.2 bits (243), Expect = 1.200e-19 Identity = 82/268 (30.60%), Postives = 126/268 (47.01%), Query Frame = 1
Query: 106 LIETLNT--SKYCFQLECTRDENDVKGANYHFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTCVTR-------YSTKIESRVDVKYTWS-------------DEVEVQLYNGTDLPDVLLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELRKGVL 843
++ETL+ S+Y FQLE + H+QG +L+ K R + +W P S+ TR Y K SR++ +T ++ ++L D PD WQ + + D R I W ++P G GK+ F KY+ K + + D LY ++ K + + D+ +++ + YS +ES+KNG F + KYESK VL + PHV+VFSN+LPELE LS+DRW + + VL
Sbjct: 63 ILETLDPRCSRYAFQLEMCPTTKKL-----HYQGQMSLSVKARFHEV------VKW-----FPDKSRVRATRNVVGSELYCQKGASRIEGPWTKGPVATPKGGRPKKEEDEPLEL----DEPDRA--WQQEILAIFDTKPDKRTIYWYWEPDGNAGKTCFAKYVCATRKALYVNGKEG-DILYAAAE-KKVKIVIVDVKKSQSDV-----PYSAIESLKNGIFFSGKYESKDVLRNSPHVVVFSNRLPELEFLSKDRWVVRRIEPAVL 301
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A3G2YTD5_9VIRU (Replication-associated protein n=1 Tax=CRESS virus sp. TaxID=2202563 RepID=A0A3G2YTD5_9VIRU) HSP 1 Score: 95.9 bits (237), Expect = 6.340e-19 Identity = 81/290 (27.93%), Postives = 134/290 (46.21%), Query Frame = 1
Query: 73 TVRMGNALQNYLIETLNT--SKYCFQLECTRDENDVKGANYHFQGC-FTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTC--VTRYSTKIESRVDVKYTWSDEVEVQLYNGTDLPDV--LLHWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCY----KTITIGYSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYELRKGVLRRIRGFPCLKGDGHQALELIPD 909
T G +LI T K+ FQ E + + Q C +L+KK S + + L G ++P S C Y K E+R++ +T D + + D LL WQ+ L G +DR+I + D G GK CK WCY + ++S D + V+ + Y+ D+ R PK + N DLY+ +E++K+G+ + +Y + L+D P++IVF+N P+ L+ +RW ++ +R L + +P + DGH LE++ D
Sbjct: 12 TADAGRNPAPFLIGTFKEFCKKWAFQTE------EAPTTGWLHQQCRISLHKKTTESCVVKLLTAKDVEGFHVTPTSSNACKGAPFYVMKDETRIEGPWTDKDIEPIPSTRTSRKLDEEGLLPWQNQLMLEATG-YNDRQIHCVIDKEGDHGKGALCK---WCYVHGYACLVPPFNSPGDLIQFVNSRPVSELYMIDMPRAMPKKYLN-DLYTGIETLKDGYIYDKRYRGQFKLIDEPNIIVFTNTPPKRGYLTANRWKMWTIRDNELE-VYTYPVVLTDGH--LEVVYD 287
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A5Q2WAE2_9VIRU (Rep protein n=1 Tax=CRESS virus sp. ctrF513 TaxID=2656690 RepID=A0A5Q2WAE2_9VIRU) HSP 1 Score: 94.0 bits (232), Expect = 2.720e-18 Identity = 75/260 (28.85%), Postives = 121/260 (46.54%), Query Frame = 1
Query: 76 VRMGNALQNYLIETLNTSKYCFQLECTRDENDVKGANYHFQGCFTLNKKQRVSTLCRKLNFTRWRGMEISPVHSKTCVTRYSTKIESRVDVKYTWSDEVEVQLYNGTDLPDVLL-----HWQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIGYSSSVDALYTVSKTKNARA----YLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRWCIYEL 828
+ + N +N L E K Q E + EN + H Q + N ++ +++ K F R I PV Y TKI++R V + + Y ++ + L WQ + + + DDR I W +DP+G GKS F K++ +G DALY + K + +FD+ R + N Y+ +ES+KNG +SKY+SK ++ + PH+I+F+N P L +LS DRWC+ ++
Sbjct: 20 LTINNPKENELEELAKIYKITGQYE--KGENGTR----HIQCVVSFNCQRYFNSI--KEMFPR---AHIEPVRRINDAVNYVTKIDTRDCVSPVIHPDHK--RYIKREIKNKFLMCKPYKWQEEIMTILDKEPDDRTIYWYWDPIGCTGKSVFTKHLVMTRGAFAVG-GRVQDALYMIMKKQKKGLEPDIIIFDIPRNQ----GNDVSYNAIESIKNGCCFSSKYKSKDLIFNTPHIIIFANSEPNLMNLSSDRWCVRKI 261
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Match: A0A345MXR7_9VIRU (Putative viral replication protein n=2 Tax=root TaxID=1 RepID=A0A345MXR7_9VIRU) HSP 1 Score: 92.4 bits (228), Expect = 9.350e-18 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 1
Query: 421 WQSVLESYVKGTIDDRRILWIYDPVGAGGKSRFCKYMDWCYKTITIG---YSSSVDALYTVSKTKNARAYLFDLTRTKPKLFSNGDLYSTLESVKNGHFMNSKYESKVVLMDIPHVIVFSNQLPELESLSQDRW 813
WQ +++ + DDR I W+Y G GKS FCKY+ + Y + G YS ++ ++ + N +FDL R S YS LE++KNG N+KYE+ L + PH+++F+N PE E++S+DR+
Sbjct: 143 WQVQMDNCLSYEPDDRTIYWVYSKNGGMGKSTFCKYLAYTYNAVICGKGNYSDIINIMFNANM-DNTNLVVFDLPRNNGNKVS----YSALEAIKNGMICNTKYETGNKLFNPPHILIFANDEPEWEAMSEDRF 271 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig73.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig73.3.1 >prot_P-littoralis_Contig73.3.1 ID=prot_P-littoralis_Contig73.3.1|Name=mRNA_P-littoralis_Contig73.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=369bp MSQVKNLSFRYSLPSDWKLNDGQETVRMGNALQNYLIETLNTSKYCFQLEback to top mRNA from alignment at P-littoralis_Contig73:3318..4424+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig73.3.1 ID=mRNA_P-littoralis_Contig73.3.1|Name=mRNA_P-littoralis_Contig73.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1107bp|location=Sequence derived from alignment at P-littoralis_Contig73:3318..4424+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig73:3318..4424+ >mRNA_P-littoralis_Contig73.3.1 ID=mRNA_P-littoralis_Contig73.3.1|Name=mRNA_P-littoralis_Contig73.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1107bp|location=Sequence derived from alignment at P-littoralis_Contig73:3318..4424+ (Pylaiella littoralis U1_48)back to top |