mRNA_P-littoralis_Contig728.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: D7FH69_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH69_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 1.690e-140 Identity = 193/259 (74.52%), Postives = 216/259 (83.40%), Query Frame = 3
Query: 3 YTSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLHPGP 779
YTSPLPHTYV A+ +P++FSWT++ G S VT+NLNQHIPQYCGSCWAH ALSSLADRIKI+R GHG DI LSIQ +LNCA VAG+CHGGT TGTYE+ASNNP+PF+TCQNY+A D EAV S+PNATV+EYG V GEE+IMAEVFARGPVACDIAA LH+YTGG++DIPE+P ETDHVVAIAGWGETEEG KFWIVRNSWGEYWGEGGWFRIKRG+NQLL+ESNC WAVPGSWT LHP P
Sbjct: 50 YTSPLPHTYVPADGLPSSFSWTDVGGRSFVTKNLNQHIPQYCGSCWAHGALSSLADRIKIMRGGHGMDINLSIQVILNCATEVAGSCHGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFNEECEAVQSYPNATVSEYGTVVGEENIMAEVFARGPVACDIAASRLHEYTGGIVDIPELPAETDHVVAIAGWGETEEGLKFWIVRNSWGEYWGEGGWFRIKRGDNQLLLESNCGWAVPGSWTELHPRP 308
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A6H5J6W1_9PHAE (Cathepsin X n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W1_9PHAE) HSP 1 Score: 416 bits (1069), Expect = 9.600e-137 Identity = 189/257 (73.54%), Postives = 212/257 (82.49%), Query Frame = 3
Query: 3 YTSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLHP 773
Y SPLPHTYV A+D+PA+FSWT++ G S VT+NLNQHIP+YCGSCWAH ALSSLADRIKI+R GHG DI LSIQ +LNCA VAG+C+GGT TGTYE+ASNNP+PF+TCQNY+A D AV S+PNATVAEYG V GEE+IMAEVFARGPVACDI A LH+YTGG+++IPE+P TDHVVAIAGWGETEEG KFWIVRNSWGEYWGEGGWFRIKRGENQLL+ESNC WAVPGSWT LHP
Sbjct: 40 YASPLPHTYVMADDLPASFSWTDVGGRSFVTKNLNQHIPKYCGSCWAHGALSSLADRIKIMRGGHGIDINLSIQVILNCATEVAGSCYGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFDEECAAVQSYPNATVAEYGTVVGEENIMAEVFARGPVACDINASTLHEYTGGIVNIPELPAGTDHVVAIAGWGETEEGVKFWIVRNSWGEYWGEGGWFRIKRGENQLLLESNCGWAVPGSWTELHP 296
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: D8LCL2_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL2_ECTSI) HSP 1 Score: 400 bits (1028), Expect = 1.370e-125 Identity = 183/259 (70.66%), Postives = 206/259 (79.54%), Query Frame = 3
Query: 6 TSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLHPGPH 782
TSPLPHTY+ D+P FSWTN+ G S VT+NLNQHIPQYCGSCWAH ALSSLADRIKI+R G G DI LS+Q +LNCA +AG+CHGG+ TGTYE+ASNNP+PF+TCQ Y+A D AV SFPNATVAEYG V+GE DIMAEVFARGPVAC+I A L +YTGGVIDIP++ ETDH+VAIAGWGET EG+KFWIVRNSWGEYWGEGGWFR+KRGENQLL+ESNCAWAVPGSWT L P H
Sbjct: 21 TSPLPHTYLDPSDLPRFFSWTNVGGRSYVTKNLNQHIPQYCGSCWAHGALSSLADRIKIMRDGRGADINLSVQVILNCATELAGSCHGGSHTGTYEYASNNPVPFDTCQQYQASDNTCDAIGKCKTCWNFDEECAAVESFPNATVAEYGTVSGEADIMAEVFARGPVACEIDASPLREYTGGVIDIPDVSAETDHIVAIAGWGETREGDKFWIVRNSWGEYWGEGGWFRLKRGENQLLLESNCAWAVPGSWTELQPPHH 279
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A835YGR9_9STRA (Cathepsin X n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGR9_9STRA) HSP 1 Score: 347 bits (889), Expect = 6.200e-110 Identity = 159/265 (60.00%), Postives = 193/265 (72.83%), Query Frame = 3
Query: 6 TSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLH------PGPH 782
TSP+PHTY+++ D+PANF W +I G SLVT+NLNQHIPQYCGSCWAH ALSSL DRIKILR G G DI LS+Q +LNCA AG+CHGG + G +E+ + N IPF+TCQ Y+A D V +PNATVAE+G GE IM EVFARGP+ACDI AD LH+YTGGV+D P+ T+HVV+I GWG T+ G+K+W+VRNSWGEYWGE GWFR+ RGENQLL+ESNCAW VPG+WT+++ P PH
Sbjct: 39 TSPMPHTYLRSVDLPANFRWDDIAGRSLVTKNLNQHIPQYCGSCWAHGALSSLGDRIKILRGGAGLDINLSVQVILNCATATAGSCHGGFAKGVFEWGTENAIPFDTCQQYKARDEKCEPLNVCRTCWTFDDTCIPVAPYPNATVAEFGDAVGERAIMKEVFARGPIACDIDADPLHEYTGGVLDWPQKSPGTNHVVSIVGWGVTDGGKKYWVVRNSWGEYWGEQGWFRLVRGENQLLIESNCAWGVPGAWTDVNSQTPVVPPPH 303
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A7S2V244_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V244_9STRA) HSP 1 Score: 328 bits (842), Expect = 6.950e-104 Identity = 145/253 (57.31%), Postives = 185/253 (73.12%), Query Frame = 3
Query: 9 SPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNL 767
SPLPH Y+ AE +P +F+W +++G S VTRNLNQHIPQYCGSCWAHA LS+LADR+KI R+ G DI LS+Q +LNCA +VAG+CHGG +G YE+A NN +PF+TCQ Y+A+D AV+ +PN TV+EYG+V GE ++M E++ RGP+ACDI + LH YTGG++D PE+ E +H V + GWG EEG+K W +RNSWGEYWGE GWFR+ RGENQL +ES C WAVPGSWT +
Sbjct: 42 SPLPHEYLNAEALPESFTWKDVNGMSFVTRNLNQHIPQYCGSCWAHATLSALADRVKIARKAKGVDINLSVQVILNCAQNVAGSCHGGEPSGVYEWAHNNSVPFDTCQQYKAIDEECIPSNICRSCTSFSSDCYAVSQYPNVTVSEYGLVQGEANMMTEIYERGPIACDINSGQLHTYTGGIVDYPEV-LEPNHSVEVVGWG-FEEGKKIWYIRNSWGEYWGEQGWFRMVRGENQLGIESGCTWAVPGSWTEV 292
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: C1FFA0_MICCC (Cysteine endopeptidase n=3 Tax=Micromonas TaxID=38832 RepID=C1FFA0_MICCC) HSP 1 Score: 282 bits (721), Expect = 1.240e-84 Identity = 137/278 (49.28%), Postives = 180/278 (64.75%), Query Frame = 3
Query: 9 SPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGH--GTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNP-IPFETCQNYEAVDXXXXXXXXXXXXXXXXXXX------------------EAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIP-EMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLHPG 776
S PH Y+ A +P +F+W+++ G + +T+ LNQH+PQYCGSCWAH A+SSLADRIKI + H G D+ L+IQ +LNC VAG+CHGG++TG Y+F +PFETC YEA A+ SFPNA++AEYG V+GE++IMAEV+ARGPVA I A+ L +YTGG++D P + E +H+VAI GWGET++GEK+WIVRNSWGEYWGE G+FRI RG+ L +E C+WA P SWT + G
Sbjct: 76 SARPHEYIDATKLPKSFTWSDVEGVNYLTKMLNQHVPQYCGSCWAHGAMSSLADRIKIAKGPHAKGPDVNLAIQFILNCGTEVAGSCHGGSATGAYQFVKEAGFVPFETCLVYEACSAESSEGSCAAGDVSRYECKPENTCRTCSTFSDMGGFCSALDSFPNASIAEYGEVSGEKEIMAEVYARGPVAAGIDANLLDEYTGGILDQPADYEYEINHIVAIVGWGETKKGEKYWIVRNSWGEYWGEMGFFRIVRGKKALGIEDECSWATPASWTTHNQG 353
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A7S2RSF5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSF5_9STRA) HSP 1 Score: 280 bits (716), Expect = 5.090e-84 Identity = 132/266 (49.62%), Postives = 174/266 (65.41%), Query Frame = 3
Query: 3 YTSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNP-IPFETCQNYEA------------VDXXXXXXXXXXXXXXXXXXXEAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWT 761
Y+ LP TY+ A+D+P FSW + G S +T+NLNQHIPQYCGSCWAH A+S+ ADRIKI R G G DI LSIQ +LNC VAG+C+GG+ +GTY+ + +P++TCQ Y A VD A+ FPNA++AEYG ++GEED++AE++ARGP+AC I A +HDYTGG+ + T+H+V+I GWG E G K+W VRNSWGEYWGE G FR++RGE+ L +E NCAWA ++T
Sbjct: 80 YSLRLPSTYLSADDLPEEFSWAEVDGVSYLTKNLNQHIPQYCGSCWAHGAMSAFADRIKIARGGQGIDINLSIQWILNCGSDVAGSCYGGSGSGTYQLVKDTGYVPYDTCQPYLACSSDSAEGFCGSVDTTCSAINTCRTCSTFGVDCAAIDVFPNASIAEYGTISGEEDMLAEIYARGPIACSIDATPIHDYTGGIAE-DTADTSTNHIVSIYGWG-VENGTKYWHVRNSWGEYWGEAGHFRVRRGEDDLGLEKNCAWATVDAFT 343
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A0L0G2H7_9EUKA (Cathepsin X n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G2H7_9EUKA) HSP 1 Score: 277 bits (709), Expect = 3.210e-83 Identity = 131/274 (47.81%), Postives = 174/274 (63.50%), Query Frame = 3
Query: 3 YTSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASN--NPIPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEA---------------VTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEK-FWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLH 770
Y S LP Y + ++P NF+W NI+G S++T+ LNQHIPQYCGSCWAH A+SS ADRIKI R G+DI L+IQ +LNC VAG+CHGG+ TG Y F N IP++TC YEA V +PNAT+AEYG V GE ++MAE++ RGP+AC I A + +Y GG++D K +H++++ GWG ++ + +WIVRNSWGEYWGE G+FR+KRGENQL +ES+CAWA PG+WT ++
Sbjct: 63 YHSHLPQEYTEKHELPTNFNWGNINGRSMLTKPLNQHIPQYCGSCWAHGAMSSFADRIKIARDAKGSDINLAIQFILNCGTDVAGSCHGGSHTGAYNFVKNYAKHIPYDTCLQYEACSAESTEGTCKDRDFTCTGANTCRTCSTFTAYGGFCSEVDRYPNATIAEYGNVVGEYNMMAEIYRRGPIACGIDASPVDNYKGGIVDNTSA-KSINHIISVVGWGVDKKTDTPYWIVRNSWGEYWGEMGYFRVKRGENQLAIESSCAWATPGTWTEMN 335
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A7S0QTS4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QTS4_9CHLO) HSP 1 Score: 277 bits (708), Expect = 5.950e-83 Identity = 133/273 (48.72%), Postives = 179/273 (65.57%), Query Frame = 3
Query: 3 YTSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNP-IPFETCQNYEAVDXXXXXXXXXXXXXXXXXXXEA---------------VTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEGEK-FWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLH 770
++SPLPHTYVK E +P NF+W NI G S++T+ LNQHIPQYCGSCWAH +LS+LADRIKI R G+G D L+IQ +LNC +AG+CHGG+ TG Y F + +P++TC YEA V FPNAT++EYG V+GE +MAE++ARGP+AC+I A L DYTGG+ E +H+V+I GWG +E+ +K +WIVRNSWGEYWGE G+FR++RG++ L +E +CAWA P ++T ++
Sbjct: 75 FSSPLPHTYVKEESMPKNFNWGNIKGQSMLTKMLNQHIPQYCGSCWAHGSLSALADRIKIARGGNGPDANLAIQYILNCGAGIAGSCHGGSHTGVYHFIKQSGFVPYDTCLVYEACSQESTEGTCGGGDYTCKPINTCRTCSTFSKFGGFCSEVDEFPNATISEYGRVSGEAKMMAEIYARGPIACEIDATPLDDYTGGIFS-EEGKYSANHIVSIVGWGYSEKEDKSYWIVRNSWGEYWGEMGFFRVERGKDLLGLERSCAWATPETFTQMN 346
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Match: A0A7S4GL91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GL91_9EUGL) HSP 1 Score: 272 bits (695), Expect = 1.300e-81 Identity = 127/272 (46.69%), Postives = 172/272 (63.24%), Query Frame = 3
Query: 6 TSPLPHTYVKAEDIPANFSWTNIHGYSLVTRNLNQHIPQYCGSCWAHAALSSLADRIKILRRGHGTDITLSIQAVLNCAGHVAGTCHGGTSTGTYEFASNNP-IPFETCQNYEAVDXXXXXXXXXXXXXXXXXXX---------------EAVTSFPNATVAEYGVVTGEEDIMAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWG-ETEEGEKFWIVRNSWGEYWGEGGWFRIKRGENQLLVESNCAWAVPGSWTNLH 770
+S LPHTY +P + W +++G + TR LNQHIPQYCGSCWAH ALS+LADRIKI R+ G DITL+IQ +LNC AG+CHGG Y+F + +PFE+CQ Y A A+ FPNATV E+G V G + + AE+F RGP+AC I A+ + DY GG++D+P+ +E DH+V++ GWG + + G+++WIVRNSWGEYWGE G+ R+ G+NQL +E++CAWAVPGSWT ++
Sbjct: 41 SSALPHTYTDFSALPQAWDWRSVNGTTYTTRTLNQHIPQYCGSCWAHGALSALADRIKIARKARGNDITLAIQYILNCGTEAAGSCHGGDHLAVYDFITQTGFVPFESCQLYAACSAESKEGTCKYGNYECSPINTCKTCSTFKDNGGVCNAIEIFPNATVKEFGRVHGAKHMKAEIFHRGPIACGINANKILDYKGGLVDVPDAGREIDHIVSVTGWGYDADAGKQYWIVRNSWGEYWGEMGYIRVVMGDNQLGLEADCAWAVPGSWTEVN 312 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig728.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig728.19.1 >prot_P-littoralis_Contig728.19.1 ID=prot_P-littoralis_Contig728.19.1|Name=mRNA_P-littoralis_Contig728.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=331bp MAEVFARGPVACDIAADALHDYTGGVIDIPEMPKETDHVVAIAGWGETEEback to top mRNA from alignment at P-littoralis_Contig728:81649..92269- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig728.19.1 ID=mRNA_P-littoralis_Contig728.19.1|Name=mRNA_P-littoralis_Contig728.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10621bp|location=Sequence derived from alignment at P-littoralis_Contig728:81649..92269- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig728:81649..92269- >mRNA_P-littoralis_Contig728.19.1 ID=mRNA_P-littoralis_Contig728.19.1|Name=mRNA_P-littoralis_Contig728.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=993bp|location=Sequence derived from alignment at P-littoralis_Contig728:81649..92269- (Pylaiella littoralis U1_48)back to top |