mRNA_P-littoralis_Contig727.45.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig727.45.2
Unique NamemRNA_P-littoralis_Contig727.45.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5L0H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H2_9PHAE)

HSP 1 Score: 546 bits (1407), Expect = 4.750e-182
Identity = 253/351 (72.08%), Postives = 284/351 (80.91%), Query Frame = 2
Query:  308 LVRPVFPSSTRDVAGRPCVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD--VGAGGDTSFHTLREELVDHFTYKKKKG*IVWFRSAAK*TK 1354
            +VRPVFP+   DV GR CVPLELKVLGVLQVLGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+ L++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF  R KID+AWFTACIIHNMLL FDGL  LE DM+W GKDGEAD TTG FPA T   S +  V    D +FH  R+ LVDHF + K    + WFR+    T+
Sbjct:  187 MVRPVFPAREHDVCGRLCVPLELKVLGVLQVLGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEGLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAFAKSSSEVQWFRAVGADTR 537          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 535 bits (1377), Expect = 2.990e-179
Identity = 250/348 (71.84%), Postives = 286/348 (82.18%), Query Frame = 2
Query:  275 VCHTSFSFVCGLVRPVFPSSTRDVAGRPCVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTV---GSMDVGAGGDT-SFHTLREELVDHFTYKK 1306
            V H  F     LVR VFP++TRDVAGR CVPLELKVLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +G PGAV S DCTH++W  C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWASYK+ L+ L+G ++ HTGGWLIVDGGYHRVP LICP+K YAS  QQEWSKRFES+RKDIEC FGRLKGRFRLFKTGILF +REKIDNAWFTACIIHNML QFDGLANLEKD++W GKDGEAD+TTG FP  T V      +V  G +T +F   R++LV+H  YKK
Sbjct:   78 VPHEFFRHFVDLVRTVFPTATRDVAGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWASYKFVLFDLEGNTTEHTGGWLIVDGGYHRVPSLICPFKEYASEAQQEWSKRFESIRKDIECLFGRLKGRFRLFKTGILFGTREKIDNAWFTACIIHNMLHQFDGLANLEKDVDWAGKDGEADQTTGAFPVPTAVVDTAGEEVDDGDNTEAFKLFRQQLVNHVAYKK 425          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5KRU1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRU1_9PHAE)

HSP 1 Score: 459 bits (1180), Expect = 7.400e-152
Identity = 209/287 (72.82%), Postives = 236/287 (82.23%), Query Frame = 2
Query:  446 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMD--VGAGGDTSFHTLREELVDHFTY 1300
            MS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV+RDLSV R++ EEPW SYKYE+Y   G  + HTGGWLI +GGYHRVPLLICP+K YA+V +Q+WSKR ESVRKDIEC FGRLKGRFRLFKTGILF  R KID+AWFTACIIHNMLL FDGL  LE DM+W GKDGEAD TTG FPA T   S +  V    D +FH  R+ LVDHF +
Sbjct:    1 MSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVVQRDLSVRRVEGEEPWVSYKYEMYDETGDVTEHTGGWLIAEGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDIECLFGRLKGRFRLFKTGILFGDRTKIDDAWFTACIIHNMLLAFDGLDQLEVDMDWEGKDGEADSTTGVFPAVTVADSAEDKVSGDDDAAFHAHRQCLVDHFAF 287          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5JY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY35_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 4.350e-127
Identity = 183/249 (73.49%), Postives = 203/249 (81.53%), Query Frame = 2
Query:  371 ELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNML 1117
             L+VLGVLQ LGRGNCFADVANFSLMS++TAE+SFHRFC CFA GLW  W+RLPEG+DL++VES Y  LG+PGAVGS DCTHV WERCA+SET  HKGKEGYT+VVFEAICDHAGRI+ASTKGYPGAENDKTVV                 YKYE+Y   G  + HTGGWLI DGGYHRVPLLICP+K YA+V +Q+WSKR ESVRKD+EC FGRLKGRFRLFKTGILF  R KID+A FTACIIH ML
Sbjct:    3 NLQVLGVLQALGRGNCFADVANFSLMSRTTAEQSFHRFCHCFAAGLWRTWIRLPEGEDLRRVESTYRSLGYPGAVGSIDCTHVPWERCAFSETTTHKGKEGYTTVVFEAICDHAGRILASTKGYPGAENDKTVV----------------IYKYEMYDETGDVTKHTGGWLIADGGYHRVPLLICPFKVYANVAEQQWSKRLESVRKDMECLFGRLKGRFRLFKTGILFGDRTKIDDARFTACIIHTML 235          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5K604_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K604_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 5.720e-99
Identity = 138/241 (57.26%), Postives = 182/241 (75.52%), Query Frame = 2
Query:  446 MSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTG 1168
            MS +TAEKSFH FC+ F+  LW  WV+LP GD+LK+VE ++ + G+PGA+ S DCTH  W     SE  ++ GKEGY +VV EA CDH GRIIA+TK YPG+ENDKT+++RD S+ RI+ EEPW+S KY+LY  DG+ + + G WL+VDGGY ++PLLI P K +A+VE+ +WS+R ES+RKDIEC +GR+KGRFRLFK GIL+ +R+ IDN WFTACI+HNML  +D L  + +   W G
Sbjct:    1 MSVATAEKSFHHFCEKFSAALWDTWVKLPVGDELKEVERVFRKSGYPGAISSTDCTHFRWPGGPSSEARMNTGKEGYPTVVVEATCDHTGRIIAATKSYPGSENDKTIIQRDKSIWRIRDEEPWSSLKYKLYNADGSETEYKGAWLVVDGGYQKIPLLIPPIKHHATVEEHDWSRRLESMRKDIECCYGRVKGRFRLFKAGILYKTRDSIDNPWFTACILHNMLHHYDKLDVMTEATGWQG 241          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 2.310e-91
Identity = 157/345 (45.51%), Postives = 214/345 (62.03%), Query Frame = 2
Query:  314 RPVFPSSTRDVAGRPCVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDG---EADETTGPFPAQTTVGSMD---VGAGGDTSFHTLREELVDHFTYKK-KKG*IVW 1327
            R  FP+   DV GR  VP+ELKVL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGAVGS D TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  I F+ +E IDN +FT CI+HNML  FD   ++ ++ NW G  G    AD    P    ++VGSMD        +T F  LR +LV +F Y++ KK  IVW
Sbjct:  153 RDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRD--PNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 495          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5K7N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7N8_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 5.810e-86
Identity = 139/257 (54.09%), Postives = 175/257 (68.09%), Query Frame = 2
Query:  485 CDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMDVGAGGDT 1255
            C+ F+ GLW  WV+LP GD+LK+VE IY + G+PGA GS DCTH  W  C +SE N H GKEGYTS+V E  CDH+GRIIA+TK  PGAENDKTV+ RD S+ RI+ EEPW SY             +T  W+IVDGGY ++PLLI P KT+ +VE+ +WS+R ES+RKDIEC FGR+KGR+RLF   ILF++R+K DNA FTACI+HNML  F+ L  +E+D +W G  G   E      A     +MDV    +T
Sbjct:   90 CEKFSEGLWDTWVKLPRGDELKKVEEIYRKCGYPGATGSTDCTHFRWPGCPFSEKNTHTGKEGYTSLVVECACDHSGRIIAATKTCPGAENDKTVIARDKSIWRIRDEEPWKSY-------------YTRAWIIVDGGYPKIPLLIPPIKTHNTVEEHDWSRRLESMRKDIECCFGRVKGRWRLFGGDILFSTRQKGDNACFTACILHNMLHSFNRLDEMEEDADWVGSAGRLGE------AAAVAAAMDVDEESET 327          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5K8G0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G0_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 1.640e-85
Identity = 132/202 (65.35%), Postives = 156/202 (77.23%), Query Frame = 2
Query:  326 PSSTRDVAGRPCVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPY 931
            PSS    A R     +  VLGVLQVLGRGNCFADVA  SLMS+ TAEKSFHRFCDCF+ GLWHQWV LPEG+ LK+V   Y  +  PG V S DCTH++   C +SETN HKGKEGYT++V+EA CDH+GRI++STKG+PGAENDKTVVKRDLSV R++ EEPWA YK+ L+ L+G ++ HTGGWLIVDGGYHRV  +   Y
Sbjct:   85 PSSREAKAFRS--DFQGSVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAGEYGDMVCPGVVASVDCTHISLPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTKGFPGAENDKTVVKRDLSVLRMREEEPWARYKFVLFDLEGNTTEHTGGWLIVDGGYHRVSSVWVSY 284          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.800e-85
Identity = 149/337 (44.21%), Postives = 207/337 (61.42%), Query Frame = 2
Query:  341 DVAGRPCVPL-ELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDG---EADETTGPFPAQTTVGSMD---VGAGGDTSFHTLREELVDHFTYKK-KKG*IVW 1327
            D++ R C P    +VL  LQ+L RGN FAD+ + S +S  T   +FHRFC  FA  L+ ++V LP G+DL++V   Y+++GFPGAVGS D TH+ W  C Y++  I+ GKEG  +V F+   DH+GR++A T+G+ GA NDKT+++ D +V RI+ +  +   KY+LY  DG      G +L+VD GYH+   LI P K         +SKR ES RKD+EC+FG LKGRFR+ K  I F+ +E IDN +FT CI+HNML  FD   ++ ++ NW G  G    AD    P    ++VGSMD        +T F  LR +LV +F Y++ KK  IVW
Sbjct:   70 DLSARCCFPPPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRD--PNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVW 404          
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 285 bits (730), Expect = 6.300e-83
Identity = 138/348 (39.66%), Postives = 208/348 (59.77%), Query Frame = 2
Query:  314 RPVFPSSTRDVAGRPCVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGLWHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIHKGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHEEPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQEWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIHNMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMDVGAGG----------DTSFHTLREELVDHFTYKKKKG*IVW 1327
            R  FP+  +D +GR  +P++LKVL  LQ+L RGNCFAD+ + S +S  TA  +FHRF   FA  ++ + + LP GD  K+V + Y++LGF GA GS D TH+ W  C Y++   + GKEGY +V ++   DH  R++A T G+ G+ NDK++++ D +V +I+ +  ++  ++ +Y  DGT     G +L+VD GYH+   LI P K         +SKR ESVRKD+ECFFG +KGRFR+ K  I ++ +E IDN +FT CI+HNML  +D  + +E++ NW G  G        +    ++    VGA G          ++ F+T R++L+  F Y+K K  I W
Sbjct:  137 RDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAG----LHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAW 480          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig727.45.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0H2_9PHAE4.750e-18272.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE2.990e-17971.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRU1_9PHAE7.400e-15272.82Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JY35_9PHAE4.350e-12773.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K604_9PHAE5.720e-9957.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE2.310e-9145.51Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7N8_9PHAE5.810e-8654.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8G0_9PHAE1.640e-8565.35DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.800e-8544.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE6.300e-8339.66Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig727contigP-littoralis_Contig727:118116..122849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size2853
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.28e-65
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1260
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791509.2812004-UTR-P-littoralis_Contig727:118115..1181731680791509.2812004-UTR-P-littoralis_Contig727:118115..118173Pylaiella littoralis U1_48UTRP-littoralis_Contig727 118116..118173 +
1680791509.329282-UTR-P-littoralis_Contig727:121314..1228491680791509.329282-UTR-P-littoralis_Contig727:121314..122849Pylaiella littoralis U1_48UTRP-littoralis_Contig727 121315..122849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791509.2937553-CDS-P-littoralis_Contig727:118173..1184941680791509.2937553-CDS-P-littoralis_Contig727:118173..118494Pylaiella littoralis U1_48CDSP-littoralis_Contig727 118174..118494 +
1680791509.305147-CDS-P-littoralis_Contig727:119542..1200701680791509.305147-CDS-P-littoralis_Contig727:119542..120070Pylaiella littoralis U1_48CDSP-littoralis_Contig727 119543..120070 +
1680791509.3150704-CDS-P-littoralis_Contig727:120903..1213141680791509.3150704-CDS-P-littoralis_Contig727:120903..121314Pylaiella littoralis U1_48CDSP-littoralis_Contig727 120904..121314 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig727.45.2prot_P-littoralis_Contig727.45.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig727 118174..121314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig727.45.2

>prot_P-littoralis_Contig727.45.2 ID=prot_P-littoralis_Contig727.45.2|Name=mRNA_P-littoralis_Contig727.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=420bp
MATWREGSRGMMKKTKLRNSKTRTASAHASHGHARSTTRPPGARDWHCWK
AFERTTVFTKIAVRQRRSGRTSVCHTSFSFVCGLVRPVFPSSTRDVAGRP
CVPLELKVLGVLQVLGRGNCFADVANFSLMSQSTAEKSFHRFCDCFAGGL
WHQWVRLPEGDDLKQVESIYNQLGFPGAVGSADCTHVAWERCAYSETNIH
KGKEGYTSVVFEAICDHAGRIIASTKGYPGAENDKTVVKRDLSVNRIQHE
EPWASYKYELYGLDGTSSWHTGGWLIVDGGYHRVPLLICPYKTYASVEQQ
EWSKRFESVRKDIECFFGRLKGRFRLFKTGILFNSREKIDNAWFTACIIH
NMLLQFDGLANLEKDMNWTGKDGEADETTGPFPAQTTVGSMDVGAGGDTS
FHTLREELVDHFTYKKKKG*
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mRNA from alignment at P-littoralis_Contig727:118116..122849+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig727.45.2 ID=mRNA_P-littoralis_Contig727.45.2|Name=mRNA_P-littoralis_Contig727.45.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4734bp|location=Sequence derived from alignment at P-littoralis_Contig727:118116..122849+ (Pylaiella littoralis U1_48)
GCGTCTATGATGGGCCAGATGCAGGGCATGAGCAAAACCTTCTCAGACTT GTTCGACGATGGCAACGTGGCGGGAGGGAAGCCGTGGGATGATGAAGAAG ACGAAGTTGAGGAATTCGAAAACGAGAACGGCAAGCGCACACGCGAGTCA CGGCCACGCCCGCAGTACCACACGTCCGCCTGGGGCGCGCGATTGGCACT GTTGGAAAGCCTTCGAAAGGACAACCGTCTTCACCAAAATAGCCGTGAGG CAAAGGCGTTCAGGTCGGACTTCCGTGTGCCATACGAGTTTTTCCTTCGT TTGTGGACTGGTGAGGCCGGTCTTCCCATCTTCTACAAGAGACGTCGCTG GGCGTCCCTGCGTCCCCTTGGAGTTGAAGGTGGGTGCGATTGAGACTGAA GCTTTGTCATGTTGGACTCGGCAGTCTCTTCTACATGTGAATGCGTTGGT GTGGATGTGTTCAAGGTCATGTCGCACATGGGAATACAGCAGTACAGCAT ATTACCAGGTACCGGTATGTATCATATGATGATAAATCGTATACTGCTAC AAACTAATGATACGTGTGCAGACTGGGAAACCGCTCCGCATCAACAACAG CGCTACGATCTGTTTTCACAGCACTCCCTACAGCAGGTCCTGGTGTCGCG TTGAAAAATGGTACGCTACAGCAGTACCGTAGTATATTGCTGTACTCGTA GCACTCGCGCCCACAGAAAAAACAGCACCATTATATCCGAATGTATGCGT ACGTACGTAGTACTTCGAAGTACGTAAACAGCAGTCCACGCCACAGAGAC ATGTTGTAGTGTCCCGGCCAAGGACTGCGTGTCAACAGCAGTACACCTCT ACCACAGTTGTCCCCGTTATTATCCACAGGCCTCGGTCTGCGGAAGTGCG TGTGGGATCGAATTCGACGCGTAGCACCGCTGTAGACGCGCAGTCTATCA GACGTACATGATACTTCGAAGTATGAAAAATACAGCATACAGCAGTACGA CGTTTGTACGAGTACGTGATACGCTGAGCGCAAGGAGGCATGTTTTTTTT TCCATCGGCTGCGTGTCGAAGCACAAGCTCGTGCCACTTTTTCTCCTCGT ACTCATCGACGGACACCAGTCTGCTGAAGGGCGCGAGCTTGTATTTTGGT TAAGCTACTGCTGTAAACGTGAACACGCAGTGGATGACACCGGAGATTAG GTTTGCGCCAGCTACTTCTGTAGACACGATACCAGCAGTGGTAGATGCTC GTATGCCCGTATAAAATCTAGTCGTACTGACTATGGTAGCGTTTTTCTGT TGAAATATAACCTCTGGATGAAGTGCAATCAAATGTTGCCGTCTTCGCAG CCAGCGTATCTAACGAATACCTCCATTACTTACCGCTGCCTCTGTAACAC CTACTCTTGGTTTGTCGAAATAAACAGGTGCTGGGGGTGCTGCAGGTATT GGGTAGAGGCAACTGCTTCGCGGATGTTGCGAACTTTTCGCTGATGAGCC AATCTACGGCGGAGAAGTCCTTTCACCGTTTCTGCGACTGCTTCGCGGGG GGCTTGTGGCATCAGTGGGTTCGGCTGCCTGAGGGCGATGACCTCAAGCA AGTGGAGAGCATCTACAACCAGCTGGGTTTTCCGGGGGCCGTAGGGTCAG CCGACTGCACCCACGTGGCGTGGGAGCGTTGTGCTTATTCGGAAACGAAT ATCCACAAGGGGAAGGAGGGGTACACGTCGGTTGTGTTCGAGGCGATTTG TGACCACGCTGGCCGCATCATCGCGTCGACGAAGGGGTACCCCGGGGCGG AGAACGACAAAACGGTGGTCAAGCGCGACTTGTCCGTCAACCGGATCCAA CACGAGGAGCCGTGGGCGAGCTACAAGTACGAGCTGTACGGTCTTGATGG CACGAGTTCGTGGCACACGGGGGGGTGGCTGATCGTCGACGGGGGGTACC ACCGGGTGAGTAAATTGTATGACGTGAGGGCAATGGTGTCGATGAAACCA TGAGCGATTGTGAGGTGTGCAGGTATAAATAGAGAGGAACCCCCCACGCC CTGCAAAGCACAAGTGTGGTGCCGAAGTGTTGCTGTTGTCTTTCCATGGA TACCCCTCGTGCATGCCTTGAGGGCAATGGTTTCCATTGGGTTGTTGCAG AGAGTTGCAGGTAAGAATAGAGAGTACCCCCCCCCCCCCCCCCCCCGCAA AGCATTGAGTCGTACCGAAGTGCAGCTGTTGTCTTTCCAAGAACCCCCTG CCTCCCCGTCGAGGGGGAACCAGCCCGCTGTATTTTTCTCTAGTGTACCT TTTACGCAGACCAGAGAACCACTTGCTCCTGTTCACTTTTGCATCTGATG TCGGATGTAGAACCCGCTGAACTAAGACCAGCTATCCCATTTGTGGGCGC CCCCCCGACGTGTGTGTTGCCGGACATTAGTTGTTCTAGGTAACAATACC ACAGGCCCATCACCTCGCATATTGGTCGCTTATCACCCTCCTGATCATGC ACATTGCATCGCGATCTTGCGGTCTTGCGGCACGTAGCCCCCACTCGACA GAAGCATCTGATCAGCATCGATATGAGGTATCCGGTTGCTCTCGTAATAT CTCCGAGGATTGGTGGCTGCGGCCTACATTTTCTCTCCGGTTTGCAGTCA ATCGAGAGTCCCACGTTTTTTTTTATGCATTACTTCTTTCGAGGTTTTAA AACTGAATTTCCGGATCGACGAAACATAGGCCCATACCACATTCATTTTT CCCTTCTTTCGCCCCTGCTCTTTTTGGCCGTACACCAGGTGCCCCTTCTC ATATGCCCGTATAAAACGTACGCGAGCGTTGAACAGCAGGAGTGGAGCAA GAGATTCGAGTCAGTACGCAAGGACATCGAGTGCTTTTTCGGAAGACTCA AGGGGCGGTTCAGGTTGTTCAAGACCGGCATTTTGTTCAACAGCCGGGAG AAGATCGACAACGCCTGGTTCACGGCTTGCATCATTCACAACATGCTCCT GCAGTTTGACGGCCTGGCCAACCTTGAGAAGGACATGAACTGGACGGGCA AGGATGGAGAGGCGGACGAGACCACCGGCCCTTTCCCCGCACAGACGACT GTTGGCAGCATGGATGTGGGAGCCGGCGGCGACACTAGCTTCCACACGCT CAGGGAGGAACTGGTGGACCACTTCACATACAAGAAGAAGAAGGGGTAAA TTGTCTGGTTTCGGAGCGCGGCTAAATGAACAAAATTCACGGTAGCGCAG AACCTGTGTTGTCCGGTAGGAGAATGGGTAGTCATTTCAATCGGCCCCGT TCAACCTTTTGGAGGGGATGCGGTTGGGTGAGTGTGTATGCTCGCCCGCC GTTTTTCTGTGTTGTTTGGTGTTCGGGTTTTGTGCCTGGGCATGTCCCAT CCCCCAACCCTCTTATATGTTGTTGTTATGTTTTGCCTTACCTCCCCCCC CTCGCGCTCAAAAGGAGACATTGTGTTGTAATTTTCGGTGGTTGTTGTCT GAATATCCCCCCCCCTCAACGTTTTTGTGGCGTTGTGTCTCATGGCGATC TTCTGAGCACCACCCCACCACCACCTGCCACTTTTTATTGGCGTTCTTTT GTTTTTTGGTGGAACACCCCCCCCCCCGAACAAACACTTGATTAGTGTAT GTGTTGTGTTTTGTTGTCCCCCTGTTTTGGTATGGTGTTTTAGGTGATTG CTTCCCGACACCCTGCCCTGCCGTGCCtTTTTTTTGTGCCGACGTAGCTT TTCCATTACCTGAACAATCTCCCCTGCCTCGCACTTTTTATTCGTGGTTG TGGCGTTTGTGTTTGCCTGAACACCCCCCGAACCCTAGCCCCCCACCTTT CCTGGTGTTGATTACTTCGAAGTACTTCAGTAGTTTTTTGTTGAAATGAA CACCGCACCCCCgACAAGAAACTCTTGTTGGTGTCGTTTTTTTTTGTTCG TCCTCTGAACACCCCGCTTTTATGTGGCGTTGTGCATGCGGCGAGTGCTC CCACCCACTCCGCCTCGTGCATCCATGTTTGGAGCTGGATTTTTGGTTGC GTTTGTTTGAACATTCTCCACCGCTACACGTTTTTCTATTTGTGTGCGAG TGCTTGAACCCCCTCCCCCTAGCGTATCTTTTTCTGGAGCTGCTGTTTTG TTTGTGTGCCAGGTATGTTTAAACGTTTGCCACCTTTTTCTGTGTGTTGT GATGGTTACCAGGGCAACGAGTCAGATACATGATTTCGGTGTTTTCGATT GCATCTTGCCATGTTATGCAAGTTGATTTTGGTGGTTGCTGTATTTTCAA AGCGAGTTGATCGTCGACGTAGCCCTCAATTTTGTTTTGTTGTTGTCACT GCAGCTAAGTGAATGCCCTCGCGTTGGCTTTTGGACGGAAAAATTAGTGC CATGTCCGCAGCACTCGTTCGCTTTTTTCATTGTATTTTTGATATTGCAC GAGGTCACTTTTGATGTGTGTTGCGGCGTTGTTTACCTGGGCACCCCACA CATGATTTTGGTGTCTTGATTGTATCTTGCCGTATGTTTTTGTCGTTGCT ATATTTGCATTGCTTTCATACCATCGCGACGAGTGTTGTTGGCGCTGCCT GTCTCAAGTAAACTATTCTTGGAGGGGTTTTGCATGCCGGGGTTGACAAG GTGTTGTGGAAAGTGGTGCAGGCACTACCAGTTCGGCGGATTTGTCGTTC GTGAGTGATCCAGGGGCGATACGGTACCCGAGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig727:118116..122849+

>mRNA_P-littoralis_Contig727.45.2 ID=mRNA_P-littoralis_Contig727.45.2|Name=mRNA_P-littoralis_Contig727.45.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1260bp|location=Sequence derived from alignment at P-littoralis_Contig727:118116..122849+ (Pylaiella littoralis U1_48)
ATGGCAACGTGGCGGGAGGGAAGCCGTGGGATGATGAAGAAGACGAAGTT
GAGGAATTCGAAAACGAGAACGGCAAGCGCACACGCGAGTCACGGCCACG
CCCGCAGTACCACACGTCCGCCTGGGGCGCGCGATTGGCACTGTTGGAAA
GCCTTCGAAAGGACAACCGTCTTCACCAAAATAGCCGTGAGGCAAAGGCG
TTCAGGTCGGACTTCCGTGTGCCATACGAGTTTTTCCTTCGTTTGTGGAC
TGGTGAGGCCGGTCTTCCCATCTTCTACAAGAGACGTCGCTGGGCGTCCC
TGCGTCCCCTTGGAGTTGAAGGTGCTGGGGGTGCTGCAGGTATTGGGTAG
AGGCAACTGCTTCGCGGATGTTGCGAACTTTTCGCTGATGAGCCAATCTA
CGGCGGAGAAGTCCTTTCACCGTTTCTGCGACTGCTTCGCGGGGGGCTTG
TGGCATCAGTGGGTTCGGCTGCCTGAGGGCGATGACCTCAAGCAAGTGGA
GAGCATCTACAACCAGCTGGGTTTTCCGGGGGCCGTAGGGTCAGCCGACT
GCACCCACGTGGCGTGGGAGCGTTGTGCTTATTCGGAAACGAATATCCAC
AAGGGGAAGGAGGGGTACACGTCGGTTGTGTTCGAGGCGATTTGTGACCA
CGCTGGCCGCATCATCGCGTCGACGAAGGGGTACCCCGGGGCGGAGAACG
ACAAAACGGTGGTCAAGCGCGACTTGTCCGTCAACCGGATCCAACACGAG
GAGCCGTGGGCGAGCTACAAGTACGAGCTGTACGGTCTTGATGGCACGAG
TTCGTGGCACACGGGGGGGTGGCTGATCGTCGACGGGGGGTACCACCGGG
TGCCCCTTCTCATATGCCCGTATAAAACGTACGCGAGCGTTGAACAGCAG
GAGTGGAGCAAGAGATTCGAGTCAGTACGCAAGGACATCGAGTGCTTTTT
CGGAAGACTCAAGGGGCGGTTCAGGTTGTTCAAGACCGGCATTTTGTTCA
ACAGCCGGGAGAAGATCGACAACGCCTGGTTCACGGCTTGCATCATTCAC
AACATGCTCCTGCAGTTTGACGGCCTGGCCAACCTTGAGAAGGACATGAA
CTGGACGGGCAAGGATGGAGAGGCGGACGAGACCACCGGCCCTTTCCCCG
CACAGACGACTGTTGGCAGCATGGATGTGGGAGCCGGCGGCGACACTAGC
TTCCACACGCTCAGGGAGGAACTGGTGGACCACTTCACATACAAGAAGAA
GAAGGGGTAA
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