prot_P-littoralis_Contig727.17.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig727.17.1
Unique Nameprot_P-littoralis_Contig727.17.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length84
Homology
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BLAST of mRNA_P-littoralis_Contig727.17.1 vs. uniprot
Match: A0A6H5JEY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY4_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 8.510e-9
Identity = 32/52 (61.54%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:    1 MGSDKDEKIARG-GPLSILVHEWARVQRELLRLERDEEISQVADTITQLTAQ 51
            M ++  +  ARG GP+SI  +EWARVQR+LLRLERDEE+ QVA  + QLTAQ
Sbjct:    1 MSNNDTDSTARGTGPVSI--NEWARVQRKLLRLERDEEVEQVAGMLNQLTAQ 50
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BLAST of mRNA_P-littoralis_Contig727.17.1 vs. uniprot
Match: D7G8K5_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K5_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.520e-7
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    3 SDKDEKIARGGPLSILVHEWARVQRELLRLERDEEISQVADTITQLTAQ 51
            +D D      GP+SI  +EWARVQR+LLRLERDEE+ QVA  I QLTAQ
Sbjct:    4 NDTDSTARDTGPVSI--NEWARVQRKLLRLERDEEVEQVAGMINQLTAQ 50
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig727.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JEY4_9PHAE8.510e-961.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8K5_ECTSI1.520e-763.27R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig727contigP-littoralis_Contig727:63444..64659 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig727.17.1mRNA_P-littoralis_Contig727.17.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig727 63310..68679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig727.17.1 ID=prot_P-littoralis_Contig727.17.1|Name=mRNA_P-littoralis_Contig727.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=84bp
MGSDKDEKIARGGPLSILVHEWARVQRELLRLERDEEISQVADTITQLTA
QMSEGTERTRQQARALGWGGGEGQYQERGRHTR*
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