mRNA_P-littoralis_Contig727.8.8 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: D7G8K2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K2_ECTSI) HSP 1 Score: 370 bits (950), Expect = 9.220e-118 Identity = 254/415 (61.20%), Postives = 285/415 (68.67%), Query Frame = 3
Query: 435 LSRLQTMLQQKLVLKYGSKRNLSSKLNQEIEEEVAAFTARTSRQPTDEEFMVLENTIRDLRAKYVKNGDGXXXXXXXXXXXXXXXXXXXXRTCSTAXXXXXXXXXXXKPEGGEGDGENSSGGHSDEG---LPPSIARAWRTFDVAKQIEYETKEEHKAEKARLQKIIFKEELEVHRAQRAKKXXXXXXXXXXXXXXQEKRLANFRMEQEAIKKRAADKHAEEKALREXXXXXXXXXXXXXXXXRMEKEIHDIELCRAQLQGEVDEVERKRKMEKDRLAAIQAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQR 1670
+SRL+TMLQQKLV KYGSKRN++S+LN EIEEE D E N G S+GG D G LPPSIARAWRTFDVAKQIEYETKE+ K+EKA+ QKIIF+EELEVHRA++A+K XXXXXXXXXX E++LA F MEQEAIKKRA+DKHAEEKAL R+++E+ DIE C+A+LQGEVDE +RKRK EKDRLAAIQAENAKQREIREQRQRESD ADALLLKEHR+RMDAEEQ RAAKL+QRMK YEDIGNFWS+R+AGNTEA+VELREAQQTLKAARRKEEATLERERKEREAR+ A + M AENQKVI EK AL AKKHKEDM+FAQR
Sbjct: 1 MSRLKTMLQQKLVQKYGSKRNVNSRLNLEIEEE-------------DNE-----------------NSPG-----------------------------------------------GSAGGVDDVGDGLLPPSIARAWRTFDVAKQIEYETKEQQKSEKAKQQKIIFREELEVHRAKQAEKKAVEXXXXXXXXXXXERKLAEFHMEQEAIKKRASDKHAEEKALXXQQVKRLQAEKEIERQARLDEEMLDIERCKAKLQGEVDEADRKRKSEKDRLAAIQAENAKQREIREQRQRESDAADALLLKEHRQRMDAEEQARAAKLKQRMKRYEDIGNFWSERQAGNTEAEVELREAQQTLKAARRKEEATLERERKEREARRIAGMVMAAENQKVIQEKNALNAKKHKEDMEFAQR 338
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A835ZGD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGD1_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.690e-25 Identity = 109/364 (29.95%), Postives = 180/364 (49.45%), Query Frame = 3
Query: 813 GLPPSIARAWRTFDVAKQIEYETKEEHKAEKARLQKIIFKEELEVHRAQRAKKXXXXXXXXXXXXXXQEKRLANFRMEQEAIKKRAADKHAEEKALREXXXXXXXXXXXXXXXXRMEKEIHDIELCRAQLQGEVDEVERKRKMEKDRLAAIQAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARRVHEDMNDTEYRMNSDLVKRLEADKKMVAQVRQRMESA 1904
G + R W F VAKQIE E K++ + + +L++ K++L+ + A + + L +R EQ+A+K + A H EE+ +RE + E K+ E+ RL I+ ENA R I EQR +E+ E D L++E++ R+D EE RA KL++ IG FW+++ AG EA+ + R + A KE A + RE +RE ++T + +N+ + E++ +A + +++ + + SEA +Q E K +KR AM +Y +LE Q+ ETR R DM++TE +N+D++ RLEAD + +V+ RM +A
Sbjct: 54 GREEQLVRNWCAFAVAKQIEDEEKKQREQTRKKLEQERLKQDLKRQMEEHALRHRSEALERKMLREASTEDLQRWRAEQDAVKAQIAATHDEERRIREDQIANTRSRQQAEHDSEVXXXXXXXXXXXXXXXXXXXXAEEKKAAERARLERIKQENAAHRIILEQRAKEAAEQDMRLMQEYKERLDKEEADRAEKLRR-------IGAFWTEKGAGKKEAEEQRRAEALIVAEANAKERADIARELHDREKKRTGCINTALQNRLAMEERRRRQADEQEKERVYLETARKLSEADKQAEAAKRQRKRSAMLRYTAELERQMAETRRMRQQVDMSETEALLNADMIARLEADVALQGKVKARMGAA 410
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A7S2C158_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C158_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.930e-17 Identity = 134/525 (25.52%), Postives = 232/525 (44.19%), Query Frame = 3
Query: 369 ATSSTRRNKLRLIQERETAKARLSRLQTMLQQKLVLKYGSKRNLSSKLNQEIEEEVAAFTARTSRQPTDEEFMVLENTIRDLRAKYVKNGDGXXXXXXXXXXXXXXXXXXXXRTCSTAXXXXXXXXXXXKPEGGEGDGENSSGGHSDEGLPPSIA----------RAWRTFDVAKQIEYETKEEHKAEKARLQKIIFKEELEVHRAQRAKKXXXXXXXXXXXXXXQEKRLANFRMEQEAIKKRAADKHAEEKALREXXXXXXXXXXXXXXXXRMEKEIHDIELCRAQLQGEVDEVERKRKMEKDRLAAIQAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIME-KQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARRVHED---MNDTEYRMNSDLVKRLEADKKMVAQVRQRMES 1901
A S +RR K+ ++ERE + +RLQ+ML QKL+ KYG + S+ N I++ VAAF +T TD+ + LE ++ + A P+ + SG S G+ + W D IE E + +KA+ ++ FK L+ + + K Q L ++ Q+ ++ K EEK RE R EI ++++ R ++Q + K+ EK+RL I+ EN K+R +R++R E D L++E++R+++ EE RA ++R+ E G+ W++ AG + DVE R L+ A +K+ A ERER+++ A + K+ AE K +ME K + E+M +AQ+F E +++EE IN+K +A K + + Q+ E AR+ D M+ +E ++N+ L+ +L D + ++ Q++ +
Sbjct: 43 AMSDSRRRKIEGLRERERLREYRTRLQSMLNQKLLTKYGDIKTRGSRKNDAIKKTVAAFMKQTG-PITDQHLVQLEQQVKQVVADLAN------------------------------------------PQTSARPASSGSGMPSGNGMVGKLRAQTAGVKKDYNEWTILDAYNAIEAEEGAQATYKKAKSKQREFKTLLDKQVQECSGKGSNEKDEEKQYVAKQNYLLEEWKTGQQKVQMTIRGKLEEEKRAREGQISERQQRKKTELAARRAAEIQELDIVRQEIQRQEQMAIDKKIKEKERLKGIRLENEKERLVRKKRAEEEAAEDQRLMEEYKRKLEQEEVDRANAFKRRLDKLEATGSKWAEEGAGKEQMDVEKRLEAMVLREAAKKDAADEERERRDKAALKY-NAKLMAETNKSLMESKVRAGTAQQAEEMKYAQQFRTAGEDYQREE---INRK-IAKRKAMQAHQAQLMEQIARKKAVDKFAMSGSERKVNAALLNKLTNDPVFMEKLDQKLRA 519
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A7S1TW05_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TW05_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 2.560e-17 Identity = 83/286 (29.02%), Postives = 154/286 (53.85%), Query Frame = 3
Query: 1059 KKRAADKHA---EEKALREXXXXXXXXXXXXXXXXRMEKEIHDIELCRAQLQGEVDEVERKRKMEKDRLAAI----QAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARRVHEDMNDTEYRMNSDLVKRLEADKKMVAQVRQRM 1895
KK A +HA EE+ +R R +E+ +I C+ +Q DE RKR+ E +RL I Q ENAK+ E+ ++ E D L++E++ +++ E+ R ++RM+ YE G W+ + AG + + ELR + L+ A++KE+A +ERER+++E +T L + A N+ ++ EK+ ++H M +A F + E + ER + +R K+ L+ Q++ R RR +M+D E +N +++++++ D +MV++++ R+
Sbjct: 310 KKSRAKRHAVAVEERQVRAQQIKDTNSRRKAEFDKRRAEEMEEIRRCKDAIQFTRDEEARKRREEHERLKKILIENQIENAKRAEVAKEEAAE----DVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKKEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 591
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A836CRB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRB1_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.970e-15 Identity = 123/385 (31.95%), Postives = 190/385 (49.35%), Query Frame = 3
Query: 765 GGEGDGENSSGGHSDEGLPPSIARAWRTFDVAKQIEYETKEEHKAEKARLQKIIFKEELEVHRAQRAKKXXXXXXXXXXXXXXQEKRLANFRMEQEAIKKRAADKHAEEKALREXXXXXXXXXXXXXXXXRMEKEIHDIELCRAQLQGEVDEVERKRKMEKDRLAAIQAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNT-EADVELREAQQTLK---AARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARRVHEDMNDTEYRMNSDLVKRLEADKKMVAQVRQRMESAH 1907
G GD S G S + L AR WR FD+AKQIE+E + K +A L++ + +L + Q +R + EQ A + + ++H XXXXXXXXXXXXXX R + E H E+ LA + AE A +DE DA L++E+R R+D EE RA KL++RM+ YE IG +W +GN E EL + ++ AAR E+ ERER++ E R+ + +N++ + E+ ++ + + A+ D+EAF+Q E+++I KKR+AM KYR +L+ M +TE +NSD+VKR++AD ++ +VR+R+ +A+
Sbjct: 424 GSAGDARGGSAGASADDL----ARDWRAFDMAKQIEFEDTQARKKMRAALEQARLRHQLSGQVRDHMSREQQAALERQAELDAQAERRRQWDAEQAAARAKIQERHX---XXXXXXXXXXXXXXXXXXAERADAERH----------------------ERVALAKV-AEQA------------ADE-DARLMEEYRLRLDREEAERARKLKERMQKYEKIGAYWQD--SGNVREQAAELDRLEANIQEEFAARAHAES--ERERRDWEKRRIGCMAAALDNRRTVQERNRRSEEEAERERQLAETARADAEAFKQAEKERIEKKRLAMTKYRAELDKXXXXXXXXXXXXXMTETEALLNSDIVKRIQADARLQQRVRERLGAAY 761
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A7S1TWB0_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWB0_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.430e-15 Identity = 65/222 (29.28%), Postives = 128/222 (57.66%), Query Frame = 3
Query: 1242 EKDRLAAI----QAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARRVHEDMNDTEYRMNSDLVKRLEADKKMVAQVRQRM 1895
E++RL I Q ENAK+ E+ ++ E D L++E++ +++ E+ R ++RM+ YE G W+ + AG + + ELR + L+ A++KE+A +ERER+++E +T L + A N+ ++ EK+ ++H M +A F + E + ER + +R K+ L+ Q++ R RR +M+D E +N +++++++ D +MV++++ R+
Sbjct: 19 ERERLKKILIENQIENAKRAEVAKEEAAE----DVRLMEEYKAKLEREDLERKRAFEKRMERYEAYGRLWADKGAGKKQREEELRIERVILREAKKKEDADIERERRDKEYLRTTALSIAASNKNLMEEKRRRMKEEHDASMIYAMSFRGEGEQYVAAERARAAARREEAKKHAAFLKEQIEGDRQRRQAVEMSDAERSVNREVLRKVKEDPEMVSRIQARL 236
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Match: A0A7S2WFB5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB5_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.520e-12 Identity = 67/242 (27.69%), Postives = 134/242 (55.37%), Query Frame = 3
Query: 1188 CRAQLQGEVDEVERKRKMEKDRLAAIQAENAKQREIREQRQRESDEADALLLKEHRRRMDAEEQTRAAKLQQRMKHYEDIGNFWSKRRAGNTEADVELREAQQTLKAARRKEEATLERERKEREARQTATLKMTAENQKVIMEKQALRAKKHKEDMDFAQRFINDSEAFRQEERDKINKKRVAMAKYRKDLEIQVQETRARR---VHEDMNDTEYRMNSDLVKRLEADKKMVAQVRQRMESA 1904
C+ ++ E +V+ + E +R+ ++ +N K+R+IR QR+++ D L++ ++ +++ EE RA ++RM+ + G W++ AG + + E + QQ L A RKE+A LERER++++A + M N+K+I K+ +K +ED FA++ D + F + E K +K + M +++ L Q+ + M+D E ++N +L+K+L + +++ +V R+ +A
Sbjct: 264 CQEEIIAEQRKVQAAKDAEAERMRQVKLDNLKERQIRMQRKQQEALEDQRLMEAYKAKLEREEVERANAFERRMERLQASGQKWAEEGAGKEQLEFEQKLEQQILGEALRKEQADLERERRDKQAIKDKQRLMAESNRKLIEAKKLRMQRKQQEDQSFAEKSQRDQKEFFESEARKKKEKALLMNQHQIALSQQIHHRSNNPTDPMKASMSDHERKINGELLKKLHQEPELLLKVANRVHAA 505 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig727.8.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig727.8.8 >prot_P-littoralis_Contig727.8.8 ID=prot_P-littoralis_Contig727.8.8|Name=mRNA_P-littoralis_Contig727.8.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=516bp MQATSSTRRNKLRLIQERETAKARLSRLQTMLQQKLVLKYGSKRNLSSKLback to top mRNA from alignment at P-littoralis_Contig727:22842..37707+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig727.8.8 ID=mRNA_P-littoralis_Contig727.8.8|Name=mRNA_P-littoralis_Contig727.8.8|organism=Pylaiella littoralis U1_48|type=mRNA|length=14866bp|location=Sequence derived from alignment at P-littoralis_Contig727:22842..37707+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig727:22842..37707+ >mRNA_P-littoralis_Contig727.8.8 ID=mRNA_P-littoralis_Contig727.8.8|Name=mRNA_P-littoralis_Contig727.8.8|organism=Pylaiella littoralis U1_48|type=CDS|length=1548bp|location=Sequence derived from alignment at P-littoralis_Contig727:22842..37707+ (Pylaiella littoralis U1_48)back to top |