prot_P-littoralis_Contig727.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig727.61.1
Unique Nameprot_P-littoralis_Contig727.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length137
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig727.61.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 9.640e-5
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:   49 SQDLDFVRLVRVYNNEELRQMISKEESC-NSESAMYMVVSASCPAYYAEVEETGSGSRTELEI 110
            S DL FVRLVRV +NE L++M  K +   +SE+ +Y+ V+ SCPAYYA  E+    S T  EI
Sbjct: 1002 STDLQFVRLVRVADNELLKKMCPKNQVVKHSEAGLYLRVAESCPAYYACCEQGKDKSSTHHEI 1064
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig727.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK41_9PHAE9.640e-549.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig727contigP-littoralis_Contig727:132066..132476 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig727.61.1mRNA_P-littoralis_Contig727.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig727 132066..133360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig727.61.1 ID=prot_P-littoralis_Contig727.61.1|Name=mRNA_P-littoralis_Contig727.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=137bp
MSEPCSRPKRTSYTPPGLVVFRSGEKSSSEITLKKQFQAAVGSTTTKLSQ
DLDFVRLVRVYNNEELRQMISKEESCNSESAMYMVVSASCPAYYAEVEET
GSGSRTELEIIASKAFADKSTPMTEFLGPMAPGMKMN
back to top