prot_P-littoralis_Contig724.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig724.6.1
Unique Nameprot_P-littoralis_Contig724.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length436
Homology
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BLAST of mRNA_P-littoralis_Contig724.6.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.540e-14
Identity = 61/131 (46.56%), Postives = 74/131 (56.49%), Query Frame = 0 
Query:  273 PRYGRDLSP--GGQGYPGKP--TPHPAGAAASFPYNGVGSDGGARLAELRGLPPPSSTTEREAGRDGG------------QQQQHDAIADYGALSAASGRTWRSSSIASDDGGGSMSASVVGDSEDCGSVA 387
            PR+GRD S   G   +P  P   P PAG   +FP+N +GSDG    A+LR LPPP S  ER  GR+ G                           +ASGRTWRS S+AS+DGGGS+SAS +GDSEDCGSV+
Sbjct:  504 PRFGRDFSAVGGSDNHPRGPPAAPPPAG---TFPFNRIGSDGVMGAAQLRNLPPPMSMMERVVGREAGVGXXXXXXXXXXXXXXXXXXXXXXXXXSASGRTWRSGSVASEDGGGSISASHLGDSEDCGSVS 631
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig724.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KG36_9PHAE1.540e-1446.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..369
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..436

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig724contigP-littoralis_Contig724:67423..68802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig724.6.1mRNA_P-littoralis_Contig724.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig724 67423..68804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig724.6.1 ID=prot_P-littoralis_Contig724.6.1|Name=mRNA_P-littoralis_Contig724.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=436bp
GTGSGRGGVSNKTKVATSKSGCSKKDAPPSAGRKSPSVLKRPEGSKVLAA
GNHAKNKSAASGVVAPPMLQAHGSVSAAAPTSSPRNEARRPATGHRLESS
ETLGGVMDQADTPVLKRLEASLALIVASSNSKKPGMNSAASRVNTSSSSS
AAPRLPERPGGDGPPTLERPGSGSVPPNKVARVSSDPGRQPLSFGGGGVP
DSRKNAGATKRPGAPIFARDGKVGGGRGGRAGPGAAAAGRGAVTAGSPRG
RGEQAGWPGNHVAQRHTSPLPHPRYGRDLSPGGQGYPGKPTPHPAGAAAS
FPYNGVGSDGGARLAELRGLPPPSSTTEREAGRDGGQQQQHDAIADYGAL
SAASGRTWRSSSIASDDGGGSMSASVVGDSEDCGSVAGSVAGSLAGDTDG
EGGGGGGGGSSVGRGRGRSRGGRRSRGGGRGGGRGS
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