prot_P-littoralis_Contig724.5.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig724.5.3
Unique Nameprot_P-littoralis_Contig724.5.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length685
Homology
BLAST of mRNA_P-littoralis_Contig724.5.3 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 1.750e-94
Identity = 165/208 (79.33%), Postives = 183/208 (87.98%), Query Frame = 0
Query:  246 VNRKTPGTPGRRPKKTKAAKEASPA--EAAVTEVGVELTSPPAVNPFPNWAEDSDEIVGSRVRVYWDGDNEWYSGRIVRYKSSQLKPYLVRYDEDGSVEWMNLPKEVAIVARQLVWVKMRSHPWWPAQVYQPTGKKAMDEGMIEVKERHAYVVFFKTDESGFVPVGQNVIQSFGSRQDLLNPTKRPGKGLEKAIILAKAERKSMAEAS 451
            V RKTPG PGR+PKK KA K    A  EAAV E G +L+SPPAV+PFPNWAEDS E+VGSRVRVYWDGDNEWYSGRIVR+KS+Q +PYLVRYDEDGSVEW+NLP++ AIVARQ+VWVKMRSHPWWPAQVYQPTG KAM +GMIEVKERHA+VVFFKTDESGFVPVGQNVIQSF SRQDL NP K+P KGLEKAII AK+E  +MAEA+
Sbjct:  215 VKRKTPGKPGRKPKKGKADKGEGLASVEAAVPEAGGDLSSPPAVSPFPNWAEDSYEMVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVRYDEDGSVEWLNLPEQPAIVARQVVWVKMRSHPWWPAQVYQPTGPKAMQDGMIEVKERHAFVVFFKTDESGFVPVGQNVIQSFASRQDLANPAKKPSKGLEKAIIAAKSEIGNMAEAA 422          
BLAST of mRNA_P-littoralis_Contig724.5.3 vs. uniprot
Match: A0A6H5KE90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE90_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.280e-42
Identity = 154/360 (42.78%), Postives = 184/360 (51.11%), Query Frame = 0
Query:    5 DSGSSKGSSGSGKKRPASPAARDTPARKGWSTSVAERLRAPSGSSGNSGSGGFQG------------------NRTGRDEVEAATAMHALATSISSXXXXXXXXXXXXXXXXXXXXXVQNKASARSGPPVRRGSEDVGSGL-LSGNLLLSPAERAKLRKGNPGSSLLGRGXXXXXXXXXXXXSLVSKRGAGAKGKDGPHNTARAIGDNKHQQXXXXXXXXXXXXXXXXKWKREDDREGKEASDCYAERGGGMKPGAMPGEVNRKTPGTPGRRPKKTKAAKEASP-----------AEAAVTEVGVELTSPPAVNPFPNWAEDSDEIVGSRVRVYWDGDNEWYSGRIVRYKSSQLKPYLVR 334
            DSG  K ++G G K     +A+D  +  GWSTSVAERLRA +G       GG                     ++TG DE EAA AMHALA S SS                      ++    + G   R+ +     G+ ++   +LSPAE AK+RKGN G +LL  G               SKRG       G H TAR  G      XXXXXXXXXXXXXXX     ED  E +E SD                   RKTPG PGR+PKK K ++   P            EAAV E G +L+SPPAV+PFPNWAEDS E+VGSRVRVYWDGDNEWYSGRIVR+KS+Q +PYLVR
Sbjct:    9 DSGPRKNTAGPGNKL----SAQDALSHTGWSTSVAERLRAQTG-------GGXXXXXXXXXXXXXXXXXXXXXSQTGSDEAEAAAAMHALANSSSS---------------------TKDGGGGKKGVSDRKTAHLGSLGVFVTDERMLSPAEAAKIRKGNLGRALLSGGGDG---------ETASKRGTNG----GVHATARPAGGKXXXXXXXXXXXXXXXXXXXD----EDGHEEEEESDAEP--------------AKRKTPGKPGRKPKKGKHSRSPLPEQAEKGEGLASVEAAVPEAGGDLSSPPAVSPFPNWAEDSYEMVGSRVRVYWDGDNEWYSGRIVRFKSTQREPYLVR 305          
BLAST of mRNA_P-littoralis_Contig724.5.3 vs. uniprot
Match: A0A8J2SGG0_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGG0_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 9.720e-5
Identity = 33/99 (33.33%), Postives = 45/99 (45.45%), Query Frame = 0
Query:  301 VGSRVRVYWDGDNEWYSGRIVRYKSSQLKPYLVRYD-EDGSVEWMNLPK--------EVAIVARQ-------------------LVWVKMRSHPWWPAQ 371
            VG  V VYW+G+ EW+ GR+ RY+ +  K    R D EDG  EW+ L +        +V +   Q                   LVW K   +PWWPA+
Sbjct:  867 VGKVVEVYWEGEGEWFRGRLTRYRDADGKH---RCDYEDGESEWLTLSENSVRFPDGDVVLSPTQQPRKVCEPINGFSCQKLGVLVWAKTGKYPWWPAE 962          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig724.5.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHU3_ECTSI1.750e-9479.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KE90_9PHAE1.280e-4242.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SGG0_9STRA9.720e-533.33Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000313PWWP domainPFAMPF00855PWWPcoord: 356..440
e-value: 6.5E-10
score: 39.4
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 354..417
score: 12.229253
NoneNo IPR availableGENE3D2.30.30.140coord: 350..453
e-value: 1.2E-12
score: 50.0
NoneNo IPR availableGENE3D2.30.30.140coord: 294..349
e-value: 1.0E-8
score: 36.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..631
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..487
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 352..471
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 299..339
IPR002999Tudor domainCDDcd04508TUDORcoord: 302..346
e-value: 0.00116621
score: 35.2664

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig724contigP-littoralis_Contig724:62826..67155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig724.5.3mRNA_P-littoralis_Contig724.5.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig724 62826..67156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig724.5.3 ID=prot_P-littoralis_Contig724.5.3|Name=mRNA_P-littoralis_Contig724.5.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=685bp
VPDRDSGSSKGSSGSGKKRPASPAARDTPARKGWSTSVAERLRAPSGSSG
NSGSGGFQGNRTGRDEVEAATAMHALATSISSSPPPKKTNENGRGGGGGG
GGGVQNKASARSGPPVRRGSEDVGSGLLSGNLLLSPAERAKLRKGNPGSS
LLGRGGGGGGGGGDASSSLVSKRGAGAKGKDGPHNTARAIGDNKHQQQKG
GGEGGGDGYGGGGKWKREDDREGKEASDCYAERGGGMKPGAMPGEVNRKT
PGTPGRRPKKTKAAKEASPAEAAVTEVGVELTSPPAVNPFPNWAEDSDEI
VGSRVRVYWDGDNEWYSGRIVRYKSSQLKPYLVRYDEDGSVEWMNLPKEV
AIVARQLVWVKMRSHPWWPAQVYQPTGKKAMDEGMIEVKERHAYVVFFKT
DESGFVPVGQNVIQSFGSRQDLLNPTKRPGKGLEKAIILAKAERKSMAEA
SNPVSIESYAKEDLEKPREPTQPPSKKAKHNNDGSSNRVKKGDGATSQKP
RKGNGAAAVAAAVAATVAAVAKSIKPAAGDGAGVRPKKEVASSKQPSGAS
AKQPYGASFRQPSGASSKQPPRANSKQHSMASSKQHSVASSKQHFVASSK
QHSVASPKQHSVASSKQHSVTRLNQHSGAISKPLANAAASARVGGSDPVP
VSDATGKPSVALNPATGRQDRRPSSVAAREGDKKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000313PWWP_dom
IPR002999Tudor