prot_P-littoralis_Contig723.5.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig723.5.1
Unique Nameprot_P-littoralis_Contig723.5.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length72
Homology
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BLAST of mRNA_P-littoralis_Contig723.5.1 vs. uniprot
Match: D8LR92_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR92_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 4.920e-8
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:   15 QQQIVNSTTGFRQLHELWLDQNYLTTLPAELFEKLRSLDLLDLRLNPDLQCIP 67
            Q Q  NST G   L ++W++ N L+TLPA LF+ L  L  LDLRLNPDLQC+P
Sbjct:  507 QPQDTNST-GPGHLQDIWMNMNLLSTLPAGLFDGLDMLTSLDLRLNPDLQCVP 558
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig723.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR92_ECTSI4.920e-856.60Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 26..68
e-value: 9.0E-7
score: 28.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 27..48
score: 7.041994
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 2..72
e-value: 3.6E-9
score: 38.1
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 9..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig723contigP-littoralis_Contig723:95740..95955 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig723.5.1mRNA_P-littoralis_Contig723.5.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig723 95600..95955 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig723.5.1 ID=prot_P-littoralis_Contig723.5.1|Name=mRNA_P-littoralis_Contig723.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp
MNRDALTALPGNLFQQQIVNSTTGFRQLHELWLDQNYLTTLPAELFEKLR
SLDLLDLRLNPDLQCIPNNVVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf