prot_P-littoralis_Contig1182.10.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1182.10.3
Unique Name	prot_P-littoralis_Contig1182.10.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	509

Homology

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BLAST of mRNA_P-littoralis_Contig1182.10.3 vs. uniprot
Match: D7G3J9_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J9_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 8.220e-88
Identity = 206/477 (43.19%), Postives = 267/477 (55.97%), Query Frame = 0

Query:   64 MAAAFVRAGDDASLLCGDPAFSYFLVSGSLSPIAVSTN----PAVVESPLHGNGSSSSSSLHRAPGEEATSIITESDVRQQQQPFTRFKLHSHEAPLPEESGG-HNSSCGNWRLSGPASGSWSDSPFDNNSRGTTGCSVLNNVAEQDERGASGLMD---------------------------NGSDVESTAASRNCFFHAGGWDLGQKGSLVLPGQSLDFYLVLSSFIRGVGEIGRDGDHHEAKYPGAVPTASEGLLDDVETGLRWWRLDAREGACIGRVFGDGFSDAVLERLAILMEREEKAAGAVVRRKGGSVKKVVLLFESGDSVRLGDSRADSMKNGSSLRIRAGQVFGAEEAMSGSPGYTANLMALSQVRFFAIPVVAFLQAIGGVWTEPLYRLRSKARLVHHECNARSGGQPRPSTATGIGGERSTARWNGSGDKSLPTFLPSATRSSPVTLTPVPLFSGLHTRNDLEKR 508
            M+  F   GDDAS  C DP+FSYFLVSGSL+P+ +  N      +  +PLH  G+S S  L      E T+  +E+ +RQ +   +         P    +GG H+ +    ++ G A  S       + SR T G S  + VA + + G +                               N SDV+ ++              G++   +LPGQSLD YL+L      V  +  + D  +      VP A E       TG   W+L+AR+G+CIGRVFG GFS A LE++A+LMER E+ A AVVRRKG +V KV LL ESG++VRLGD R ++++N SSLRIRAGQ+FGAEEA+SG P YT NL A   ++FFAIP  AFL+AI GVWTEPLYRLRS+AR+V H C A S GQ RP TA GIGGERS  R N S + +LP    S TR  PV LTPVPLFSG+   + LE+R
Sbjct:    1 MSVTFAHEGDDASWACTDPSFSYFLVSGSLAPMEIIPNRLSATLLTPTPLHYVGTSDS--LKHTLSVELTA--SEAQLRQDRGEHSARLEAQESKPEKGTAGGVHHPAVYGVQIPGTARSSG------DKSRSTAG-STWSPVAPRKDGGLTSEHXXXXXXXXXXXXXXXXXXXXRATTPSEVNASDVDFSSNE------------GEETLPLLPGQSLDCYLLLHR----VKIVDPESDPDKPVSLEVVPAAVERA-----TGTTRWKLEARQGSCIGRVFGKGFSAAALEQVALLMERREEPAAAVVRRKGSAVDKV-LLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFAIPAEAFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQERPLTAAGIGGERSLPR-NWSSNDALPNLTKSRTRPPPVMLTPVPLFSGIQGGSGLEER 443

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BLAST of mRNA_P-littoralis_Contig1182.10.3 vs. uniprot
Match: A0A6H5JRR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR7_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 6.130e-50
Identity = 96/158 (60.76%), Postives = 115/158 (72.78%), Query Frame = 0

Query:  351 VLLFESGDSVRLGDSRADSMKNGSSLRIRAGQVFGAEEAMSGSPGYTANLMALSQVRFFAIPVVAFLQAIGGVWTEPLYRLRSKARLVHHECNARSGGQPRPSTATGIGGERSTARWNGSGDKSLPTFLPSATRSSPVTLTPVPLFSGLHTRNDLEKR 508
            VLL ESG++VRLGD R ++++N SSLRIRAGQ+FGAEEA+SG P YT NL A   ++FFAIP  AFL+AI GVWTEPLYRLRS+ R+V   C A S GQ RP TA GI GERS  R N S + +LP    S TR  PV LTP+PLFSG+   + LE+R
Sbjct:    5 VLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFAIPAEAFLRAIDGVWTEPLYRLRSRVRVVGDGCRADSAGQARPLTAAGIDGERSLPR-NWSSNDALPNLTKSRTRPPPVMLTPIPLFSGIQGGSGLEER 161

[Close]

BLAST of mRNA_P-littoralis_Contig1182.10.3 vs. uniprot
Match: A0A6H5L8E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E9_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 3.290e-27
Identity = 114/334 (34.13%), Postives = 164/334 (49.10%), Query Frame = 0

Query:   64 MAAAFVRAGDDASLLCGDPAFSYFLVSGSLSPIAVSTN--PAVVESPLHGNGSSSSSSLHRAPGEEATSIITESDVRQQQ-QPFTRFKLHSHEAPLPEESGGHNSSCGNWRLSGPASGSWSDSPFDNNSRGTTGCSVLNNVAEQDERGASGLMDNG--SDVESTA---------ASRNCFFHAGGWDL----GQKGSLVLPGQSLDFYLVLSSFIRGVGEIGRDGDHHEAKYPGAVPTASEGLLDDVETGLRWWRLDAREGACIGRV-----------------------------FGDGFSDAVLERLAILMEREEKAAGAVVRRKGGSVKKV 350
            M+  F   G DA   C DP+FSYFLVSGSL+P+ +  N   A +++P     + +S+SL    G E T+  +E+ +RQ + +   R + H   A      G H+ +    ++ G A      SP D +S  +T  S  + VA + + G +     G  SD+EST          A++    +A   D     G++  L+LPGQSLD YL+L      V  IG + D  +A  P  VP A+E +     TG   W+LDAR+G+CIG+V                             FG GFS A LE++A+LMER ++ A AVVRRKG +V KV
Sbjct:    1 MSVTFAHEGYDACWACNDPSFSYFLVSGSLAPVKIIPNRLSASLQNPTPLRYAGTSNSLKHTLGVELTA--SEAQLRQDRCEHSARLEAHESNAEKGTAGGVHHPAVYGVQIPGTAR-----SPGDKSS--STAGSTWSPVAPRKDGGLTSDHGGGGGSDIESTPGGGIFSVLKATKPSEINASEVDFSTNEGRETPLLLPGQSLDCYLLLHR----VKVIGPERDPDKAVSPEVVPAAAERV-----TGTTRWKLDARQGSCIGKVSRRFLRELEREEAKHETEVKVSFLRQTEVFGKGFSAAALEQVALLMERRKEPAAAVVRRKGSAVDKV 316

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1182.10.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1182.10.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G3J9_ECTSI	8.220e-88	43.19	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5JRR7_9PHAE	6.130e-50	60.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L8E9_9PHAE	3.290e-27	34.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 312..437 e-value: 4.4E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 447..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..483
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..124
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 316..421 e-value: 5.79652E-7 score: 46.165
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 315..421

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1182	contig	P-littoralis_Contig1182:28201..34701 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1182.10.3	mRNA_P-littoralis_Contig1182.10.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1182 28201..37358 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1182.10.3 ID=prot_P-littoralis_Contig1182.10.3|Name=mRNA_P-littoralis_Contig1182.10.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=509bp
MLQSTKGRCHVPCTALEKRVASVCSRRAELRAAHEVSWLASHLRRIPALE
NIAAWKLESLGRNMAAAFVRAGDDASLLCGDPAFSYFLVSGSLSPIAVST
NPAVVESPLHGNGSSSSSSLHRAPGEEATSIITESDVRQQQQPFTRFKLH
SHEAPLPEESGGHNSSCGNWRLSGPASGSWSDSPFDNNSRGTTGCSVLNN
VAEQDERGASGLMDNGSDVESTAASRNCFFHAGGWDLGQKGSLVLPGQSL
DFYLVLSSFIRGVGEIGRDGDHHEAKYPGAVPTASEGLLDDVETGLRWWR
LDAREGACIGRVFGDGFSDAVLERLAILMEREEKAAGAVVRRKGGSVKKV
VLLFESGDSVRLGDSRADSMKNGSSLRIRAGQVFGAEEAMSGSPGYTANL
MALSQVRFFAIPVVAFLQAIGGVWTEPLYRLRSKARLVHHECNARSGGQP
RPSTATGIGGERSTARWNGSGDKSLPTFLPSATRSSPVTLTPVPLFSGLH
TRNDLEKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like