mRNA_P-littoralis_Contig721.3.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5KL66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL66_9PHAE) HSP 1 Score: 815 bits (2106), Expect = 1.080e-262 Identity = 479/928 (51.62%), Postives = 603/928 (64.98%), Query Frame = 2
Query: 3716 VTYEAMWWLVIERYTKAQQEEAAQGAVGTG--AGPEEGSSSSPDVPSAAPGSGTAASPTGVRDDDNKVIVEADVVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVDAFLYPQYKDRDVQRVIITARTSAVRKAKAVLEKSFAFNPEGAAKLRSLSGAMTTARQAEAMLNAHELASQKFDKVLRFEALGDKQGGTKPTTSKIAFFQPESKTTRTTKTPRSTSAARKDFKDMSLVAKEF*EAIKRTM-DPNLTSKERETVMSQIGIVLPQALAHAEDGGGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHRAPGQVHCGSWRISITTAIRC-----CRIWRTTDEKTGRGSRTNIRSLCVTTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRLVP-----GNRDKVASHLLAHIFNRRRGSFLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIGPLPVLLRRKGEDEPVKELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRA 6460
VTYEAMWW VIE+Y A++EEAA A+ T A P G+S+ APG+G A GV V VE DVVPWL+++A+ HKTL+LW FLL+DYP YL FRTGGRTANYKLCVA FRK+AP+FAATGKNRYQQLAS HLLNLARMTD DLEA+ LFSSQYN+KN++NFNNVFLD+FMEM N+TVKQNLGRITQA+M++LP IC+SRRAAVDEVD LYP Y +RDV+R II R A+RKAKAVLEKSFAF+ EG +LRSLSGA+TT R+ EAMLNA+++A +FDKVL EALGDK+ G KP+TSKI FF E+ T + TK P ST AR+D KDM +AKEF I+ M + N+ ++E ++S IG+VLP AL+HA+DGG + +NKA GV WA +T+C DA+Q G Y+ DGFA D AT++HR+P V C I+ R + +TDE+ G G R C PK + +R K + T++ + +P+ + P G RDK+AS+L I + G A+ ++ GV+P+ + + AT G GP+P SA G G G T DG GDG +A PL + ++G GPGIGEGELSTT+AI+ H+ YT V SW++TS D+DQI+HILLA A G+I PTG D+V VTVR+RKG G QFVDVNRVYTAL++ P W+ GA G+G G P WL +H GQAKVVLFVVMYFLGGCDFLP F LK+ MF YV+E IS PGLF PIVVK +GKWT+DV +CVKMLGVCYF+MH +FQ Y GA +++Q ++G+ K F+E+VR+ IF + +KNCPDW A+ FQV+RA
Sbjct: 189 VTYEAMWWAVIEKYIVAKKEEAASPAMTTADSATPSNGASAG----EGAPGAGGRA--RGV-----PVNVEEDVVPWLREEAKEHKTLRLWATFLLDDYPRYLMFRTGGRTANYKLCVAGFRKIAPLFAATGKNRYQQLASWHLLNLARMTDNDLEAVSCLFSSQYNTKNYRNFNNVFLDEFMEMENRTVKQNLGRITQAYMVKLPRICDSRRAAVDEVDTRLYPSYSERDVRRGIIKLRAGAIRKAKAVLEKSFAFSVEGKEQLRSLSGAVTTDRKGEAMLNANKIAEVRFDKVLLGEALGDKENGAKPSTSKIPFFPAENNTHKATKAPTSTIVARRDLKDMDAMAKEFWGVIQAAMMEENVNTEEWNRIVSSIGVVLPMALSHADDGGTYGVNKAAGVKWAFDTYCPDAIQGGPFYN--CDGFAYDWATEIHRSPSVVTCDQGAIAYLDHYRDQILSDVATYGSTDEE-GGGHRV---VACCYDDPKEVPPIKAATQR--KRLVGIETTNVDFDVTSSRPIPTGAKYSPFLRRAGTRDKIASYLWQRITSHPGGREKADGASFVAFGVSPVPVPPVEGXXXXXXXXSAAATFSG----GPAP---SAPSGQGPSGMT-EEDG-------GDGSSAAN---AKPLDARVWKEGASAVTSVEGPGIGEGELSTTYAIVHHALYTGLDKVTSWLITSTDSDQIMHILLAFASGKITPTGSDKVRVTVRQRKGQGAIQFVDVNRVYTALVDKPAWNTGA--------GEG-------------GVAPEWLNDHEGQAKVVLFVVMYFLGGCDFLPGFFNLKMPAMFKYVLEAISQPGLFNKPIVVKVDGKWTIDVGECVKMLGVCYFQMHLRVFQGTYNGGASELFQAVDGDKKKFIEKVRMIIFKSQKKNGRKNCPDWYALQFQVERA 1058
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: D7FTC0_ECTSI (Similar to solute carrier family 35, member F4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC0_ECTSI) HSP 1 Score: 797 bits (2059), Expect = 2.920e-251 Identity = 459/948 (48.42%), Postives = 587/948 (61.92%), Query Frame = 2
Query: 3593 VARHKGLDD--AVLWGRYRRSREITRGRRQARRCRQQVQAEPPVTYEAMWWLVIERYTKAQQEEAAQGAVGTGAGPEEGSSSSPDVPSAAPGSGTAASPTGVRDDDNKVIVEADVVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVDAFLYPQYKDRDVQRVIITARTSAVRKAKAVLEKSFAFNPEGAAKLRSLSGAMTTARQAEAMLNAHELASQKFDKVLRFEALGDKQGGTKPTTSKIAFFQPESKTTRTTKTPRSTSAARKDFKDMSLVAKEF*EAIKRT-MDPNLTSKERETVMSQIGIVLPQALAHAEDGGGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHRAPGQVHCGSWRISITTAIRCCRIWRTTDEKTGRGSRTNIRSLCV-------TTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRL-----VPGNRDKVASHLLAHIFNRRRGSFLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIG--PLPVLLRRKGEDEPVKELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISI 6385
VA+ G DD A +YRRS + VTYEA+WW+VIE+Y A+Q+EA +G PG+ A P V ++ DVVPWLK+QA+ HKTL+ W FLL+DYPTYL FRTGGRT NYKLCVA FR +AP+FAATGKNRYQQLA H+L LARMTD+DLEA+ TLFSSQ+N+KN++NFNNVFL + EM+N+ VKQNLGRITQA+M RLP IC+SRR AVDEVDA YP YK+RDV+R +I R +RKAK VL +SFAF+ EG +LRSL GA+TTAR+AEAMLNA+++A +KFD VL++EALGDK GGTKP+TSKI FF PE+ T + + P ST+ ARKDF+DM+L+A EF + IK M+ LT +ER +M IG+VLP AL+ + DGG +TINKA G NWA +TFC DA+Q V Y FDGFA D ATDLHR+P C ++ R T+ GR R V T +P ++ ++R G + SS + +P+ ++ VPGNRD +ASHL + + G +A ++ GV + + + EG+ G+G+ S+ G + + + PA PL + +KG+ P G GIGEGELSTTHAII H+ YT VR W+VTSVDTDQI+HILLAMADGRIKPTGDD+ VTVRR KG V QFVD+NRVYTALI+ P W+ GA G+G+E P WL E G+A+VVLF+VM+ L GCDFLP F+FLKL KMF +V++TIS PGLF+ PIV K NGKWT+D+DQCVKMLGVCYF+MHW IFQVAY GAV+++Q ++G+ + F++R R +
Sbjct: 415 VAKALGGDDVHAAAGSKYRRSNHLL-----------------TVTYEALWWVVIEQYVAAKQKEAREGP---------------------PGAAPPAQP---------VDIQGDVVPWLKEQAKEHKTLRFWATFLLDDYPTYLMFRTGGRTTNYKLCVAVFRNIAPLFAATGKNRYQQLALWHMLTLARMTDSDLEAVATLFSSQFNTKNYRNFNNVFLGEIQEMMNRVVKQNLGRITQAYMTRLPLICDSRRGAVDEVDASFYPSYKERDVRRAVIRVRVGPIRKAKEVLAESFAFSGEGKDQLRSLGGAVTTARKAEAMLNANDIAERKFDAVLKYEALGDKVGGTKPSTSKIPFFAPENTTLKASTAPTSTAVARKDFRDMTLLATEFWKVIKSAVMEGELTEEERNEIMGSIGVVLPMALSRSGDGGAYTINKAAGANWAFDTFCPDAIQEEVFYS--FDGFAYDWATDLHRSPPVGKCQKGAVAYLDHYRDQIFSDLTNY--GRVDDDGQRQYVVAFGYDDPTEVPP-IKAGTQHKRREGVAA-----SSVVFDTSSIKPIPTGDKYQPFIRVPGNRDSIASHLWQRMISHPEGIGGAVDATFVAFGVARI----------------VVPSIEGA-----------------GDGSDVSASGVDPALSPSNTPGGEGSPATKKKPLDAHVWKKGDSSPTAHEGQGIGEGELSTTHAIIHHALYTGLGRVRWWLVTSVDTDQIIHILLAMADGRIKPTGDDRTRVTVRRHKGQQVNQFVDMNRVYTALISKPAWNTGA--------GEGREP-------------PEWLNEGEGEARVVLFLVMFLLSGCDFLPGFYFLKLPKMFQFVLDTISQPGLFSKPIVKKVNGKWTLDIDQCVKMLGVCYFQMHWNIFQVAYGRGAVELFQAVDGDSRTFIDRNRADL 1251
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5LAS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAS0_9PHAE) HSP 1 Score: 597 bits (1539), Expect = 1.060e-171 Identity = 396/1031 (38.41%), Postives = 506/1031 (49.08%), Query Frame = 2
Query: 3842 VPSAAPGSGTAASPTGVRDDDNKVIVEADVVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVDAFLYPQYKDRDV-------QRVIITARTSAVRKAKAVLEKSFAFNPEGAAKLRSLSGAMTTARQAEAMLNAHELASQKFDKVL--------------------------------------------------------------RF------EALGDKQGGTKPTTSKIAFFQPESKTTRTTKTPRSTSAARKDFKDMSLVAKEF*EAIKRTM-DPNLTSKERETVMSQIGIVLPQALAHAEDGGGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHRAPGQVHCGSWRISITTAIRC-----CRIWRTTDEKTGRGSRTNIRSLCVTTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRLVP-----GNRDKVASHLLAHIFNRRRGSFLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIGPLPVLLRRKGEDEPVKELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPW-LEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGWVARSGNDTEELTRTNCCIKLSPHALLDHQNLVKLHTCGCKGGRKSP 6673
PS +G A G R V VE DVVPWL+++A+ HKTL+LW FLL+DYP YL FRTGGRTANYK+CVA FRK+AP+FAATGKNRYQQLAS HLLNLARMTD DLEA+ LFSSQYN+KN++NFNNVFLD+FMEM N+TVKQNLGRITQA+M++LP IC+SRRAAVDEVD LYP Y + R + A+RKAKAVLEKSFAF+ EG +LRSLSGA+TT R+ EAMLNA+++A +FDKVL RF EALGDK+ G KP+TSKI FF E+ T + TK P ST AR+D KDM +AKEF I+ M + N+ ++E ++S IG+VLP AL+HA+DGG + +NKA GV WA +T+C DA++ Y FDGFA D AT++HR+P V C I+ R + +TDE+ G G R C PK + +R K + T++ + +P+ + P G RDK+AS+L I + G A+ ++ GV+P+ P+P P+ G L++H GQAK+VLFVVMYFLGGCDFLP F LK+ MF YV+E IS PGLF PIVVK +GKWT+DV +CVKMLGVCYF+MH +FQ Y GA +++Q ++G+ K F+E+VR+ IF + +KNCPDW A+ FQV+RA VL YWQ AF P++F+ GWVA N ELT NCCIKLS +ALL+ VK+ TC ++SP
Sbjct: 1532 TPSNGASAGEGAPGAGGRARGVPVNVEEDVVPWLREEAKEHKTLRLWATFLLDDYPRYLMFRTGGRTANYKVCVAGFRKIAPLFAATGKNRYQQLASWHLLNLARMTDNDLEAVSCLFSSQYNTKNYRNFNNVFLDEFMEMENRTVKQNLGRITQAYMVKLPRICDSRRAAVDEVDTRLYPSYSEXYAILAVPPWTRSTLACTRRAIRKAKAVLEKSFAFSVEGKEQLRSLSGAVTTDRKGEAMLNANKIAEVRFDKVLLGEALGDKENGAKPSTSKIPFFPAENNTHKATKAPTSTIVXGAVSTDRKGEAMLNANKIAEVRFDKVLLGEALGDKENGAKPSTSKIPFFPAENNTHKATKAPTSTIVARRDLKDMDAMAKEFWGVIQAAMMEENVNTEEWNRIVSSIGVVLPMALSHADDGGTYGVNKAAGVKWAFDTYCPDAIRGEPFYF--FDGFAKDWATEIHRSPSVVTCDQGAIAYLDHYRDQILSDVATYGSTDEE-GGGHRV---VACCYDDPKEVPPIKAATQR--KRLVGIETTNVDFDVTSSRPIPTGAKYSPFLRRAGTRDKIASYLWQRITSHPGGREKADGASFVAFGVSPV-----------------------------------------------------------------------PVP-----------------------------------------------------------------------------------------------------------------------------------PVEGXXXXXXLDDHEGQAKMVLFVVMYFLGGCDFLPGFFNLKMPAMFKYVLEAISQPGLFNKPIVVKVDGKWTIDVGECVKMLGVCYFQMHLRVFQGTYNGGASELFQAVDGDKKKFIEKVRMIIFKSQKNNGRKNCPDWYALQFQVERAERVLLYWQTAFDSKTTPVAFEGHGWVAEGKNPGGELTSANCCIKLSAYALLNLDGKVKMLTCNAGVMQRSP 2352
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5JLD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD9_9PHAE) HSP 1 Score: 278 bits (710), Expect = 1.640e-78 Identity = 129/245 (52.65%), Postives = 166/245 (67.76%), Query Frame = 2
Query: 6041 LEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGWVARSGNDTEELTRTNCCIKLSPHALLDHQNLVKLHTCGCKGG-RKSPLCNTKKCPCFKLGKACVRGYCKCNAACVQNRED 6772
+E+ +G V LFVVM+ LGGCDFLP F+FLK+ KMF +V++TIS PGLF+ PIV K NGKWT+D+DQCVKMLG+CYF+MHW I QVAY GAV+++Q ++ + + F++RVR+ IF A GP KK PDW A+ Q RA VLRYW A I +Q GW A + +LT NCC++LSP+ALL+ + VK+ TCGC G K+PLCN C C K G CV +C CN C +NR D
Sbjct: 1 MEDGSG---VALFVVMFLLGGCDFLPGFYFLKMPKMFQFVLDTISQPGLFSRPIVKKVNGKWTLDIDQCVKMLGMCYFQMHWNILQVAYGRGAVELFQAVDWDSRTFIDRVRLIIFKANGPNAKKKRPDWTALRLQAMRAERVLRYWGSALDSKTEEIEYQGHGWAAGANKPEAKLTFGNCCVQLSPYALLNQEGKVKMLTCGCTGRVSKTPLCNNNSCGCHKRGSKCVPMHCGCNGKCYKNRAD 242
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 263 bits (671), Expect = 1.470e-66 Identity = 255/959 (26.59%), Postives = 405/959 (42.23%), Query Frame = 2
Query: 3929 VVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVDA-FLYPQYKDRDVQRVIITARTSAVRKAKAVLEKSFAFNP-EGAAKLRSLSGAMTTARQAEAMLNAHELASQKFDK-VLRFEALGDKQGGTK---PTTSKIAFFQPESKTTRTTKTPRSTSAARKDFKDMSLVAKEF*EAIKRTMDPN------LTSKERETVMSQIGIVLPQALAHAEDGGGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHRA--PGQVHCGSWRISITTAIRCCRIWRTTDEKTGRGSRTNIRSLC------VTTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRLVPGNRDKVASHLLAHIF-NRRRGSFLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIGPLPVLLRRKGEDEPV---KELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKE-NGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGWVAR---SGNDTEELTRTNCCIKLSPHALLDHQNLVKLHTCGCKGGRKSPLCNTKKCPCFKLGKAC 6721
VV W+ + E+HKT +W FLL DYP Y+AFRT RT N++L + R++APIF TGK++YQ L HL ++R + D+ + LFS F + LD+ E+ N+ K RI + + +L I R A+ + ++ F+ +RD R + R AVR A L +S F +G K+ +L G + +++ ++++ A K + VL + K GTK T K+ + + TK+ +SA + + +E+ +D +T + +++ +G P ++A+A G H NKA G + CAD YD D D+ +H+ P + G+ I + W + E + +C V I Q R + P ++ P Q P RD +A++L + + N V GV D V AE L MGG GAT + G E P+L R G D + ++ GP IGE ELS H I+W Y + W+V+SVDTD + ILLAM G ++P G+ V+VTV++ GG T+F+ +NRV+ ++ + G+++ + T G W+ KV LFV+ + GCD+LPA L +KM+ ++++ T GLF P+ +E +G W V V++C K+L +F F A+ L Q+ + ++G+ + +V+ +R +I KT CP + ++ Q +R + RYWQ F GW G+D +ELT+ NC + LS +A + CGC + LCN +C K AC
Sbjct: 1028 VVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLVVDHLTEVSRYSRNDMRVVSELFSVSLGPDT---FARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDGRVFPPVKSQEIIDSPANARAKLRECVLYYVFKKKKLNGTKLKGATKKKVFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAAREGGGVVTQDQMLEMVASVGAATPYSMANATGGAKHA-NKAAGPGKWVREHCADGFADDPFYDA--DAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTE---------LLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDP---KSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLE--------------------MGGVGATEALSGTE--------------------PLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKN-FHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGE-TKFLWMNRVFASIC---ELQDGSESAWPPLTFRG------------------WIP--TDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAH-LTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPD--TALCNRCRCKNKKCSLAC 1900
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 219 bits (557), Expect = 5.430e-54 Identity = 242/957 (25.29%), Postives = 374/957 (39.08%), Query Frame = 2
Query: 3929 VVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVDA-FLYPQYKDRDVQRVIITARTSAVRKAKAVLEKSFAFNP-EGAAKLRSLSGAMTTARQAEAMLNAHELASQKFDKVLRFEALGDKQGGTKPTTSKIAFFQPESKTTRTTKTPRSTSAARKDFKDMSLVAKEF*EAIKRTMDPNLTSKERETVMSQIGIVLPQALAHAEDG--------GGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHRA--PGQVHCGSWRISITTAIRCCRIWRTTDEKTGRGSRTNIRSLC------VTTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRLVPGNRDKVASHLLAHIF-NRRRGSFLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIGPLPVLLRRKGEDEPV---KELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKE-NGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGWVAR---SGNDTEELTRTNCCIKLSPHALLDHQNLVKLHTCGCKGGRKSPLCNTKKCPCFKLGKAC 6721
VV W+ + E+HKT +W FLL DYP Y+AFRT RT N++L + R++APIF TGK++YQ L ++R + D+ + LFS F + LD+ E+ N+ K RI + + +L I R A+ + ++ F+ +RD R + R AVR A L +S F +G K+ +L G R + +M A+E + T + +++ IG P ++A+A G G NKA G + CAD YD D D+ +H+ P + G+ I + W + E + +C V I Q R + P ++ P Q P RD +A++L + + N V GV D V AE L MGG GAT + G E P+L R G D + ++ GP IGE ELS H I+W Y + W+V+SVDTD + ILLAM G ++P G+ V+VTV++ GG T+F+ +NRV+ ++ + G+++ + T G W+ KV LFV+ + GCD+LPA L +KM+ ++++ T GLF P+ +E +G W V V++C K+L +F F A+ L Q+ + ++G+ + +V+ +R +I KT CP + ++ Q +R + RYWQ F GW G+D +ELT+ NC + LS +A + CGC + LCN +C K AC
Sbjct: 29 VVRWIVARTESHKTFAVWKQFLLHDYPAYIAFRTALRTGNFRLRLEGLRRIAPIFFITGKDKYQFLV------VSRYSRNDMRVVSELFSVSLGPDT---FARIGLDERQEVSNRLYKTLTKRILSSTIEKLAPIAQLREVAIFDFESHFIEKPRTERDRCRELAVKRAPAVRAAMDCLRESPVFEGNDGKDKVVALDG-----RVFPPVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMFDAAREGGGVV--------TQDQMLEMVASIGAATPYSIANATGGEEESVRNTGAKHANKAAGPGKWVREHCADGFADDPFYDA--DAHGVDLPVSIHQGVHPEYLEKGTAGIIDYFKRQLLSKWLQSTE---------LLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDP---KSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLE--------------------MGGVGATEALSGTE--------------------PLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKN-FHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGE-TKFLWMNRVFASIC---ELQDGSESAWPPLTFRG------------------WIP--TDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAH-LTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPD--TALCNRCRCKNKKCSLAC 881
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5K5E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E1_9PHAE) HSP 1 Score: 197 bits (501), Expect = 7.210e-47 Identity = 232/880 (26.36%), Postives = 369/880 (41.93%), Query Frame = 2
Query: 3929 VVPWLKKQAENHKTLQLWVAFLLEDYPTYLAFRTGGRTANYKLCVAAFRKLAPIFAATGKNRYQQLAS*HLLNLARMTDADLEAIGTLFSSQYNSKNWKNFNNVFLDDFMEMVNKTVKQNLGRITQAFMLRLPAICNSRRAAVDEVD---AFLYPQYKDRDVQRVIITARTSAVRKAKAVLEKSFAFNPE-GAAKLRSLSGAMTTARQAEAMLNAHELASQKFDKVLRFEALGDK--QGGTKPTTSKIAFFQPESKTTRT----TKTPRSTSAARKDFKDMSLVAKEF*EAIKRTMDPNLTSKERETVMSQIGIVLPQALAHAEDGGGHTINKAQGVNWAIETFCADAVQPGVIYDGGFDGFACDMATDLHR----------APGQVHC------GSWRISITTAIRCCRIWRTTDEKTGRGSRTNIRSLCVTTIPKTYQSSRPPRKRSGKSV*APPTSSASTPRDPYQAVPSTNRLVPGNRDKVASHLLAHIFNRRRGS---------FLFGNANVMSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGEGATPSSDGREEVFATGDGVTARAQPAIGPLPVLLRRKGEDEPV-KELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKML-GVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQR 6457
VV W+KK+A HKT LW FLL +P Y+ FRT RT ++ L + A R++APIF +GK+RYQ L HL ++RM+++DL+ + FS + LD+ E+ N+ RI +F+ +L R +DE + FL +RD R + R AV KA L S F G K+ +L + + + +L A A K + + DK G TK I E+++TR+ +K + A ++M V + I+ +L+ ++ + ++IG P ++A+A G H NK++G ++ +DAV Y + D+ +H+ A G ++ WR+ + C N R+ V I Q R K G ++ PTS+ + P YQ+ N+ R +A+HL I + +R + +G S+ + D G +P P T VG V ++ GG G EE GV A+ P+L R+G V +E GP IGE ELS H I+W Y R + +W+VTSVDTDQ + ILLAM+ G +K +G+ V VTV++ GG +++ VNRV+ A I+G + DG E W +G F GG +P +++ T G+F T I V+E G W + +D+C+K+L + YF+ + + G V + + G+ +V+ +R+ I + CP +++M Q +R
Sbjct: 269 VVAWIKKRAAEHKTFALWEHFLLHVFPAYMTFRTAMRTGDFMLRLDALRRIAPIFYISGKDRYQFLVVDHLAEMSRMSESDLKVMSDFFSVSLSKDACARLG---LDERQEVANRLYTTLTNRIFPSFIHKLAPTAQLRE--IDEFEFGREFLEGPRTERDSCRELALLRAPAVMKATQCLRDSPLFEGNLGKGKVVALDERVFPEAKWQEILGASATALAKMQDFVLYFVKKDKTKNGATKKKIFSIPALNTENESTRSNGRSSKLRDTVGNAYAGCQEMKAVVLNIWDMIEG--GGSLSEEQVVDMATRIGASTPFSMANATGGAKHA-NKSEGPTKWLQDHSSDAVADEPFYT--VHAYGVDLPVSIHQGVRQRDLEGGAQGVINYFVSELDSRWRMGADLLLVC-----------------NDRASLVPAIKGREQLGRAD-KIGGCALSLDPTSTDAIPPSQYQSWLRDNQKAA--RGGIAAHLAMGILDDKRWTGGCTLNGIVAFYGVGGEASLRTSDAADPAVRDGGGLPGGPATSPEIPAPVGS-----VENSTVRSGGGGT-------EE-----GGVPTLAEE----YPLLHYRRGAGRSVQRERGPNIGEAELSLVHFIVWAKKYWGRN-IENWLVTSVDTDQRMIILLAMSTGFLKASGEGAVEVTVQKVVGGA-PKYLWVNRVFAA-ISGLR--------------DGNESV--------------WPTTDSG-----------FQGG---IPDDD-----------EKSVRTEGVFRTSIFVREGGVWGIKIDECIKLLVTIFYFKYEAALARGGQEPGWVL--RNVNGDVTHYVDVIRMLILRRGSKRATSTCPAFESMRLQSER 1039
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5JR25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR25_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.370e-37 Identity = 116/402 (28.86%), Postives = 188/402 (46.77%), Query Frame = 2
Query: 5609 GPLPVLLRRKGEDEPV---KELGPGIGEGELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKE-NGKWTVDVDQCVKMLGVCYFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGWVAR---SGNDTEELTRTNCCIKLSPHALL-DHQNLVKLHTCGCKGGRKSPLCNTKKCPCFKLGKACVRGYCKCNAACVQNREDAAAQKA 6790
G P++ R G D ++ GP IGE ELS H I+W Y ++ + W+V+SVDTD + ILL M ++P G+ V+VT+++ GG T+F+ +NRV+ ++ + G ++ + T W KV LFV+ + GCD+LPA L +KM+ ++++ T LF P+ +E +G W + VD+C K++ +F F A+ L Q+ + ++G+ + +V +R +I KT CP + ++ Q +R + +YWQ E F GW G+D +ELT+ NC ++LS +A + + VKL C + LC +C K AC C C R AA +A
Sbjct: 20 GTEPLVHFRNGNDPTPGVERQRGPDIGEAELSVIHFIVWAKKYWGKSFDK-WIVSSVDTDLWMIILLPMTTDGLRPRGEGAVDVTIQKVVGGE-TKFLWMNRVFASIC---ELQDGTESAWPLVT------------------FRSWFP--TDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEILFDKPLFFEEPDGTWAMHVDECAKLVATMFFYKDEAAFGTAH-LTPAQLVESVDGDVEGYVNVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFQYWQHDLRETMPATEFAGQGWSVDPRGKGSDGDELTKENCVLELSEYAYIAPDRKTVKL---ACGFNPDTALCTRCRCKNKKCSLACG-----CRNRCTLRRAAAAPVRA 387
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 158 bits (399), Expect = 4.010e-36 Identity = 113/365 (30.96%), Postives = 174/365 (47.67%), Query Frame = 2
Query: 5687 ELSTTHAIIWHSNYTSRAAVRSWVVTSVDTDQIVHILLAMADGRIKPTGDDQVNVTVRRRKGGGVTQFVDVNRVYTALINGPKWDQGAKAFFAATTGDGQEEQEAGEPAPISGECPPWLEEHAGQAKVVLFVVMYFLGGCDFLPAFHFLKLNKMFPYVVETISTPGLFTTPIVVKENGKWTVDVDQCVKMLGVC-YFRMHWGIFQVAYPLGAVQMYQELEGNDKVFVERVRISIFLACGPKTKKNCPDWDAMTFQVQRAATVLRYWQEAFAEHPNPISFQKLGW---VARSGNDTEELTRTNCCIKLSPHALLDHQNLVKLHTCGCKGGRKSPLCNTKKCPCFKLGKACVRGYCKCNAACVQNRE 6769
EL H I+W Y + + W+VTSVDTD + ILLAM+ G+I P G D+V+VTV+R GG +F+ VNRVY + + G+++ + A A G P KV LFV++Y L GCDFLPA L KM+ ++++ G+F + V E+G WTV+++Q + +L + YFR VA G + + + + + +V+ +R++I T CP + +M Q R +V YWQ+ F +H F + GW G++ LT N + +S H+ + + TCGC K+ N + C C G+ C C C C R+
Sbjct: 208 ELPVAHFIVWAEKYWGKK-LDKWLVTSVDTDLWIIILLAMSTGKILPYGIDKVDVTVQRIVGGAA-KFLWVNRVYNKIAD---LKDGSESAWPA--------------ADFQGWTP------TADEKVRLFVLIYLLAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAFAGVATTPG--DLLRSVNDSVRNYVDLIRVAIVKLGKKWTTDTCPTYRSMREQCLRMKSVDGYWQDGFKDHMPERDFNRKGWGIDPKAKGSNASALTGENSVMWMSEHSYIGPDGKMVTMTCGCDPV-KAFKHNCRGCGC--KGRKCSLA-CGCRGRCHLARQ 541
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Match: A0A6H5K2D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2D4_9PHAE) HSP 1 Score: 160 bits (405), Expect = 6.040e-36 Identity = 100/248 (40.32%), Postives = 127/248 (51.21%), Query Frame = 3
Query: 2979 LLEKDDTLGVSAAWDNNDTDPKKTFGRATHLGQIGASAHQALKGARLGLESSWTKVKDVTLDTLKKGRDAAANDNILKSWKSLLFAMVGNSPHYLR-PGEDESCLEVEIQRKHHAAKCKVKSTNLFLQAGSTKRLADNEAALSRIQRCCHAGVVWIEVDGRWRSV--VKQRVLVEGDEETYRIMVQLKRSNPEKYKWMVPHPGGWHIMLHVTKALMTRYYGAGIEEVAKSLGGDDKHAAAGSKCRRSH 3713
LL D + + DNND DP F A H GA+ H+ + L S L G A P YL PG+ SCLEV ++R AK KS NL++Q GSTK DN AAL R+ C + W V V + VLVEGD+ETY MV+ K++ PE KW++PHPGGWHI+LH +KAL+ YYGAG+E +A+ LG +DKHAA GS RR+H
Sbjct: 327 LLTNDPRKAIMLSLDNNDVDPTARFSTAEHGSANGAAGHEQILPLGPPLLSQ----------ELDGGHGAMG------------------CPMYLNDPGKGRSCLEVRVRRFLAPAKNITKSKNLWIQPGSTKSEEDNFAALDRLGVCGNMKTSWSTDPDTSEEVPTVSRMVLVEGDQETYSFMVKAKQTKPEVCKWLIPHPGGWHILLHASKALLQLYYGAGVEAIARLLGAEDKHAADGSNYRRNH 546 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig721.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig721.3.3 >prot_P-littoralis_Contig721.3.3 ID=prot_P-littoralis_Contig721.3.3|Name=mRNA_P-littoralis_Contig721.3.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=474bp MSIGVTPLDSAGQDDRGNVPAEPTTLATAEGSVGEGPSPGVTSANDGMGGback to top mRNA from alignment at P-littoralis_Contig721:18071..28175+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig721.3.3 ID=mRNA_P-littoralis_Contig721.3.3|Name=mRNA_P-littoralis_Contig721.3.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=10105bp|location=Sequence derived from alignment at P-littoralis_Contig721:18071..28175+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig721:18071..28175+ >mRNA_P-littoralis_Contig721.3.3 ID=mRNA_P-littoralis_Contig721.3.3|Name=mRNA_P-littoralis_Contig721.3.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1422bp|location=Sequence derived from alignment at P-littoralis_Contig721:18071..28175+ (Pylaiella littoralis U1_48)back to top |