mRNA_P-littoralis_Contig720.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A7H0VG76_9FLAO (DoxX family protein n=1 Tax=Croceimicrobium hydrocarbonivorans TaxID=2761580 RepID=A0A7H0VG76_9FLAO) HSP 1 Score: 264 bits (675), Expect = 1.540e-84 Identity = 134/249 (53.82%), Postives = 171/249 (68.67%), Query Frame = 1
Query: 4 ILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLL--------------------------EIPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYHLINAAE 630
+L VLI ++F NR+YI+P+LG G QN+VLSLS GCI LGYYVL HLP +GMKSAEEL L+P KYATIYTL+N+ T ES KV+S+ Y+SE WWQK++W+I D+SETV+L EGYEPP+HDF I++ G ++TDQVL ERIF+L EIPF+G+T SLPS+ EK++AW+ RFSF +D TT KTI+RANPGIV+LE GV++KKWH + A E
Sbjct: 126 VLTVLISLIFFNRQYIKPLLGPGGQNVVLSLSLAGCIALGYYVLEHLPLKDFRPYAEGKSIVEGMKSAEELNLEPPKYATIYTLKNANTEESMKVNSQNYISEGWWQKKEWEIQSDESETVLLSEGYEPPIHDFSIEMNGNDVTDQVLAAERIFVLVAYDLNKSDSSAYAPLNEFALAAADQEIPFIGITGSLPSLAAEKSEAWSLRFSFGIIDGTTAKTIIRANPGIVMLEKGVIVKKWHAQDLPAFE 374
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A2T4WJT4_9BACT (DoxX family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4WJT4_9BACT) HSP 1 Score: 231 bits (589), Expect = 1.420e-71 Identity = 126/242 (52.07%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 4 ILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFL-----LE---------------------IPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHY 609
+L VLI I+F R+ IQP+L I L+LSF C LG+ VLNHLP +GMKSAEELG +PT+YATIYTLEN+ +GES K+ S Y+ E WW+K++W+I D +ET + EGYEPP+HDF+IDL G EITDQVL + IFL +E IPFLGL+ASLPSV+ EK + RFS AS+DET LKTIVRANPGIVLL+ G+++KKWHY
Sbjct: 126 VLTVLIAIIFFQRQLIQPLLKPMGSYITLALSFFLCFWLGHQVLNHLPLKDFRAYAEGKSIIEGMKSAEELGFEPTQYATIYTLENAASGESMKIDSRRYIDEGWWEKKEWQINSDLTETALETEGYEPPIHDFVIDLAGNEITDQVLEADLIFLSIAYRMEKTEDEAYAKLNEFALAAADKGIPFLGLSASLPSVVAEKTEKLGLRFSIASMDETALKTIVRANPGIVLLKKGLIVKKWHY 367
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A353FHC7_9FLAO (DoxX family protein n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A353FHC7_9FLAO) HSP 1 Score: 210 bits (534), Expect = 2.620e-63 Identity = 110/250 (44.00%), Postives = 157/250 (62.80%), Query Frame = 1
Query: 4 ILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLL--------------------------EIPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYHLINAAEK 633
IL VLI I+F N KYI+PVL +G ++ V+ L+ +GC +GYYVLNHLP +GMKSAEELGL+PTKY T+Y ++N + G+ +K++SE Y++E WW+K++W+I D++E+VVL+ GYEPPVHDF+I + T +VL +FL+ + P +GL+ASL S +E+ T F FA++D TTLKTI+R+NPG+V+L+ G V KWHY+ I EK
Sbjct: 126 ILTVLIVIIFTNLKYIRPVLSAGGRSAVMVLALIGCSFMGYYVLNHLPIKDFRAYAEGKSIVEGMKSAEELGLEPTKYGTVYYMKNKENGDEKKITSEQYMAEEWWKKKEWEIQSDKTESVVLKHGYEPPVHDFVILYNDEDATQEVLEAPVVFLVIAYDMSKTDREAYARVNEFAEAVQSADYPIIGLSASLDSEVEKMRHELQTPFPFATMDLTTLKTIIRSNPGLVMLKEGTVAGKWHYNDIPDFEK 375
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: G8R4Y4_OWEHD (Putative membrane protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801) TaxID=926562 RepID=G8R4Y4_OWEHD) HSP 1 Score: 179 bits (454), Expect = 2.400e-51 Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 1
Query: 124 YYVLNHLPQGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLL--------------------------EIPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYH 612
Y V + +GMKSAEELG++ T+Y TIY ++N+ TGE +K+SS+AYV E WW+ +DW++L D++ETVVL GYEPPVHDF++ L +ITDQVL +FL+ IP G++ASLP V+++K T F +A +DETTLKTIVR+NPGIVLL++G V KWH++
Sbjct: 180 YAVGKSISEGMKSAEELGVQATEYGTIYVMKNTSTGEEKKISSKAYVDEKWWENKDWEMLSDKTETVVLVHGYEPPVHDFVMTLEDEDITDQVLNMPAVFLVISYKMEITDDEAYAKINEFAGKAEAVTIPLYGVSASLPEVVDQKRHELQTPFPYAVMDETTLKTIVRSNPGIVLLKHGRVAAKWHHN 368
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A401XLP8_9FLAO (Uncharacterized protein n=1 Tax=Thermaurantimonas aggregans TaxID=2173829 RepID=A0A401XLP8_9FLAO) HSP 1 Score: 155 bits (392), Expect = 3.890e-42 Identity = 89/253 (35.18%), Postives = 143/253 (56.52%), Query Frame = 1
Query: 4 ILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLLEI--------------------------PFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYHLINAAEKYLA 642
+LLVLI + I R I+P+L ++ +S + C+IL +VL HLP +GMK+AEELGL+ KY TIYTL+N++TGE+++V+S+ Y++E WW++E+W+I D++ TV + +GYEPP+HDF I L G +IT VL +++ L+ + G+T S S E + +A+ D TTLKT++R+NPG+V+L G V + + + +A++ +A
Sbjct: 126 VLLVLILFLLIYRDAIKPILSDRVSLGIVFVSVIACLILARHVLYHLPFIDFRPYAVGKSIVEGMKTAEELGLESPKYMTIYTLKNTRTGETREVNSDEYLAERWWEREEWEIQSDKTRTVKVRKGYEPPIHDFKIVLDGEDITQDVLSADKVMLVIMYNIHKTDLRNFSKINALADLAERKGAKVYGVTGSSQSDFEPIRHEVQAAYPWATCDMTTLKTMIRSNPGVVILGKGTVKAMFSHRDVPSADEAIA 378
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A6P2AZE9_9FLAO (DoxX family protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A6P2AZE9_9FLAO) HSP 1 Score: 151 bits (382), Expect = 1.090e-40 Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 1
Query: 124 YYVLNHLPQGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFL--------------------------LEIPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWH 606
Y + ++ GMK AEELGL+P KY T YTL N +TG+ + V S+AYV + WW+K +W+I +++ T ++ +GYEPP+HDF + G +IT+ VL ER+ L L + GLT++ P +IEE W + FA D+TTLKTI+RANPG+VLLE G V+ KW+
Sbjct: 181 YAIGKNIADGMKPAEELGLEPPKYLTFYTLVNQETGKEEVVDSDAYVKDRWWEKPEWQIDGERTFTKLVRKGYEPPIHDFDLIQEGEDITEMVLELERVILVVAYDLRKSNARLHAKVNSFVNEAEALGVQTYGLTSTDPVIIEELRHEWQMPYPFAVADQTTLKTIIRANPGVVLLEKGTVVGKWN 367
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A6L3ZKY7_9FLAO (DoxX family protein n=1 Tax=Phaeocystidibacter marisrubri TaxID=1577780 RepID=A0A6L3ZKY7_9FLAO) HSP 1 Score: 151 bits (382), Expect = 1.140e-40 Identity = 91/243 (37.45%), Postives = 134/243 (55.14%), Query Frame = 1
Query: 4 ILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERI-----FLLE---------------------IPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYH 612
IL +LI I+ NR IQP++ G +++++ + C ++VLNHLP +GMKSAEELG + Y T + EN + GE +VS AYV + W++K +W +L D SE+ +++GYEPP+HDFI++ +IT VL Q ++ +LLE LG T S +EE + FSF S D TT+KT+VR+NPGIV L+NGV++ KWH++
Sbjct: 127 ILTILILILVFNRDVIQPIVRKGTGGAIVAIATLLCFYNSHHVLNHLPRQDFRAYKIGTDIAEGMKSAEELGKEAPVYETFFIFEN-EAGERVEVSGTAYVEDKWYEKTEWTMLSDLSESRKIKDGYEPPIHDFIMESDTGDITTWVLEQPKVILVLSYLLEKADSDGLKAISAWSWPLEEAGYKVLGWTNSGYEAVEEARHEHSLPFSFVSGDGTTIKTVVRSNPGIVALKNGVIVGKWHWN 368
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A6N6RIA5_9FLAO (DoxX family protein n=2 Tax=Flavobacteriia TaxID=117743 RepID=A0A6N6RIA5_9FLAO) HSP 1 Score: 143 bits (360), Expect = 1.970e-37 Identity = 79/246 (32.11%), Postives = 131/246 (53.25%), Query Frame = 1
Query: 16 LIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLP--------------QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLL--------------------------EIPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYHLINAAEK 633
LI I+F RK+IQP++ + + C + +VLNHLP +GMK+AEELGL+ Y T++TL+N+ +GE +V + Y+ E WW+K +W++ D +E+ ++E+GYEPP+HD+ + +IT +L Q ++ ++ +I +G T+S+ IE F D T +KT++R+NPGIV LENGV++ KWH++ + + E+
Sbjct: 130 LILIIFFGRKFIQPIVSKKVALGFSGVVLLACFWITSHVLNHLPMVDFRAYKIGTDIEEGMKTAEELGLQGPVYQTMFTLKNANSGEVIQVDDKQYIDEGWWEKPEWELQNDLTESKLIEKGYEPPIHDYSQESDTGDITFWLLEQPKVVMVLAYELERADPEGLDAIGEWSWTMEGSDIVTVGWTSSVYETIEAAKHEHQIGLDFTVGDGTAIKTVIRSNPGIVALENGVIVGKWHWNDLPSREE 375
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A2D5N933_9FLAO (DoxX family protein n=1 Tax=Cryomorphaceae bacterium TaxID=1898111 RepID=A0A2D5N933_9FLAO) HSP 1 Score: 142 bits (359), Expect = 2.220e-37 Identity = 79/185 (42.70%), Postives = 114/185 (61.62%), Query Frame = 1
Query: 136 NHLPQGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLLE--------------------------IPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYH 612
N + +GMKSAEELGL+P ++ IYT+EN++ G Q++SS YV+E WW+K+DW + + S+T+ ++EGYEPPVHDF I E+TD +LG + ++LL IP+L L+AS+P T F+F DETTLKT+VR+NPG V+L+ GVV KK+H++
Sbjct: 185 NSIVEGMKSAEELGLEPPQFEVIYTMENAE-GTLQEISSTQYVNEKWWEKKDWNMRSELSKTIQVKEGYEPPVHDFSIMNDYGEMTDSILGLDEVWLLVAYNVRKTKERGWAPVLKTAEHLKEKGIPYLVLSASMPEEFSPFGFTDTTAFAFT--DETTLKTMVRSNPGWVVLKEGVVDKKYHFN 366
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Match: A0A2T4WF01_9BACT (DoxX family protein n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A2T4WF01_9BACT) HSP 1 Score: 142 bits (358), Expect = 3.170e-37 Identity = 76/181 (41.99%), Postives = 116/181 (64.09%), Query Frame = 1
Query: 148 QGMKSAEELGLKPTKYATIYTLENSKTGESQKVSSEAYVSENWWQKEDWKILKDQSETVVLEEGYEPPVHDFIIDLGGAEITDQVLGQERIFLLE--------------------------IPFLGLTASLPSVIEEKAKAWNTRFSFASVDETTLKTIVRANPGIVLLENGVVIKKWHYH 612
+GMKSAEELGL+P +Y +YT+ENS+ G Q++SS YV E WW+K++W++L + S+T+ ++EGYEPPVHDF I E+TD +L + ++LL +P++ L+A++P + ++ + SFA DETTLKT+VR+NPG V+L+NGVV KK+H++
Sbjct: 190 EGMKSAEELGLEPPQYEVLYTMENSE-GLRQEISSTQYVDEKWWEKKEWRMLSELSKTIKVKEGYEPPVHDFSIMNDYGELTDSILALDEVWLLVAYNVRKTKAHGWAPVLETTAMLKEKGLPYVVLSAAMPE--DFRSFGFTDTTSFAXXDETTLKTMVRSNPGWVVLKNGVVHKKYHFN 367 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig720.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig720.26.1 >prot_P-littoralis_Contig720.26.1 ID=prot_P-littoralis_Contig720.26.1|Name=mRNA_P-littoralis_Contig720.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=215bp LILLVLIGIVFINRKYIQPVLGSGPQNIVLSLSFVGCIILGYYVLNHLPQback to top mRNA from alignment at P-littoralis_Contig720:144916..145639- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig720.26.1 ID=mRNA_P-littoralis_Contig720.26.1|Name=mRNA_P-littoralis_Contig720.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=724bp|location=Sequence derived from alignment at P-littoralis_Contig720:144916..145639- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig720:144916..145639- >mRNA_P-littoralis_Contig720.26.1 ID=mRNA_P-littoralis_Contig720.26.1|Name=mRNA_P-littoralis_Contig720.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=645bp|location=Sequence derived from alignment at P-littoralis_Contig720:144916..145639- (Pylaiella littoralis U1_48)back to top |