mRNA_P-littoralis_Contig1182.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: D8LFC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC5_ECTSI) HSP 1 Score: 429 bits (1102), Expect = 1.060e-145 Identity = 218/343 (63.56%), Postives = 253/343 (73.76%), Query Frame = 1
Query: 1 MATTSHPATPPREPKRKRDTA----GLGSDDEDFATPPGGTRKVRVRTLLGPQSPNAATAPVSFMSVQRVSCCQFFVSQQPTASK-RKNIRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGVSAYVPPP 1014
M T+S+P +P REPKRKRDT GLGSDD+DF TPPG TRKVR T AA +P S + + ++PT S +K IRHDY PVDPQY MT E LF+EGHIA G FSYNHP FA+EAAAF+ VKI+GK VWQ+QP GPSTLHNN+++++ F SL PFL L LCK R S+ RLF KQRAQQYT SGRRHRDGKNGRWR CIT H+ GAP F++LEVGVADAR AKG A NP+ K+DGTPD+ DC +GSY IMDEVGTG+ SHAHHQAIID+ LP+HGA T FV+D DPI P TF++DV RIA GTAD V+AGVGV AYVPPP
Sbjct: 1 MTTSSNPRSPLREPKRKRDTDLDFFGLGSDDDDFCTPPGATRKVRPTTPXXXXXXXAAASPCGPKS----TASEGKKRKKPTVSTGKKKIRHDYRPVDPQYERMTTERLFSEGHIAMGSFSYNHPQFAEEAAAFNGVKIDGKSVWQQQPCGPSTLHNNVTIIDRFPSLAPFLVPLDNLCKRRDSTVRLFVKQRAQQYTTSGRRHRDGKNGRWRMCITVHNPGAPLGFKRLEVGVADARVAKGDQATNPWQLKADGTPDMECIDCTTGSYQIMDEVGTGTASHAHHQAIIDKNPLPQHGAPTMFVVDFDPISPHTFVDDVERIAEGTADKVKAGVGVPAYVPPP 339
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5K3Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q8_9PHAE) HSP 1 Score: 371 bits (952), Expect = 1.010e-123 Identity = 193/335 (57.61%), Postives = 228/335 (68.06%), Query Frame = 1
Query: 1 MATTSHPATPPREPKRKRDT----AGLGSDDEDFATPPGGTRKVRVRTLLGPQSPNAATAPVSFMSVQRVSCCQFFVSQQPTASKRKNIRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGV 993
MAT+S+P TP REPKRKRDT +GLG DD+DF TPPG TR+V T L P+SPNAAT+ SC P K K RH+Y PV QY MT LF +GHIA FSYNHP FA EA F+ V I GK VWQRQPSGPSTLHN ++++++F+SL PFLG L++LCK R S+DRLF KQRAQQY SGRRHRDGKNG WR C+T H+ GAP F++LE+ K+DGTPD+ DCP+GSYH MDEVGTG+ SHAHHQ IID+ L +HGA TTFV+D DPI P+TFI+DVARIA GT D V+A VGV
Sbjct: 1 MATSSNPRTPLREPKRKRDTGLEISGLGPDDDDFCTPPGVTRRVANTTPLTPRSPNAATS----------SC-------GPKGKKPKKSRHEYKPVPSQYEMMTTARLFGDGHIARSNFSYNHPQFAKEADTFNGVTIAGKQVWQRQPSGPSTLHNKVTIIDHFSSLAPFLGPLEKLCKPRDSTDRLFLKQRAQQYITSGRRHRDGKNGLWRMCVTVHNPGAPPGFKRLEL-------------------KADGTPDMECIDCPAGSYHTMDEVGTGTASHAHHQEIIDKNLLREHGAPTTFVLDFDPIDPNTFIDDVARIAEGTVDKVKAAVGV 299
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5L1U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1U0_9PHAE) HSP 1 Score: 332 bits (850), Expect = 2.610e-109 Identity = 175/342 (51.17%), Postives = 210/342 (61.40%), Query Frame = 1
Query: 1 MATTSHPATPPREPKRKRDTA----GLGSDDEDFATPPGGTRKVRVRTLLGPQSPNAATAPVSFMSVQRVSCCQFFVSQQPTASKRKNIRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGVSAYVPPP 1014
MAT+S+P TP RE K KR+T GLGSDD D P DP++A+MT E LF+EG+I G FSYNHP F E A F+ VK+NGK WQ+QPSGPSTLHNNI V ++F SL PFLG L +LCK RPS+DRLF KQR QQ KSGRRH D KN WR C+T + AP +QLE+G+ DA +AKGG AVNP+ ++DG PD RFDC +GSYH+MD V TG SHAHHQA++++ + KHGA TTFV+D+DP+ DTFI+DVA IARGTAD V GVG SAYVPPP
Sbjct: 1 MATSSNPRTPLRESKTKRNTDLDIFGLGSDD------------------------------------------------------------DLPPTDPRHANMTIERLFSEGYIVTGGFSYNHPQFEREMAKFNGVKVNGKPTWQKQPSGPSTLHNNIVVTDHFRSLAPFLGPLAKLCKPRPSTDRLFTKQRVQQSIKSGRRHHDAKNAPWRVCVTVANLSAPKGLKQLEIGMTDASKAKGGGAVNPWQLQADGEPDARRFDCVTGSYHVMDTVATGLDSHAHHQALVNKELILKHGALTTFVLDLDPVNLDTFIDDVAEIARGTADAVIDGVGESAYVPPP 282
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5KI01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI01_9PHAE) HSP 1 Score: 307 bits (786), Expect = 1.250e-99 Identity = 169/325 (52.00%), Postives = 203/325 (62.46%), Query Frame = 1
Query: 61 AGLGSDDEDFATPPGGTRKVRVRTLLGPQSPNAATA-----PVSFMSVQRVSCCQFFVSQQPTASKRKN---IRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGVSAYVPP 1011
A + E F TPPG TR+V T L P+SPNAA + P+ +R + P ASK K RH+Y PV QY MT LF++GHIA G FSYNHP FA EA AF+ V I GK VWQRQPSGPSTLHNN++++++F+SL PFLG L++LCK R S+DRLF KQRAQQY SGRRHRDG+NG WR C+T H+ GAP F++LEVGVADAR AKGG A+NP+ K+D L +HGA TFV+D DPI P+TFI+DVARIA GTAD V+AGVGVSAYV P
Sbjct: 9 ASVRDPTEFFCTPPGVTRRVANATPLTPRSPNAAASSCGPKPLKSKGEKR---------KTPPASKGKKPKKARHEYKPVPSQYEVMTTARLFSDGHIATGNFSYNHPQFAKEADAFNGVTIGGKRVWQRQPSGPSTLHNNVTIIDHFSSLAPFLGPLEKLCKLRDSTDRLFLKQRAQQYITSGRRHRDGRNGLWRMCVTVHNPGAPPGFKRLEVGVADARVAKGGDAINPWQLKADNL-------------------------------------LREHGAPATFVLDFDPIDPNTFIDDVARIAEGTADKVKAGVGVSAYVCP 287
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5K5U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U5_9PHAE) HSP 1 Score: 282 bits (722), Expect = 4.170e-88 Identity = 142/240 (59.17%), Postives = 168/240 (70.00%), Query Frame = 1
Query: 295 MTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGVSAYVPPP 1014
MT E LF+EGHIA G F+YNHP FA+EAAAF+ VK+N K V Q QPS PSTLH +I + +YF+SL PF L+ LCK RP ++RL HRDGKNG WR CIT HD AP ++ EVGVADA AKGG A+ P K D PD RFDC +GSYHIMD+VGTG+ SHAHHQAIID++ L H A TTFVID+DPI P TF++DV IA+GT+ V+AGVGV AYVP P
Sbjct: 1 MTTERLFSEGHIAIGSFAYNHPQFAEEAAAFNTVKVNRKPVRQTQPSSPSTLHKSIVIADYFSSLTPFSKQLEGLCKPRPKTNRL---------------HRDGKNGPWRMCITAHDPAAPPHTKRSEVGVADASNAKGGGALYPRQLKDDRKPDSVRFDCAAGSYHIMDKVGTGTNSHAHHQAIIDKSVLSTHEALTTFVIDLDPISPHTFVDDVENIAKGTSIEVKAGVGVPAYVPTP 225
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5J6K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K4_9PHAE) HSP 1 Score: 263 bits (671), Expect = 9.300e-84 Identity = 121/184 (65.76%), Postives = 147/184 (79.89%), Query Frame = 1
Query: 295 MTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQ-LCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQ 843
MT +F EGHIA G FSYNHPLF EAAAF+++K++GK VWQ+QP GPSTLHN++ + + F SL PFLG +++ LCK RP++DRLF KQRAQQYT SGRRHRDGKNG WR C+T HD AP +QLE+G+AD +AKG AVNPF TK+DGTPD RFDCPSGSYH+MDEV TG++SHA H+
Sbjct: 1 MTTARIFNEGHIATGSFSYNHPLFEKEAAAFNDIKVDGKPVWQKQPPGPSTLHNSVVINDRFPSLAPFLGPVEKKLCKPRPTTDRLFLKQRAQQYTTSGRRHRDGKNGPWRMCVTIHDPAAPPHAKQLEIGLADGSKAKGDGAVNPFQTKADGTPDSRRFDCPSGSYHLMDEVATGTVSHASHK 184
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5KRD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD3_9PHAE) HSP 1 Score: 219 bits (559), Expect = 4.850e-66 Identity = 130/283 (45.94%), Postives = 151/283 (53.36%), Query Frame = 1
Query: 172 VSFMSVQRVSCCQFFVSQQPTASK-RKNIRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRLPKHGAETTFVIDIDPIKPDTFIEDVARIARGTADVVRAGVGV-SAYVPPP 1014
V S RVS C F++QQP ASK RK IRHDY V P+Y DMT E L AEGH+A G F +H FA EA + V I GK G + ++ KTR +G W CIT HD AP++F+QLE+G D +AKGG A+NPF K DGT D FDCPS SYHIMD VGTG HAHHQA ID+ L HGA TTFV D++PI PDTFI+DV IARGTA + G SA VPPP
Sbjct: 13 VIIRSAPRVSYCHLFLTQQPCASKKRKKIRHDYRSVLPEYEDMTTERLVAEGHVATGSFFIDHNHFAQEAEKSNVVTIGGKR-----------------------------GDVTEMGKTR--------------------------SGGW-MCITIHDPAAPSNFKQLEIGEVDGSKAKGGHAINPFRAKPDGTTDATTFDCPSPSYHIMDRVGTGLHFHAHHQAKIDKRLLDVHGAATTFVDDMNPINPDTFIQDVDVIARGTAGALGPNAGCESAPVPPP 239
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5KU06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU06_9PHAE) HSP 1 Score: 205 bits (522), Expect = 6.510e-61 Identity = 103/174 (59.20%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 193 RVSCCQFFVSQQPTASK--RKNIRHDYSPVDPQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAK 708
RVS F++QQP ASK RK IRHDY V P+Y +MT E LFAE H+A G F +H FA E F++V I GK VWQ++PSG STLHN+I++ E+F SL P L L+ LCK RP + R FKKQRAQQYTKSGRRHRDGKN WR CIT HD A + F++LE+GVADA + K
Sbjct: 8 RVSYSHLFLTQQPCASKEKRKKIRHDYRSVLPEYEEMTTERLFAECHVATGSFFIDHNRFAQEGERFNDVTIGGKPVWQKKPSGHSTLHNSIAIAEHFPSLAPLLIPLEALCKPRPGTARRFKKQRAQQYTKSGRRHRDGKNAEWRMCITVHDPAALSLFKELEIGVADASKVK 181
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Match: A0A6H5K7M5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M5_9PHAE) HSP 1 Score: 139 bits (349), Expect = 6.680e-34 Identity = 80/196 (40.82%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 280 PQYADMTAEHLFAEGHIAAGLFSYNHPLFADEAAAFDEVKINGKHVWQRQPSGPSTLHNNISVVEYFTSLVPFLGGLQQLCKTRPSSDRLFKKQRAQQYTKSGRRHRDGKNGRWRACITCHDQGAPADFEQLEVGVADARQAKGGWAVNPFWTKSDGTPDVNRFDCPSGSYHIMDEVGTGSISHAHHQAIIDETRL 867
P+Y +MT E LFAEGH+A G F +H FA EA F++V I GK R +S R +N WR IT HD AP++F QLE+GV D +AKGG A+NPF K DG+ D FDCPS SYHIMD VGTG SHAHHQA ID + L
Sbjct: 30 PEYEEMTTERLFAEGHVATGSFFIDHNRFAQEAEKFNDVTIGGK---------------------------------------RATSPRW-------------------ENAEWRMFITIHDPAAPSNFIQLEIGVVDGSKAKGGHAINPFRAKPDGSTDATTFDCPSPSYHIMDRVGTGHHSHAHHQAKIDTSLL 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1182.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1182.7.1 >prot_P-littoralis_Contig1182.7.1 ID=prot_P-littoralis_Contig1182.7.1|Name=mRNA_P-littoralis_Contig1182.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=342bp MATTSHPATPPREPKRKRDTAGLGSDDEDFATPPGGTRKVRVRTLLGPQSback to top mRNA from alignment at P-littoralis_Contig1182:13003..15158+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1182.7.1 ID=mRNA_P-littoralis_Contig1182.7.1|Name=mRNA_P-littoralis_Contig1182.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2156bp|location=Sequence derived from alignment at P-littoralis_Contig1182:13003..15158+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1182:13003..15158+ >mRNA_P-littoralis_Contig1182.7.1 ID=mRNA_P-littoralis_Contig1182.7.1|Name=mRNA_P-littoralis_Contig1182.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1026bp|location=Sequence derived from alignment at P-littoralis_Contig1182:13003..15158+ (Pylaiella littoralis U1_48)back to top |