mRNA_P-littoralis_Contig720.24.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig720.24.1
Unique Name	mRNA_P-littoralis_Contig720.24.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D7G2E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E3_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 6.760e-51
Identity = 98/181 (54.14%), Postives = 117/181 (64.64%), Query Frame = 1

Query:  205 MKVSNRWLGLLGAVAATSLMGVTATSSSITTCDDDSIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSPDTICGQYSGFACIDPEAYCVDDDDVIVADINVVFP--DLVGDGFCDESNNKPEQNYDGGDCCECTCKTDFEFYCRAFDCIDPEAWCADDDIITA--SMSYEFIYWEQD 735
            MK SN WLGLLGA A T+L     T+  +TTC D  IGNG CD  NN   C YDGGDCC+CTC   P  GTS D +C   S +ACIDP A CVD+DD + AD+   +      GDG CD+ NN PE +YD GDCCECTC+TD E  C+ F C+DPEA CA+DD      +MSYEF+ WE +
Sbjct:    1 MKASNIWLGLLGA-AVTTLPTGADTTGYLTTCYDYGIGNGECDPRNNKEECDYDGGDCCECTCD--PSLGTSDD-LCKSDSFYACIDPLAPCVDEDDDVTADMFHEYQRWHQFGDGLCDQENNVPEYDYDDGDCCECTCETDNEHLCQFFVCLDPEAECAEDDDTNTDDAMSYEFMLWETE 177

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 3.450e-38
Identity = 94/192 (48.96%), Postives = 113/192 (58.85%), Query Frame = 1

Query:  187 KRLPATMKVS-NRWLGLLGAV-----AATSLMGVTATSSSITTCDD-DSIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSPDTICGQYSGFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKTD-FEFY-----CRA-----FDCIDPEAWCADDDIITASM 705
            +R+   MK S NRWLGLLGA      +A+S+  V  TS     CD    IGNG C+MGNN   CG+DGGDCC+CTC D   T       CGQY G+ACIDP+A CVDDD V V  + N   P  +G+G CD   N  +  YDGGDCCECTC    + +Y     C+      F CIDP+A C DDDI+TA M
Sbjct:   51 RRVIMMMKTSSNRWLGLLGAAVIMWSSASSV--VATTSDQFDACDAAQDIGNGRCNMGNNIEECGFDGGDCCECTCEDGEYT-------CGQYYGYACIDPDATCVDDDAVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEM 233

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.490e-35
Identity = 71/127 (55.91%), Postives = 85/127 (66.93%), Query Frame = 1

Query:  334 MGNNNRVCGYDGGDCCKCTCVDIPGTGTSPDTICGQYSGFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCK--TDFEFYCRAFDCIDPEAWCADDDIITASM 705
            M NNN  C YDGGDCC+CTC D      +P+  CG++SGFACIDPEA CVDDD   V  I N  +P  +GDG+CDE NN     YDGGDCCECTC+   D +++CR F C+DP A C DDD +T  M
Sbjct:    1 MDNNNAACAYDGGDCCECTCED------TPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHCRNFACVDPNAPCVDDDSVTIDM 121

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 1.320e-33
Identity = 83/175 (47.43%), Postives = 104/175 (59.43%), Query Frame = 1

Query:  208 KVSNRWLGLLGAVAATSLMGVTATSSSITTCDDDSIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSPDTICGQYS-GFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKT---DFEFYCRA----FDCIDPEAWCADDDIITASM 705
            K S+R LG+LGA A  S +G          C +D  G+G+C + NNN  CGYDGGDCC+CTC +    G   +  C +   GFACIDP+A CVDDDD+ +    N V  DL G+G+CDE NN     YD GDCCECTC +   D ++YC +    F CIDP A C DDD +T  M
Sbjct:    3 KHSSRLLGVLGAAAILSSVGA---------CWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNP--WGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNCVTSDL-GNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWYCSSDGSGFACIDPAAPCVDDDDVTIDM 165

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 4.730e-33
Identity = 77/160 (48.12%), Postives = 96/160 (60.00%), Query Frame = 1

Query:  298 CDDDSIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSPDTICGQYSGFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKTDF--EFYCRA----FDCIDPEAWC------ADDDIITAS--MSYEFIYWEQ 732
            CD   +G+G+CDM NNN  C YDGGDCC+CTC         P+  CG  SGFACIDP A CVDDD V V  I N  +  ++G+G+CDE NN     YDGGDCCECTC++ +  ++ C +    F+C DP A C        DD  T    MSYEF+ WE+
Sbjct:  178 CDAVGMGDGYCDMDNNNAACAYDGGDCCECTC--------EPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESAWNDDYTCSSEHGTFNCKDPNASCFGEETTGSDDFSTDDQPMSYEFVPWEE 329

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 4.860e-32
Identity = 70/138 (50.72%), Postives = 81/138 (58.70%), Query Frame = 1

Query:  310 SIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIP---GTGTSPDTICGQYSGFACIDPEAYCVDDDDVIVADINVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKTDFEFYC---RAFDCIDPEAWCADDDIITASM 705
            S+GNG+CD  NNN  CGYDGGDCC+CTC  +    GT       CG   GFACIDP A CV+DDD+ +  +       VG+GFCD  NN     YDGGDCCECTC+      C     F CIDPEA C D+D  T  M
Sbjct:  129 SVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGN--GFACIDPNAPCVNDDDITLDIVENCDSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECGRWSGFACIDPEAPCVDEDSFTVDM 264

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 8.340e-31
Identity = 76/158 (48.10%), Postives = 90/158 (56.96%), Query Frame = 1

Query:  298 CDDDSIGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSP-----DTICGQY-SGFACIDPEAYCVDDDDVIVADI--NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTC---KTDFEFYCR-----------AFDCIDPEAWCADDDIITASM 705
            CD   +G+G+CD  NNN +CGYDGGDCC+CTCV     G SP     D +C    SGFACIDP A CV+DDD I AD+  N  +   +GDG+C E NN     YDGGDCCECTC     D ++               F CIDP A C DDD +T  M
Sbjct:   54 CDTSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDD-ITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGM 210

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 6.440e-30
Identity = 72/136 (52.94%), Postives = 82/136 (60.29%), Query Frame = 1

Query:  313 IGNGFCDMGNNNRVCGYDGGDCCKCTCVDIPGTGTSPD-TICGQYSGFACIDPEAYCVDDDDVIVADINVVFPDLVG------DGFCDESNNKPEQNYDGGDCCECTCKTDF-EFYCRAFDCIDPEAWCADDDIIT 696
            IG+G CD  NN   C YDGGDCC CTC  +P  GT  D ++CG+ + FACIDP+A CV+DDD       VV     G      DG CD+ NN  E  YDGGDCC CTC  DF E   R F CIDP A CADDD +T
Sbjct:  104 IGDGNCDKDNNTEECDYDGGDCCSCTC-QVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDFYECGIRGFACIDPSAECADDDDVT 238

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.010e-29
Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 1

Query:  310 SIGNGFCDMGNNNRVCGYDGGDCCKCTC-VDIPGTGTSP-DTICGQYSGFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKT--DFEFYCRA----FDCIDPEAWC------ADDDIITAS--MSYEFIYWEQ 732
            S+G+G+CD GNNN  CGYDGGDCC+CTC  + P       D  C ++S   CIDP A CV DDD+ V    N  +   +G+G+CD +NNK E  YDGGDCC CTC++  D ++ C +    FDC DP A C        DD  T    MSYEF+ WE+
Sbjct:   98 SVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFS---CIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWEE 252

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BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 3.700e-29
Identity = 74/158 (46.84%), Postives = 94/158 (59.49%), Query Frame = 1

Query:  310 SIGNGFCDMGNNNRVCGYDGGDCCKCTC-VDIPGTGTSP-DTICGQYSGFACIDPEAYCVDDDDVIVADI-NVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKT--DFEFYCRA----FDCIDPEAWC------ADDDIITAS--MSYEFIYWEQ 732
            S+G+G+CD GNNN  CGYDGGDCC+CTC  + P       D  C ++S   CIDP A CV DDD+ V    N  +   +G+G+CD +NNK E  YDGGDCC CTC++  D ++ C +    FDC DP A C        DD  T    MSYEF+ WE+
Sbjct:  460 SVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFS---CIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEESTGSDDYSTDDEPMSYEFVPWEE 614

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig720.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G2E3_ECTSI	6.760e-51	54.14	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LEP6_ECTSI	3.450e-38	48.96	Uncharacterized protein n=3 Tax=Ectocarpus silicul...	[more]
D7G3F4_ECTSI	1.490e-35	55.91	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FI87_ECTSI	1.320e-33	47.43	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G4F9_ECTSI	4.730e-33	48.13	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G0S4_ECTSI	4.860e-32	50.72	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JM92_9PHAE	8.340e-31	48.10	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JTT4_9PHAE	6.440e-30	52.94	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KB04_9PHAE	2.010e-29	46.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JXR2_9PHAE	3.700e-29	46.84	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig720	contig	P-littoralis_Contig720:123820..133057 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7G5Y7
PFAMs	Beta_helix,Chlam_PMP
Model size	1170
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal peptide
Exons	4
Evalue	1.39e-23
EggNOG OGs	2BFIX@1\|root,2S176@2759\|Eukaryota
Ec32 ortholog description	Notch domain
Ec32 ortholog	Ec-00_005830.1
Cds size	561

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig720.24.1	prot_P-littoralis_Contig720.24.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig720 124225..129832 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791500.8914092-UTR-P-littoralis_Contig720:123819..124224	1680791500.8914092-UTR-P-littoralis_Contig720:123819..124224	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig720 123820..124224 -
1680791500.9557023-UTR-P-littoralis_Contig720:129832..129892	1680791500.9557023-UTR-P-littoralis_Contig720:129832..129892	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig720 129833..129892 -
1680791500.969715-UTR-P-littoralis_Contig720:132913..133057	1680791500.969715-UTR-P-littoralis_Contig720:132913..133057	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig720 132914..133057 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791500.905746-CDS-P-littoralis_Contig720:124224..124409	1680791500.905746-CDS-P-littoralis_Contig720:124224..124409	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig720 124225..124409 -
1680791500.9273913-CDS-P-littoralis_Contig720:125410..125632	1680791500.9273913-CDS-P-littoralis_Contig720:125410..125632	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig720 125411..125632 -
1680791500.9417927-CDS-P-littoralis_Contig720:129678..129832	1680791500.9417927-CDS-P-littoralis_Contig720:129678..129832	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig720 129679..129832 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig720:123820..133057-
coding sequence from alignment at P-littoralis_Contig720:123820..133057-

protein sequence of mRNA_P-littoralis_Contig720.24.1

>prot_P-littoralis_Contig720.24.1 ID=prot_P-littoralis_Contig720.24.1|Name=mRNA_P-littoralis_Contig720.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp
MKVSNRWLGLLGAVAATSLMGVTATSSSITTCDDDSIGNGFCDMGNNNRV
CGYDGGDCCKCTCVDIPGTGTSPDTICGQYSGFACIDPEAYCVDDDDVIV
ADINVVFPDLVGDGFCDESNNKPEQNYDGGDCCECTCKTDFEFYCRAFDC
IDPEAWCADDDIITASMSYEFIYWEQDSSYRFSYPM*

mRNA from alignment at P-littoralis_Contig720:123820..133057-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig720.24.1 ID=mRNA_P-littoralis_Contig720.24.1|Name=mRNA_P-littoralis_Contig720.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9238bp|location=Sequence derived from alignment at P-littoralis_Contig720:123820..133057- (Pylaiella littoralis U1_48)
CGAAGTATGATGTGAATGCTTCATGAATGCATTGATCACACGCACACACA
CACCTCGTCATCACTCTCTTCAGCTGTTCTCTGACTCCGACCTGCCGACA
GCATCAACTAATTACGAGTCAGACAGGATCGGTTCTTCAGCCAGGTACAA
TGAGCGGCTAGTTCAGTACTACTTGTAAAATCACCTGGTATGATACGTAC
TTCGTAAATTGATTGTACTTCGAAGGAGCTAGATAGCGTATGATAGCTGC
CGAGATGCTGATCCTCCCTTGGTTCGCGGCCTGCTCCACAGCCTGTGTGT
ACGTATCGTAGCAGACAGAGTTGGTTGTAATGGAAGCGACACCCGCTCGC
TCGTACGTTTCGTCACGGCTTGTTCATTGAGTATAAGCAGACAAGAGTAG
CCCTATACCCGATGTCGCACGTGTGCTGCAAGGAGTGGGTCTCACCCGGA
GTACTACACACATTCATGTATGTATGTGGTGATATATCCACTTTGCACCA
TCAGTCACTATCCACTTTTTTTACCACTGTGTGAACAGTCTGCGCAGACA
ACTAGTGGTTCATCAGGGGATATATTTGTGTGTGTGCATCTTATCACCAG
ACGTGCCATTTTTTTTCCGTGGGTGCAACTCTTTTGGGTGCGTGGAAAAG
GTTCGCTGCCAGTAAGTCTTGGAGCAAAAAGAGCTCTCTCTCTCTTCATA
CCGTACAGTAAGCAGATCATGGGGTAAATTCTTGCTCTATTTATATCGCC
TCCCCCATACCAAACACAACCAACCCTAAGCTCTCATCAAATATTGGAGT
ATCGCATATATTTTTTTATGTATGCGACTGTGAGGCAAACCCTCCATTAT
CTCCTTTGTCTTCCTTCCATCCTATTATCTTTCTTCCGTACCTTGTGCTC
TGCCTCCGCGTTCTTTTGCACCATCCTTCTTCTATTATTATCTTCCTTCC
TAATATTTTCCTATATATATATTCTTCTGTTTCCTGCTGTTGTGATGCAG
TCTACACCAACGGCAGTAAAGTGGCAAAAAAATTATTTGTTCCTGCAAAT
CAGATTCCGAGCTCACGCATACCGGTAGTCTATACCACTTAAATAAGACA
CCAGAGGAATTTTCGAAGAAGGTTTCTCTGGCTTGTTCACAAACACATAC
TCGAAGTATATTATACAAAACCTTTAAAGCAGTCACATGGTACACCGTGT
CCCTCATCAGGTACGTGCATGATGCTGTATACGAAGTAATATTTTGGGTG
TGAATCCTTGTGCTCGATGGACTGCTGTTATTCTTGTGGTCCAGGTGGTG
TTCGGTGTTTGTTTGCAGCATACAGTCCCGCGTCACCTGCCCAGCATATG
GCCGACGATGCTGTGAGCCCAAACAACACGACAAGGAAACACAGACAACG
CCCGGGCTTGAAAAGATCCCCATATATAGCAAACGGTCATATGGCTCGTG
ACCACACCCCGTAATATTTCAGACAAATAAATATCAAAAAGTGTGAGTTT
TGGCCCAAAAACGATTTTTCGACGCGGATTCGAGTCCCAGCCTTCTTGCG
GTGTTGTTCTTCGTCCTTTCCCGTTTTTTTTTACCATTTTTTCTTTCTAT
TTTTATCCAGCATTCATTCGTATTCTATCCTCCGGACGGTGGAAGACCAA
CCTCATGAAATATTTGAAAAAAGTGGTTCCAATGTCTGGCTAGAACACTT
ATATCCATGACAATAAAAATAGAGTGAAAAATATTGTATTTGGCGTTCAG
GGCAATGCATGCACGCAAAATATCGTAGGTTGCATAAGATATCACACCGA
CCGGTCCCCGGTGTCGTGGTGAATAATTTTGAGCGCTGATTTTTTCAATG
GATTTTTAGGTCTGGAGGGTCTCCGAAAACTCCTAATTACCCTTCTAAAA
GCAAGCTACGGATGCCCCGGGGATACTGTTTATCTATCCCCGTCATTTTG
CGGTAAATACCGGTCGGCACCTGGCAAAGCTCTGATTTGCGGTTATTACC
GGTCGGTAACAGGTAAATTGGCGGTAATGGCGAATTTTGACTGAGGGGTG
TGGTATTTTCTGTCACCCTTTTCACTGCTCGAGAGACAGACTTTGTTCCT
TTTTCGGAATTAACAAAATAGCTACACACACACGGTGGTATTGCGTAACT
TTTCGGAGGGCGTGTGGTATCTTAAGAAAGTGTTATATATTATGCAACCT
ACGGTACCCCTACATTATTCGAAAACCAAGGCCATCTTGGGCGCCCGGGG
GGGGGCGTTGTGAGACCCTCGCGGGGTACCTCTCTATCTGGCACTTCCTT
TTTTCATTCTCCATCCATCTCCGGGGGTTGGTAACATTTTTATTTGAAAT
AGAGTTTGTTTATGAAGTATGGCTCACATTTTGAAACCGGCCACTTTGAT
ATTGGACATCGGTATCTCGCCGCTTGCTCTCGGACGGAATGAATGGTGGC
AGTTTTAGGGCGGGTATGCTACGTAACATATTCTCTGCCTTCAAAGCAAC
AAAATATGATCGGAGTATCAAAGCTCTTGAACATGTATACTTCGTACACT
GTGTTACAGGGTATCCACAACAAATATCCCTTTGAAGACTGATGCCATTG
AAGATTTTACAGAACAAGTAAGTCTGTCTTTGTGATGCTCAAATAAATAC
TCCGGGGTATCTTTTAGTGGAGAGATAATGCTGTTTGTTTTGCAGTTATT
GTGTTTCGCTCCGCTGCTGCCTGTTGTACATGCTGTCTTGCATCAGTAAC
GTGAGCAGAGTAATCAATCATGCAAACACCCGATGCAAGTCTTGGCTGTG
CGTCGGTTTTGTGTTATCGTGTCGCCCTCATAAGTAGCGGAAACGAACTT
TCCACACACCGTGTGATAACATATATCTGCTGTATCGTGGTGCTCCTGTG
AGAGTGTTGCCTGCGCTTTAGTTTGCCTAACACAACAGACAGAATGAAAA
CCGCGTCATTTTCGGGCGTGATGGTTATTTTGGTATCATAAGAGTAGCCA
CGACACGAGTGTGCTCTAGAAGCAGCAGATATGCCCAAACGTACAGCGTG
GTCGCGTTGAATTGCAACACGGGCACCTTTTCAAATATCACGAACACTGC
TGCTGCTCACATCCTGACAACCGCTGTTTGACACGACTTTCCCCACTTGC
TCTGGAATTAAACAGCGCTTGATCAGGCTGATATACATATATTTCCCGCG
AAGAGTGAAACGGCTGCCTGCCACAATGAAGGTTTCCAACCGCTGGCTGG
GTCTCCTCGGTGCAGTAGCCGCCACGTCTCTGATGGGCGTTACTGCTACC
TCGTCGTCCATCACAACGTGCGATGACGACAGCATTGGAAATGGCTTTTG
TGACATGGGCAACAACAACCGAGTCTGCGGTGAGTCAACCTTCTGGCCGT
TGATTCACGTACGGTATGTATGCGCAAAAATAGGACGACAATAATACTAT
AGGAAGTATATACTTCGTATAATAATATTCTTTGATGGGCTGAACGTGAC
GACTCGTCGAGAAATGAGAGTATTATTATGGTCGTTCCTCAAAAAAAACC
CTAGGCTGAAAGCACGGACCTTATACCCGGGACGTGCTCGTTGACAGTGG
ATTTCTGAAGGTAGGCCTGCCCCCCCCGCGTTCCAACGTCGGGGTGTATT
TCTGATCCAGCACATGTATCTTCTCCCTGTTGTTTTGCCTTCCGGTTAGG
GCACAAAAAATTGTTTCATATCCGGAGTTTATCAAGAATAATATCAGCGG
CTTAGTGATATTGTTCGCTCCATTTACGGTAGGTCACAGCAGCAACTCTG
TAGTAGTAGTCCTCTATGACTCGAAGTCAAACGTCCAGCCTACAGTATAG
GTGCGTTGTGTGTGCAGATAAAGAGACCTCCACAGTGAATTGCAGCCTAG
ACCTGATGATGACCCCACATCGCGTTGATACGGCCGGGTGGCAAGCCTTG
AACAGGTCAATGTAAAGCCGCGCAAGTGTCCGTTGCCATGGCGTGATGGA
GGTACGGTGTTGACTACCCAGCACTTTCCCCGCCCTTCGAAAATGCGTTG
AAAAAAAGAGGAACTTTTGGGAAGCTGCCTCGTGAACGCCCACACGTTTT
TGAATTTGAGGAGCCCCAACCTTCTGAGCTTTTCAAAAAAGCTGACCGCA
GGAATCAAACCAGGTGTTCTGATGGACGCAAAAGAATGTTGCACACTGTC
ATCCTGTAGTAGTGCAGCCGAATAGTGACGATTTTTTATTTTTCTCGTCT
TGTTGATTACTTATATGTTGTTTCGGAGCAATATTGCAACGAGTGGTTTT
CAGCCCACATTCGATAGTAGTAGGACGCTTGAACGCCCATCAGCGCTGTT
GCAAGCACCCAACATATCAGGCTTATTTCAATGTGCGCTCGTTTTCGATG
AAATTTAATGAAATTAAAAATCACCAATAATGGAGACTCAACATTTTTTT
CTACATCCGGGGGAGGGAATGCTTTTATTAAGTTTTCAATAATTAATTCA
AATGTGTCTTGAGTTTTTTTCACTAGTTTTTCTTTTCGGACATACCCTTG
TTGGAAGTTTTGGAGGGACTGACCTGTGCAACCGGTCGAGGAGTGAGTGA
GTGCGATCATTTTTAAAACTCTTTCAGATCTACGGCATATTTATTCGTTT
TTTTGTGATTGTTTTTATAACAAAATATCGTGTCTTGAGGCTTTTTCGTT
TGTTGTTTTGGGGTGTACTTCGAAGTACCTGGTACATTATTGGGTCAGCC
AAATTATCTCATGGGACATCTCATGAGAATCTCATGAGAAGATTTTTTCT
CATGAGATGCTCATGAGAGTCTCATGAGATGCTCATGAGAGTCTCATGAG
ATGCTCATGAGATGCTCATGAGAGTCTCATGAGAGTCTCATGAGAAGCTC
ACGAGAGTCCCATGATCGCAAATATAATTTCTTACGAAGTACCAGTCTGT
CCCGGAATATAGTTATTTCCGATTTGGATAACAACGTGAATATCTTGGGG
TAGGGTACGATTTTTTGAATGCGGGTTTTTGCACTGTGTTCACGGTGAGC
TGGGCCTGAAAACTGCAGAACGAATTTCCGAATGACCAAATAAAACGTTT
CGTATCCTATCACGAAGGAAGGTCACTCGGAGATCTTCGAGCATTACCCA
CCGGTTGAGGCGGTTAAACCCTTATTTTTCTTATTTTTTTTACATCGGAT
TTGGGGCTCTCTCTCCCGGTTCCAAAAAGCCATTAAAAAAAGTGGTCACG
AAAAAAATGCAACCACCACTAGCTTTCTTCAACTATCGATTTTTTACGAC
CTTTTTTTCTAGCGCGAGTTGTAGGCAGCCAAGTGACTTTTTAGAGCGCG
GGGAACGCCCGTGCTGTTCTCGCGATTGCGCTCGTAAAAAAACAAATTGG
AAAACAATATTTTTTTTTCATATCCGAACTTTGATTTTTTTTTTCGAAAA
CAAAAAAAAATCGATCTTGTTTTTTTACGAGCGCAATCGCGGGAACAGCA
CGGGCGTTCCCCGCGCTCTAAAAAGTCACTTGGCTGCCTACAACTCGCGC
TAGCAAAAAAAGATCGAAAAAAATCGATAATTGAAGAAAGCTGGTGGTGG
TTGCAGTTTTTCGTGACCACTTTTTTTAATGGCTTTTTGGAACCGGGAGA
GAGTCCCAAATCCGATGTAAAAAAAATAAGAAAAAAAAGGGTTTTAGCCG
CCTCAACCGGTGGGTAATGCCCGAAGATCTGCGAGTGACCTTCCTTTGTG
ATAGGATACGAAACGTTTTATTTGGTCATTCGGAAATTCGTTCTGCAGTT
TTCAGGGCCAGCTCACCGTGAACATAGTGAGTGCAAAAACCCGCATTAAA
AAAATCGTACCCTACCCCAAGATATTCACGTTGTTATCCAAATCGGAACT
TTATTCCGGGACAGACTGGTACATTTTTTGGGATCATGAGGAGCTGATGA
GCCCGCCATGAGATTCTTATGAGAATCTCATGGAGGGCTCATGAGAAACT
TGGCTCATGAGAGTCTCGTGAGTATCTCATGAGTGTCTCATGGAAGTATG
TCGTGAGACTCCCGTGAGACCGTCATGAGACGTCTCATGGAAATTGCAGA
TCGGATCAGAAAAACTTGAACAGCGCGCACAAGCTGACCTTGACATTCCG
TAGGGCGAGCCCAAAGAAACCCTTACCACATTGAGAGGAAGTCATCTTTT
TCACTATTGTGACATCTCCATGCACTCTCCACATGCACGGACATCGAGAT
CGTGATTTTTTATATCTTCGTCATTCATCCGAAGTACATTATATGATATG
AGTATCTAATTTTTCCCGCCCAAACGATAAAAAAAACAGGTCCCGCGTGG
AAAATGAGTGTCGATCGTTGAACCCATGAGACGTCTCATCATGGGGGTCT
CACGGGATGCTCGTGCGCACAAACCTAAAGAACGCGGCGAAAAATTCACC
CGTCTCATGAGACTCTCACGAGGTGTCTCACGGGTATCTCATGAGACTCT
CACGAGACGCTCATGAGTGCCTTAAGAGAACTTTCAATCTCATGGCGGTT
TCATGAGGAGAGCCTTTCAAGACAGTCGCTTGTAGGACTTATTTCCAAAA
AAATTAATGTTTTCATCTTATTAGAGTCTTGTGAAGGAGTAGACTGCTCA
GCCATCGGGTAGAAGGTTAACCATTTACCCGAGTGAGGACTATACCTCTT
AACACTCTCCGGCACTGACACCTGGGTGGGAAGTGATCAGGATCAACTTC
CCTGGAAGGATCGGATGCTTTTTCCGCCCAGGATTTTGTATGACAGAGCC
GGGGCCTTCAATGAGTGTTACTTCTCACGCACAGGTTTTCTGAAAAGGAA
GTGGGCACGTTGGAACCGAACCCACGACTTTTGACCTACTCAACGCCAAA
TGTGAAGGAGTAGACTGCTCAGCCATCGGGTAAAAGGTTAACCATTTACC
CCAGTGAGGACTACACCTCTTAACAGTCTCATAAGAGTCTCATGGCAGTC
ATATGTAGCCACGCTTCGCTCATGAGACCCTAACCCTAAACCTAAGACCC
TATGACACTACATAGTATTGTTGTTTTTGCTTCAACGAAAAACGGTTTTC
TCCAAAAAACCTCAAAGTCGGGTGGAGGTTGACCAACTATCTACTCTTAC
GATCGCAGGTTATGGCATCATTTCCCTTACCTTCGTCCTCCCAACGTTCC
CGAACCTACCCCTCTGGCCACCTGTACATCACGATAGCGGCGGTACCTCT
CGGCCATGCTGCATGCCGCAAAAGTGCGCCCTCTCTCGCCGTTGTTTTAT
GCTATCACCAAAAGAAGCCAGCTGCAACTGTTGCTGCCGTGTGTTTGAGA
GTTCCGGCTCGATTCCTCACTGATATCCAGTTTTTTCATTGCGATTGCCG
TTGTTTGTCTCCAACTGTCTCTCAGGTTACGATGGGGGTGATTGCTGTAA
GTGCACTTGCGTGGACATCCCCGGCACAGGCACTTCCCCAGATACCATAT
GCGGGCAGTATTCCGGCTTCGCCTGCATCGACCCTGAGGCGTATTGCGTG
GACGACGACGATGTTATAGTCGCTGACATCAACGTTGTGTTTCCTGACCT
CGTCGGAGATGGCTTCTGCGACGAAAGCAACAACAAACCGGAACAGAGTA
AGTCCATCATGTTCAGCCCACACGAATCACCAAACAGCTTTCTAATTACT
ACTAGCAATGCATAGGACTTACTCTCGATCAAGTACATTGTTTACTACTA
CAGTGTTGGCATCGATGTTTAGTTCAAGCAGCTGGATGTATGTGTGTGTA
AACAAACTGAAGTTGAATATCATCGGCTGACGACGGGCTTAGATTGCACC
TCCACGCTGGTGGCGTTTCAATCAGAGGAAAACTTTCCAGCTCTCTGCCC
TTACCGGCACACGGCGTACCCATCCGAACCTGGAGCGCAACACGAGTATG
GGCGGGAGTGACCCTGATACAGTTAGCCCCGACGATGCCACTCGTCTGAT
AGAACTGCAGAACGCGACGGGCATGCAATTCTATCGCGCATTGATGGAGT
TTCGGGTGTACAGCCAATACAGCCAGTCTCTTCTCGCCCTTCTTGAGGTG
TGCTGGAGGGGAACCTGACCGACCGTCGGTGCCGAGGATGCGGCGGGGAT
TTCGTATGGGCCGGGGGTGTTGGCAGTGGGGCATCAACGGGACACATACT
GCAGCCTTACTGAGCATACACACCATCCCCGCGTCCGGCCACACGGAGGA
GAGGTTGAAGAGCTTGTGCACTGGTTATCCCTCGCCTTCTCCCCTTCTTT
CCCTCGCCCGTCCTGTCTCCCTCTCGCCTCCTGTCTGAGTCTCTGTCGGT
CTGACCAGCACAACGGCGGTGGTTCTTTTGAATGGCGCTTACGGCCACCA
CATGCTGCCGGACAACTCTCTCGCTGTCTCTCTTATATTGGCCATCGAGA
TACGACAATAGTAGTCATATTTTCCATCGCAAAAGCCTAGAATGTTCTCT
GTTCCCTTCGTCATGAACTTCAGATGTGACAGCTACACATCCCCGGTGTC
CGAAGACTCCAACAAATCGATCAGGCGTGCCGGCGTGCTTCCTTTCGCAG
GCCTTTTTAAGTGTTTATCTTTTGGACAAAATGTTCCCCGTTCCTCAGAT
TACGATGGCGGTGATTGCTGCGAGTGCACCTGCAAGACCGACTTCGAGTT
CTACTGCCGTGCTTTCGATTGCATCGACCCTGAAGCTTGGTGTGCGGATG
ACGACATCATCACTGCGTCGATGTCGTACGAGTTCATATATTGGGAGCAG
GACTCTAGCTACCGGTTCTCGTACCCAATGTAGGGATGCTCACCGTGGGA
CTTCGCGGGTAGCGGAGTACAGTTATAAAGTGATGGTTGAACGTAGGGTA
TTTGCCGTGATCCGAGCTCTGCCTTTGGTTCTTCCAAGTGAATGTATGTA
CAAAATTTGCCCTGGGCACCTGTTTGTTGTTGATAGAGAATATGAAATAT
GAAATATGATGGATGATACCGTGTGCACTACTGTAGAGTCGAACTCGTTT
CGTGCACCTGTGAAGCCGAAATACGATGATGATACCGGGTGTAGCGTCGA
ACTCGTTTCGTGCACCTGCAGTCGTCTTCCTTTCCTCCTTCAGGGTCGCT
CGTAACATTCCATTGCACTTCGTCGGCACGTGGGACACAAAAAATGTAAA
GACCTTAAACTTTGCATCGTCGGAATTTTCAAGGTGCA

Coding sequence (CDS) from alignment at P-littoralis_Contig720:123820..133057-

>mRNA_P-littoralis_Contig720.24.1 ID=mRNA_P-littoralis_Contig720.24.1|Name=mRNA_P-littoralis_Contig720.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=561bp|location=Sequence derived from alignment at P-littoralis_Contig720:123820..133057- (Pylaiella littoralis U1_48)
ATGAAGGTTTCCAACCGCTGGCTGGGTCTCCTCGGTGCAGTAGCCGCCAC
GTCTCTGATGGGCGTTACTGCTACCTCGTCGTCCATCACAACGTGCGATG
ACGACAGCATTGGAAATGGCTTTTGTGACATGGGCAACAACAACCGAGTC
TGCGGTTACGATGGGGGTGATTGCTGTAAGTGCACTTGCGTGGACATCCC
CGGCACAGGCACTTCCCCAGATACCATATGCGGGCAGTATTCCGGCTTCG
CCTGCATCGACCCTGAGGCGTATTGCGTGGACGACGACGATGTTATAGTC
GCTGACATCAACGTTGTGTTTCCTGACCTCGTCGGAGATGGCTTCTGCGA
CGAAAGCAACAACAAACCGGAACAGAATTACGATGGCGGTGATTGCTGCG
AGTGCACCTGCAAGACCGACTTCGAGTTCTACTGCCGTGCTTTCGATTGC
ATCGACCCTGAAGCTTGGTGTGCGGATGACGACATCATCACTGCGTCGAT
GTCGTACGAGTTCATATATTGGGAGCAGGACTCTAGCTACCGGTTCTCGT
ACCCAATGTAG