prot_P-littoralis_Contig72.99.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig72.99.1
Unique Nameprot_P-littoralis_Contig72.99.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length102
Homology
BLAST of mRNA_P-littoralis_Contig72.99.1 vs. uniprot
Match: D8LEA7_ECTSI (FHA-HIT protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEA7_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 6.470e-14
Identity = 40/94 (42.55%), Postives = 50/94 (53.19%), Query Frame = 0
Query:    1 MRKVYHWNSFTTDFFLETSCVEARLEEHGTLDLGAERLHSLEFGPPRCFKCGLKLAESVDPNSKMGISKTMRTIKSHYRACAEPLPQPAAVGSG 94
            + K  HWNSFTTDFFL+ S VEARL E G+L L  ERL +LE  P RCF+C   +               M  +K H   C  P+P+  + G G
Sbjct:  399 LTKRKHWNSFTTDFFLDASWVEARLLERGSLGLDKERLKALEATPLRCFRCHSPMTN-------------MTKLKEHLLGCNLPVPKKNSCGGG 479          
BLAST of mRNA_P-littoralis_Contig72.99.1 vs. uniprot
Match: D7G951_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G951_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 1.990e-12
Identity = 40/101 (39.60%), Postives = 53/101 (52.48%), Query Frame = 0
Query:    1 MRKVYHWNSFTTDFFLETSCVEARLEEHGTLDLGAERLHSLEFGPPRCFKCGLKLAESVDPNSKMGISKTMRTIKSHYRACAEPLP-----QPAAVGSGQG 96
            +++  HWNSFTTD FLE S VE RLEE G+L L       LE    RCF+C        +P  +      M ++K+H RAC  P+P      PAA+   +G
Sbjct:  196 LKRKTHWNSFTTDLFLEASWVERRLEERGSLGLDMRNFRELEHVKLRCFRC------PGEPEFRH-----MESLKAHNRACTAPVPAGGRHDPAALDVRRG 285          
BLAST of mRNA_P-littoralis_Contig72.99.1 vs. uniprot
Match: A0A6H5K130_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K130_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 2.080e-12
Identity = 40/101 (39.60%), Postives = 55/101 (54.46%), Query Frame = 0
Query:    1 MRKVYHWNSFTTDFFLETSCVEARLEEHGTLDLGAERLHSLEFGPPRCFKCGLKLAESVDPNSKMGISKTMRTIKSHYRACAEPLP-----QPAAVGSGQG 96
            +++  HWNSFTTD FLETS VE RLEE G++ L  E    LE    RCF+C        +P  +      + ++K+H RAC  P+P      PAA+   +G
Sbjct:   21 LKRKTHWNSFTTDLFLETSWVERRLEERGSIGLDME----LEHVKLRCFRC------PGEPEFR-----DLESLKAHNRACTAPVPAAGRHDPAALDVRRG 106          
BLAST of mRNA_P-littoralis_Contig72.99.1 vs. uniprot
Match: UPI001FB10A37 (transcription factor bHLH140 isoform X1 n=2 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB10A37)

HSP 1 Score: 53.1 bits (126), Expect = 6.500e-6
Identity = 32/82 (39.02%), Postives = 42/82 (51.22%), Query Frame = 0
Query:    6 HWNSFTTDFFLETSCVEARLEEHGTLDL-GAERLHSLEFGPPRCFKCGLKLAESVDPNSKMGISKTMRTIKSHYRACAEPLP 86
            HWNSF +DFFL++  V A +EEHG   L   E+L S+E    RC +C      SV PN        +  +K+H   C  P P
Sbjct:  632 HWNSFNSDFFLDSVDVIAEIEEHGQTTLKDVEKLLSMEL---RCHRC-----RSVHPN--------IPRLKTHIANCQAPFP 697          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.99.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEA7_ECTSI6.470e-1442.55FHA-HIT protein n=1 Tax=Ectocarpus siliculosus Tax... [more]
D7G951_ECTSI1.990e-1239.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K130_9PHAE2.080e-1239.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001FB10A376.500e-639.02transcription factor bHLH140 isoform X1 n=2 Tax=Im... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036265HIT-like superfamilyGENE3D3.30.428.10coord: 1..84
e-value: 6.8E-7
score: 31.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:519715..521581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.99.1mRNA_P-littoralis_Contig72.99.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig72 519442..524452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig72.99.1 ID=prot_P-littoralis_Contig72.99.1|Name=mRNA_P-littoralis_Contig72.99.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=102bp
MRKVYHWNSFTTDFFLETSCVEARLEEHGTLDLGAERLHSLEFGPPRCFK
CGLKLAESVDPNSKMGISKTMRTIKSHYRACAEPLPQPAAVGSGQGACKS
M*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036265HIT-like_sf