prot_P-littoralis_Contig72.88.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig72.88.1
Unique Nameprot_P-littoralis_Contig72.88.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length359
Homology
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI)

HSP 1 Score: 531 bits (1368), Expect = 1.010e-187
Identity = 280/341 (82.11%), Postives = 296/341 (86.80%), Query Frame = 0
Query:   18 ATAPVATAVGAEEIDFAAEAQARGMTLVSSTKEEGGGVALTLDLGKGKVFTLSGVPGRGPFSVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCIAGEGDGGDDEDGSEKYEYDYGGMELVMDDEKAKRSFPTQEGGSVFEDTDISQMLGGKAGARAGGKSDASSCTNTRLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFSDCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHKWAISDP 358
            A AP +TAVG EEIDFA EA+ RGM LVSST+EE GGV LTLDLGKGKVFTLSGVPGRGPF VSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCI+GE                        DDEKAKRSFPTQEGGSVFEDTDISQML GKA + AG KS A+S  NTRLMRDLSRLMRSDT+KLGFSLQLK+DDAL+EWNINLFGFSDCPLA+DM RLEK+K LDH+RL MKFKDDYPF+PPFV IVYPRFKR TGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDF++TSVTQPYSEDRAKAAFRSAA+IHKWAISDP
Sbjct:   15 AAAPKSTAVGTEEIDFAVEAENRGMKLVSSTREENGGVVLTLDLGKGKVFTLSGVPGRGPFCVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCISGEXXXXXXXXXXXXXXXXXXXXXXXXDDEKAKRSFPTQEGGSVFEDTDISQMLSGKAKSGAGAKSKAASA-NTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFDATSVTQPYSEDRAKAAFRSAAKIHKWAISDP 354          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA)

HSP 1 Score: 267 bits (682), Expect = 2.620e-84
Identity = 150/299 (50.17%), Postives = 193/299 (64.55%), Query Frame = 0
Query:   67 FTLSGVPGRGPFSVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCIAGEG-DGGDDEDGSEKYEYDYGGMELVMDDEKA----KRSFPTQEGGSVFEDTDISQMLGGKAGARAGGKSDASSCT-----NTRLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFSDCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHKWAI 355
            FT+   PG G F+ ST   FL D L++ENLEE  + A  ++ V+  A  VY CIAG   D G D +   +Y+ D G M+ V D E A    +++    +    +ED D   ++GG A            CT     NTRLMRDLSRLMR+DT  LGF+L+L  DD L  W + +FGF+DCPLA+DM +L+K+++L+HI L MKF +DYP++PPF R+VYPRF R TGYI+DGAFC ELLT QGWTPTNDIE+V+VQ+R  MV G ARIDFN T+   PY E  +  AFR AA+ H WAI
Sbjct:   29 FTIKKAPGSG-FTCSTRDDFLGDNLWLENLEEAVSVANGVETVLKEALGVYKCIAGPASDKGSDGESDYEYQEDMG-MDNVDDTELAAKYAEKAVSANKATGTWEDRDEVPLIGGYA------------CTYVCIANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQGWTPTNDIETVIVQLRFLMVFGHARIDFNETT---PYCERNSLNAFRGAAKQHNWAI 310          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK)

HSP 1 Score: 229 bits (584), Expect = 3.830e-70
Identity = 125/282 (44.33%), Postives = 183/282 (64.89%), Query Frame = 0
Query:   75 RGPFSVSTVHPFLLDGLFVENLEEIQAQARRIQEVMSAAAEVYMCIAGEGDGGDDEDGSEKYEYDYGGMELVMDDEKAKRSFPTQEGGSVFEDTDISQMLGGKAGARAGGKSDASSCTNTRLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFSDCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHKWAI 355
            +  FSV T   FLLD  F+EN+E+  ++A  ++EV+ A ++ Y  I    + GD+   +E  EYDYG  E    D KA+   PT++  +  +  D+++ +GG  GA AG         N RLM DL+++MR+DT  LGFSL+ K++D+++ W   LF F DC LA+D+ +L++ K +D + L ++FK DYPF+PPF+R+VYPRFK  TG++ I G+ CMELLTN GWTPTNDIES+++QIR++M+ G ARI+F       PY E  A++AF   A  H W+I
Sbjct:    5 QSSFSVETSDEFLLDNFFLENIEDAVSEATAVEEVLCAISDTYKDITSGNEEGDNS-ANEDEEYDYGSDE----DFKAEPP-PTKDRATKDDWRDVAE-IGGGHGATAG---------NKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKDIDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTNSGWTPTNDIESILIQIRSEMIAGDARIEFRHD---YPYDEAEARSAFTRVASQHGWSI 267          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS)

HSP 1 Score: 151 bits (381), Expect = 1.800e-37
Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 0
Query:  195 RLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS-DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHK 352
            RL  DL ++M +DT++ GFSL+  D+D++++W I LFGF  D  LAKD+  +     +DH+ L M F DDYPF PPFVR+V PRFKR TG++++GA CMELLT  GW P NDIESV+V IR+ MVVG  R+     +V  P  ED  K A  +A E  K
Sbjct:  325 RLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLMVVG----MDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSIRSLMVVGDGRLQ---AAVDMP--EDAYKTALDAAMERSK 474          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A6B2LKV9_9EUKA (UBC core domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LKV9_9EUKA)

HSP 1 Score: 139 bits (351), Expect = 1.290e-36
Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = 0
Query:  196 LMRDLSRLMRSDTEKLGFSLQLKDDDALN-----EWNINLFGFSDCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHKWAI 355
            +++DL  + R D++ LGF+ + + D A N      W + L+   D PL  D+   +K   +D++ L M+F + YPFTPPFVR+V PRF+  TG++ I G+ CMELLTN GW  TNDIES+++QIRA+M  G AR+D N+    Q YSE  A  AF  AA  H W I
Sbjct:    1 MIKDLKSIKREDSKALGFTAEPRIDPAKNLENLYHWIVKLY--FDGPLGTDLQASQKKFGIDYVELEMRFSEHYPFTPPFVRVVRPRFQFRTGHVTIGGSICMELLTNSGWRSTNDIESILIQIRAEMQGGNARLDLNAG---QSYSEHEAWDAFNRAAGAHGWDI 161          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A7S1ZF53_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF53_TRICV)

HSP 1 Score: 141 bits (355), Expect = 4.270e-36
Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 0
Query:  195 RLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS-DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 324
            RL  DL ++M +DT++ GF ++ K +D+L+ W++ LF F  D  L+KD+A L     +D + L M F D YPF PPFVR+V PRFKR TG++++GA CMELLT++GW P NDIESV+V IR+ +VVG  R+
Sbjct:   15 RLAADLYKIMMADTDEAGFKIEPKSEDSLDRWSVRLFAFDEDSNLSKDLAVLG----IDAVELEMSFPDQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWNPVNDIESVIVSIRSLLVVGDGRL 141          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: D2VWX2_NAEGR (UBC core domain-containing protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VWX2_NAEGR)

HSP 1 Score: 142 bits (358), Expect = 7.420e-36
Identity = 96/274 (35.04%), Postives = 148/274 (54.01%), Query Frame = 0
Query:   89 DGLFVENLEEIQAQARR-----IQEVMSAAAEVYMCIAGEGDGGDDEDGSEKYEYDYGGMELVMDDEKAKRSFPTQEGGSVFEDTDISQMLGGKAGARAGGKSDASSCTNTRLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS---DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYI-IDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEIHKW 353
            D  FV++L +     +R     +Q+  +   EV   + G+ DGGD+E   E+ E D G     MDD+  +       GG   E  ++ +      GA  G       C N  +M++  ++ +++TEK G S    +DD L  W I  F F    D  +AKD+   +K   +D+I L + F  ++PF PPF+R++ PRF   TG++ I G+ CMELLT+ GW+    +ES+ VQIR++MV G+A++DF++TS   PYSE  AK AF   A+ + W
Sbjct:   71 DVKFVKSLSDYCGSGKRSLTDILQKATALYKEVESALLGDEDGGDEE--PEEVEIDIGDD---MDDDPIQPVTHQSSGGYDPEFEEMKKKFKKPTGASEG-------CVNC-IMKEYMKIKQANTEKFGISANPVNDD-LFHWEIRFFNFDIKEDGKIAKDLQEYKKKNGIDYITLDLTFPLEFPFKPPFIRVLKPRFAFRTGHVTIGGSICMELLTSSGWSSVCSLESIFVQIRSEMVAGEAQLDFSNTS---PYSEHEAKEAFFRVAQRYGW 327          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: K0RZ81_THAOC (UBC core domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ81_THAOC)

HSP 1 Score: 145 bits (365), Expect = 1.120e-35
Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 0
Query:  195 RLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS-DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 324
            RL  DL ++M +DT++ GFSL+  D+D++++W INLFGF  D  LAKD+     D     + L M F DDYPF PPFVR+V PRF+R TG+++ GA CMELLT+ GW P NDIESV+V IR+ MVVG  R+
Sbjct:  250 RLASDLYKIMMADTKEAGFSLEPVDEDSMDKWRINLFGFDEDSNLAKDLMVCGTDS----VELQMSFPDDYPFKPPFVRVVKPRFQRQTGFVMSGALCMELLTSDGWNPVNDIESVIVSIRSLMVVGNGRL 376          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO)

HSP 1 Score: 142 bits (358), Expect = 1.330e-35
Identity = 72/132 (54.55%), Postives = 88/132 (66.67%), Query Frame = 0
Query:  195 RLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS-DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARID 325
            RL +DL R+M  DT + GFSL    +D++  W I LF F  D  LAKDM  L     +DHI L M F D YPF PPFVR+V PRFKR TG+++ GA CMELLT  GW P NDIESV+V IR+ +VVG  R++
Sbjct:  159 RLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMKVLG----IDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWNPVNDIESVIVSIRSLLVVGDGRLE 286          
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Match: A0A448Z8A8_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8A8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.690e-35
Identity = 71/131 (54.20%), Postives = 93/131 (70.99%), Query Frame = 0
Query:  195 RLMRDLSRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFS-DCPLAKDMARLEKDKQLDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGWTPTNDIESVVVQIRAQMVVGKARI 324
            RL +DL R+M  DTE+ GFSL  + +D++ +W I LF F  D  LAKDM  +     +DHI+L MKF + YPF PPFVR+V PRFKR TG++++GA CMELLT  GW P NDIESV+V +R+ +VVG  R+
Sbjct:  270 RLAQDLYRIMNQDTEEAGFSLAPQTEDSMEKWTIKLFQFDPDSNLAKDMLVVG----IDHIKLEMKFPEQYPFEPPFVRVVNPRFKRQTGFVMNGALCMELLTKDGWNPINDIESVIVSVRSLLVVGDGRL 396          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA1_ECTSI1.010e-18782.11UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBS4_9STRA2.620e-8450.17Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3XWH9_HETAK3.830e-7044.33Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8C5U5_THAPS1.800e-3750.94UBC core domain-containing protein n=1 Tax=Thalass... [more]
A0A6B2LKV9_9EUKA1.290e-3645.18UBC core domain-containing protein n=1 Tax=Arcella... [more]
A0A7S1ZF53_TRICV4.270e-3651.15Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
D2VWX2_NAEGR7.420e-3635.04UBC core domain-containing protein n=1 Tax=Naegler... [more]
K0RZ81_THAOC1.120e-3554.20UBC core domain-containing protein n=1 Tax=Thalass... [more]
A0A1Z5K8B1_FISSO1.330e-3554.55Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulif... [more]
A0A448Z8A8_9STRA1.690e-3554.20UBC core domain-containing protein n=1 Tax=Pseudo-... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..116
NoneNo IPR availableSMARTSM00212ubc_7coord: 194..355
e-value: 7.9E-4
score: 18.1
NoneNo IPR availablePANTHERPTHR24068:SF350UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEINcoord: 185..353
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 185..353
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 195..317
e-value: 2.4E-10
score: 40.2
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 191..357
score: 17.449654
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 187..354
e-value: 5.3E-38
score: 132.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 189..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:454035..462114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.88.1mRNA_P-littoralis_Contig72.88.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig72 453807..463736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig72.88.1 ID=prot_P-littoralis_Contig72.88.1|Name=mRNA_P-littoralis_Contig72.88.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=359bp
MAALTTSGAEAAAAAVTATAPVATAVGAEEIDFAAEAQARGMTLVSSTKE
EGGGVALTLDLGKGKVFTLSGVPGRGPFSVSTVHPFLLDGLFVENLEEIQ
AQARRIQEVMSAAAEVYMCIAGEGDGGDDEDGSEKYEYDYGGMELVMDDE
KAKRSFPTQEGGSVFEDTDISQMLGGKAGARAGGKSDASSCTNTRLMRDL
SRLMRSDTEKLGFSLQLKDDDALNEWNINLFGFSDCPLAKDMARLEKDKQ
LDHIRLTMKFKDDYPFTPPFVRIVYPRFKRGTGYIIDGAFCMELLTNQGW
TPTNDIESVVVQIRAQMVVGKARIDFNSTSVTQPYSEDRAKAAFRSAAEI
HKWAISDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD