prot_P-littoralis_Contig72.81.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig72.81.1
Unique Nameprot_P-littoralis_Contig72.81.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length237
Homology
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 210 bits (534), Expect = 1.130e-63
Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = 0
Query:   18 HFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEA 217
            +F GK+ ++ FT +    RNSRNRAAGT+ TKCVEVTK+ +K K+++ V PAIK +WP   R RTIYIQ DN    R+N   D++ A  + G+DI+LINQP NS DTNILDLGFF ++QSLQDR   RT+D+ I+EV+ A+    P+   KVW SLQA ++  ++L  G NT+KLPHL KD AA +G  IP+ LP+S EA
Sbjct:   87 NFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGG-RGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ--IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN)

HSP 1 Score: 195 bits (495), Expect = 1.970e-57
Identity = 107/222 (48.20%), Postives = 140/222 (63.06%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 221
            M +AAVARP ++      FDGKI +WAF EE    R S+NR  GT+V + VE V ++ YKA LI  +IPAIK KWP + + RTIYIQQDNAKP    D  D++ A  SGG+DI++  QPPNS D N+LDLG+F SIQSLQ +T  R ++ L+  V +A++A     L K++ +LQ CME I    GG N YK PH GKD   + G  +P     S E + +G
Sbjct:  109 MFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDTVNSAFSAMKADTLSKIFMTLQTCMECITRANGGNN-YKTPHRGKDALKKTGQ-LPVSFACSAEVYHQG 328          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 7.930e-57
Identity = 107/228 (46.93%), Postives = 143/228 (62.72%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKGTAAAGQQ 228
            M ++AVARP  N   +  FDGKI  W FTE VP  RNSRNR +GT+VT  V V++DTY+  L+  VIPAIK KWP A R   I IQQDNA+P      + +L AC + G+DI +  QPPNS D N+LDLGFF +IQSLQ+RTR RTID+LI+   +AW + D + L   + +LQ+CM + +   GG N YK+PH+ K    + G  +P  +    + +  G A  G +
Sbjct:  203 MFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWPDA-RTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIR-SGGNNNYKVPHMKKAPMMKQGR-LPDAIECPRDVFDHGLALMGNE 427          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 195 bits (495), Expect = 2.100e-56
Identity = 107/222 (48.20%), Postives = 141/222 (63.51%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVE-VTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIKG 221
            M +AAVARP ++      FDGKI +WAF EE    R S+NR  GT+V + VE V ++ YKA  I  +IPAIK KWP + + RTIYIQQDNAKP    D  D++ A  SGG+DI++  QPPNS D N+LDLG+F SIQSLQ +T  R ++ L+  V +A++A     L K++ +LQ CME I+   GG N YK PH GKD   +AG  +P     S E + +G
Sbjct:  205 MFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNN-YKTPHRGKDALKKAGQ-LPVSFACSAEVYDQG 424          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 192 bits (488), Expect = 5.900e-55
Identity = 100/216 (46.30%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 216
            M ++AVARP  N      FDGKI  W FTE+V   R SRNR AGT+ T+ V VT+  YKA LI+ VIP IK KWP++   R + IQQDNA+P        +++AC SGG++++++ QPPNS D NILDLGFF +IQSLQ++  +R ID +I+  + AW+    + L   + +LQ CM++I+    G+N YK+PH+GK K A  G  +P  L +  E
Sbjct:  218 MFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSA-GRNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIIS-AQGDNNYKIPHMGKAKLAARGR-LPEVLSVDSE 430          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: UPI0019D5FBC2 (uncharacterized protein LOC120697786 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5FBC2)

HSP 1 Score: 185 bits (469), Expect = 2.220e-54
Identity = 98/211 (46.45%), Postives = 134/211 (63.51%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRL 211
            M + AVA+P ++   N  FDGKI +WAF  + P  R S +R  GT++TK + V +DT ++ LI  V+ AIK  WPA    RTI+IQQDNA+     D ED   A +  GFDI+LINQPPNS D N+LDLGFFAS+QS  D T +R +D+LI+ VE  +   D   L  V+ +LQ C+ +++   GGEN YK+PH+ K++    G  +PR L
Sbjct:   59 MFLTAVAKPRYDNEGNCTFDGKIGIWAFIRKEPAKRRSGSRPRGTLITKTITVDRDTMRSYLIGKVLWAIKTHWPAEDAGRTIWIQQDNARTHVPVDDEDFARAAAQTGFDIRLINQPPNSPDMNVLDLGFFASLQSKTDTTTSRNLDELIANVENEFRNYDVNDLRNVFLTLQGCLIEVMK-AGGENKYKIPHMNKERLEALGL-LPRSL 267          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: Q2QUD8_ORYSJ (Transposon protein, putative, Mariner sub-class n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q2QUD8_ORYSJ)

HSP 1 Score: 188 bits (477), Expect = 2.360e-54
Identity = 102/220 (46.36%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEEAWIK 220
            M +AAVARP +N      FDGKI LW FT++ P  R S+NR  GT+VTK ++V +DT ++ LI  V+PAI   WP   RH TI+IQQDNA      D      A S  GFDI+L+ QPPNS+D N LDLGFFAS+QSL  R  +R ID+LI  VE  + A D  KL +V+ +LQ+C+ +++ + GG N Y++PH+GK++  R    +P  L    + + K
Sbjct:  162 MFLAAVARPRYNEEGICTFDGKIGLWPFTKKEPAQRASQNRPRGTLVTKTIKVDRDTVRSFLIAKVLPAIISSWPREERHNTIWIQQDNAPSHVPVDDPQFAYAVSQTGFDIRLMYQPPNSTDMNALDLGFFASLQSLTYRRISRNIDELIDNVEQEFQAYDDNKLNRVFLTLQSCLLEVMEVDGG-NGYRIPHMGKERLERLDI-LPNTLSCGRQLYDK 379          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A6A4Z2B2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z2B2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 3.860e-54
Identity = 99/216 (45.83%), Postives = 139/216 (64.35%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPISEE 216
            M ++AVARP  + A    FDGK+  W FT +VP  R SRNR AGT+VT  V VT+  YKA L++ VIPAIK KWP+ T  + I IQQDNA+P       D++ AC+S G+ +++  QPPNS D NILDLGFF +IQSLQ +  +R ID ++S  E AW   + A L   + +LQ C+++++ + GG N YK+PH+ K   A  G  +P+ +P+  +
Sbjct:  228 MFLSAVARPRWDSAKGELFDGKLGTWHFTTKVPAARGSRNRPAGTLVTSPVSVTRSVYKAMLLDHVIPAIKRKWPS-TESKKITIQQDNARPHIPPRDHDIVAACTSDGWAMEVKYQPPNSPDMNILDLGFFRAIQSLQVKNHSRCIDDIVSATEQAWIDVESATLNANFLTLQCCLQEVVRM-GGNNNYKIPHMKKAALAARGM-LPQVVPVESD 440          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: A0A024U573_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U573_9STRA)

HSP 1 Score: 186 bits (473), Expect = 7.830e-54
Identity = 100/214 (46.73%), Postives = 136/214 (63.55%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARAGTPIPRRLPIS 214
            M ++AVARP  N      FDGKI  W FTE VP  R+SRNR AGT+VT  V VT+  YK  L++ VIPAIK KWP     R +++QQD AKP      +D++EACSSGG+ ++L  QPPNS D N+LDLGFF SIQ++Q+   +R++D +I+  + AW   D   L   + +LQ CM +I+   G  N+YK+PH+ K+  + +G     RLP S
Sbjct:  100 MFLSAVARPRWNDESGEWFDGKIGTWHFTELVPAERSSRNRPAGTLVTTPVAVTRPVYKDMLVKHVIPAIKTKWPKGASRR-VFLQQDFAKPHVAPTDDDIIEACSSGGWAMELKFQPPNSPDLNVLDLGFFRSIQTIQEENFSRSVDDIIAATDNAWRRVDMMTLNSNFLTLQCCMLEIIRFAGC-NSYKIPHMRKNVLSASG-----RLPES 306          
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.040e-53
Identity = 96/203 (47.29%), Postives = 132/203 (65.02%), Query Frame = 0
Query:    1 MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKCVEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHEDLLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQLISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKAARA 203
            M ++AVARP  N   N  FDG+I  W FT+ VP  R+SRNR +GT+VT    VT+DTY+  LI+ VIPAIK KWP     R I +QQDNA+P      E +  AC+S G+ I+++ QPPNS D N+LDLGFF +IQ+LQ+RTR +TID+LI    +AW   D   L   + +LQ C+ +++   GG N YK+P  G+++  +A
Sbjct:  128 MFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAAR-ILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMNVLDLGFFRAIQTLQERTRCKTIDELIDATLSAWTTVDAMTLNSNFLTLQTCLIEVVR-AGGGNNYKIPPHGQEEVGQA 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.81.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGY9_9PHAE1.130e-6353.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W2QAD0_PHYPN1.970e-5748.20Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A485KBU5_9STRA7.930e-5746.93Aste57867_2438 protein n=2 Tax=Aphanomyces stellat... [more]
W2NW41_PHYPR2.100e-5648.20HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]
A0A6A4YXI9_9STRA5.900e-5546.30Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0019D5FBC22.220e-5446.45uncharacterized protein LOC120697786 n=1 Tax=Panic... [more]
Q2QUD8_ORYSJ2.360e-5446.36Transposon protein, putative, Mariner sub-class n=... [more]
A0A6A4Z2B2_9STRA3.860e-5445.83Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A024U573_9STRA7.830e-5446.73Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GP40_9STRA2.040e-5347.29Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 3..187
e-value: 5.7E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 1..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:400391..401101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.81.1mRNA_P-littoralis_Contig72.81.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig72 399677..401101 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig72.81.1 ID=prot_P-littoralis_Contig72.81.1|Name=mRNA_P-littoralis_Contig72.81.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=237bp
MCVAAVARPHHNPAINSHFDGKIRLWAFTEEVPDMRNSRNRAAGTVVTKC
VEVTKDTYKAKLIEGVIPAIKEKWPAATRHRTIYIQQDNAKPRRVNDHED
LLEACSSGGFDIQLINQPPNSSDTNILDLGFFASIQSLQDRTRARTIDQL
ISEVEAAWAAADPAKLGKVWTSLQACMEQILLLCGGENTYKLPHLGKDKA
ARAGTPIPRRLPISEEAWIKGTAAAGQQGAAAGGHGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf