prot_P-littoralis_Contig72.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig72.61.1
Unique Nameprot_P-littoralis_Contig72.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length104
Homology
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BLAST of mRNA_P-littoralis_Contig72.61.1 vs. uniprot
Match: A0A6H5L0C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C2_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 6.270e-15
Identity = 51/109 (46.79%), Postives = 64/109 (58.72%), Query Frame = 0 
Query:    2 GASESG-TAGPGGVS--EEQDDGDFFVMKPSEEHG----EVALASLLGVWRVFQSQGYPYYLHEDSGHSQWEDPRDRKTVRPREPSTTAAADIAADVGYGSDRRSEAKG 103
            G S SG TAG   V   E + +GD FVM  S+E G      A A+L G+W+VFQS+GYPYYLHE SGH+QWEDPR+ + +R +E           D G   D R E+ G
Sbjct: 1045 GTSRSGATAGQEAVEFEESEKEGDSFVMVVSQEMGGRQTRDASAALAGLWKVFQSEGYPYYLHEASGHTQWEDPREVERLRVQE--------FLVDTGATGDVRGESLG 1145
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0C2_9PHAE6.270e-1546.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 39..70
e-value: 0.0013
score: 28.0
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 44..68
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 38..70
score: 9.4578
IPR001202WW domainCDDcd00201WWcoord: 44..70
e-value: 7.54012E-5
score: 35.1962
NoneNo IPR availableGENE3D2.20.70.10coord: 44..69
e-value: 1.5E-5
score: 26.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..77
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 37..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:309766..310077 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.61.1mRNA_P-littoralis_Contig72.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig72 309766..310077 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig72.61.1 ID=prot_P-littoralis_Contig72.61.1|Name=mRNA_P-littoralis_Contig72.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=104bp
VGASESGTAGPGGVSEEQDDGDFFVMKPSEEHGEVALASLLGVWRVFQSQ
GYPYYLHEDSGHSQWEDPRDRKTVRPREPSTTAAADIAADVGYGSDRRSE
AKGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf