prot_P-littoralis_Contig72.58.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig72.58.1
Unique Name	prot_P-littoralis_Contig72.58.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	101

Homology

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: D8LE80_ECTSI (60S ribosomal protein L41 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE80_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 8.180e-46
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVKTL GASLPLEVSPATSITAVKAAVEAQ+FLP ALMRLNHG  QL+SGCLADAGIEEADTLTLLLDV+GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKTLGGASLPLEVSPATSITAVKAAVEAQEFLPAALMRLNHGNAQLSSGCLADAGIEEADTLTLLLDVRGGMRAKWRKKRXXXXXXXXXXXRQRAR 100

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A836CFJ6_9STRA (60S ribosomal protein L41 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ6_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.680e-25
Identity = 72/101 (71.29%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGC-LADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVKTLA  SL L+V+P +++  V A VE ++FLP AL RL+ G+TQL S   L  AGIEEADTLTLLL V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKTLARDSLVLDVAPTSTVGDVMAMVEDREFLPAALQRLSCGSTQLASTTTLEAAGIEEADTLTLLLSVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 101

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7S4DB66_HETAK (60S ribosomal protein L41 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB66_HETAK)

HSP 1 Score: 81.3 bits (199), Expect = 5.730e-18
Identity = 61/100 (61.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFVK  +G S    VS   S+    A VE Q FLP  L+R    + QLT+G LAD G+EE  T+++LL V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVKDPSGRSTAYTVSKDASVEGFNAQVENQTFLPADLVRFVCESKQLTTGSLADFGVEEGVTISMLLHVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 100

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7S2HF29_9STRA (60S ribosomal protein L41 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF29_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.730e-18
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIF+    G S    V    S+ +VKA +E ++F+P  L+RL +G T L  G L   G++E DT+T+LL+V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:    1 MQIFIAGAQGPSTAYTVDSDASVESVKAMIENREFVPSELIRLVNGATALEGGSLLGNGVQEDDTITMLLEVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 100

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7S0KA44_9STRA (60S ribosomal protein L41 n=2 Tax=Leptocylindrus TaxID=163515 RepID=A0A7S0KA44_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.370e-17
Identity = 61/101 (60.40%), Postives = 72/101 (71.29%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRL-NHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIFV    G++   EV   TS+ ++K  VE Q F+P  L RL +  +T LT G LA  GIEE DT+TL+LDV+GGMR KWRKK XXXXXXXXXXXRQRAR
Sbjct:    1 MQIFVSYPQGSTRAYEVDSDTSVESLKLMVENQTFIPSGLCRLVDANSTTLTGGSLAAMGIEEDDTVTLMLDVEGGMRRKWRKKXXXXXXXXXXXXRQRAR 101

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A6A4FFT9_9STRA (60S ribosomal protein L41 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FFT9_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.320e-16
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQ+FV+TL+G+ L L V+   S+ +VK AVE  +++P    RL     QLTSG LAD  + E DTL +LLDV GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:  831 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPN--FRLVCAGKQLTSGSLADYAVGECDTLKMLLDVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 928

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7S4T8Y9_9STRA (60S ribosomal protein L41 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8Y9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.370e-16
Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIF+    G S    V    SI +VKA +E ++F+P  L+RL +G + L  G L   G++E DT+T+LL+V GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:   89 MQIFIAGAQGPSTAYTVDSDASIESVKAMIENKEFVPADLIRLVNGASVLEGGSLLGNGVQEDDTITMLLEVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 188

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7R9WJP8_9STRA (60S ribosomal protein L41 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJP8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.170e-16
Identity = 56/100 (56.00%), Postives = 73/100 (73.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQIF+ + A A     V  A SI +VKA +E ++F+P  L+RL +G T L  G LA  G+E+ DT+T++L+V+GGMR KW+KKR XXXXXXXXXXRQRAR
Sbjct:   25 MQIFIGSTAYA-----VDAADSIESVKAQIENREFVPAHLIRLVNGATPLEGGTLAGNGVEDEDTITMMLEVQGGMRRKWKKKRMXXXXXXXXXXRQRAR 119

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A6G0NVC9_9STRA (60S ribosomal protein L41 n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NVC9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.330e-16
Identity = 62/100 (62.00%), Postives = 74/100 (74.00%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRXXXXXXXXXXXRQRAR 100
            MQ+FV+TL+G+ L L V+   S+ +VK AVE  +++P    RL     QLTSG LAD  + E DTL +LLDV GGMRAKWRKKRXXXXXXXXXXXRQRAR
Sbjct:  710 MQLFVETLSGSPLTLSVAADASVASVKQAVEDVEYIPN--FRLVCAGKQLTSGSLADYVVGECDTLKMLLDVNGGMRAKWRKKRXXXXXXXXXXXRQRAR 807

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BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Match: A0A7S3Y2M4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2M4_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 4.700e-16
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0

Query:    1 MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQLTSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKR 84
            MQIFVK  +G S    VS   S+    A VE Q FLP  L+R    + QLT+G LAD G+EE  T+++LL V GGMRAKWRKKR
Sbjct:    1 MQIFVKDPSGRSTAYTVSKDASVEGFNAQVENQTFLPADLVRFVCESKQLTTGSLADFGVEEGVTISMLLHVNGGMRAKWRKKR 84

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig72.58.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LE80_ECTSI	8.180e-46	93.00	60S ribosomal protein L41 n=2 Tax=Ectocarpus TaxID...	[more]
A0A836CFJ6_9STRA	8.680e-25	71.29	60S ribosomal protein L41 n=1 Tax=Tribonema minus ...	[more]
A0A7S4DB66_HETAK	5.730e-18	61.00	60S ribosomal protein L41 n=1 Tax=Heterosigma akas...	[more]
A0A7S2HF29_9STRA	5.730e-18	57.00	60S ribosomal protein L41 n=1 Tax=Helicotheca tame...	[more]
A0A7S0KA44_9STRA	3.370e-17	60.40	60S ribosomal protein L41 n=2 Tax=Leptocylindrus T...	[more]
A0A6A4FFT9_9STRA	1.320e-16	62.00	60S ribosomal protein L41 n=9 Tax=Phytophthora Tax...	[more]
A0A7S4T8Y9_9STRA	1.370e-16	57.00	60S ribosomal protein L41 n=3 Tax=Ditylum brightwe...	[more]
A0A7R9WJP8_9STRA	2.170e-16	56.00	60S ribosomal protein L41 n=1 Tax=Pseudictyota dub...	[more]
A0A6G0NVC9_9STRA	3.330e-16	62.00	60S ribosomal protein L41 n=1 Tax=Phytophthora fra...	[more]
A0A7S3Y2M4_HETAK	4.700e-16	53.57	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..71 e-value: 1.4E-4 score: 31.2
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..71 e-value: 4.1E-7 score: 29.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..75 score: 13.576172
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 2.8E-16 score: 61.0
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..97
None	No IPR available	PANTHER	PTHR10666:SF258	UBIQUITIN-40S RIBOSOMAL PROTEIN S27A	coord: 1..97
IPR007836	Ribosomal protein L41	PFAM	PF05162	Ribosomal_L41	coord: 76..98 e-value: 7.3E-8 score: 32.3
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig72	contig	P-littoralis_Contig72:288658..288960 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig72.58.1	mRNA_P-littoralis_Contig72.58.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig72 288658..288960 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig72.58.1 ID=prot_P-littoralis_Contig72.58.1|Name=mRNA_P-littoralis_Contig72.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=101bp
MQIFVKTLAGASLPLEVSPATSITAVKAAVEAQDFLPVALMRLNHGTTQL
TSGCLADAGIEEADTLTLLLDVKGGMRAKWRKKRMRRLRRKRRKMRQRAR
*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin-like_dom
IPR007836	Ribosomal_L41
IPR029071	Ubiquitin-like_domsf