prot_P-littoralis_Contig72.55.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig72.55.1
Unique Nameprot_P-littoralis_Contig72.55.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length106
Homology
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A6H5L0M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M8_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 2.380e-51
Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 0
Query:   14 MAMRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSN 105
            MAMRGVGK TR+TYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTP+AEPGAAGPPGA GA+SGAAKDPDFGPAPVGYVAGRGRGMGDLAKSN
Sbjct:    1 MAMRGVGKTTRSTYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPPGAPGASSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSN 92          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A6H5KUU3_9PHAE (PRP1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU3_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.110e-20
Identity = 47/59 (79.66%), Postives = 50/59 (84.75%), Query Frame = 0
Query:   30 GAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPV 88
            GAPSN+VAGLGRGAVGFT RSDIGPART IAE GA GP GA GA+ G +KDPDFGP PV
Sbjct:   16 GAPSNHVAGLGRGAVGFTNRSDIGPARTTIAELGATGPRGATGASCGVSKDPDFGPVPV 74          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A7S0XAM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XAM5_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 4.070e-18
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGMGDLAKS 104
            M GVG ++ +T++  APS YVAG+GRGAVGFTTRSDIGPAR        A   G           P+FG APVGYVAGRGRGMG+LAKS
Sbjct:    1 MSGVGPKSVSTFSTTAPSYYVAGIGRGAVGFTTRSDIGPARPAFDPTNPAASTGLLPTVVNPFVTPNFGQAPVGYVAGRGRGMGELAKS 89          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.530e-17
Identity = 51/85 (60.00%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   19 VGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGMGDLAK 103
            VG ++  TY    PSNYVAG+GRGA+GFTTRSDIGPAR          PP           DP FGPAPVGYVAGRGRGMGDLA+
Sbjct:    1 VGPRSANTYTVAPPSNYVAGVGRGAMGFTTRSDIGPARP--------APPMGGAXXXXXXPDP-FGPAPVGYVAGRGRGMGDLAR 76          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.630e-15
Identity = 47/91 (51.65%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNS 106
            M G G Q   TY+ GAP  Y AG GRGA+GFTTRSDIGPAR+ + E                    +FG  P GYVAGRGRGMGDLA+S +
Sbjct:    1 MSGRGVQRLKTYDKGAPQGYQAGFGRGAIGFTTRSDIGPARSSVPEV-------------------NFGQPPPGYVAGRGRGMGDLARSQA 72          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A7S4D952_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D952_HETAK)

HSP 1 Score: 75.5 bits (184), Expect = 1.470e-14
Identity = 51/89 (57.30%), Postives = 55/89 (61.80%), Query Frame = 0
Query:   18 GVGKQTRATY-NAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDP--DFGPAPVGYVAGRGRGMGDLAK 103
            GVG +T  T+ N   PSNYVAGLGRGAVGFTTRSDIGPART   + GAA            A+ P  DFG A  GYVAG GRG   L K
Sbjct:    3 GVGARTANTFGNVAVPSNYVAGLGRGAVGFTTRSDIGPARTAAPQSGAA-----------PAQPPVADFGAAXXGYVAGAGRGASILGK 80          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A5D6YDN0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDN0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.820e-13
Identity = 48/82 (58.54%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRG 97
            M G+G++ R TY +GAP+NYV GLGRGAVGFTTRSDIGPAR+P+   G A   GA  A    A  P   PAP    AGRGRG
Sbjct:    1 MSGLGQRLRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARSPLTPEGLAADGGALRAAPTTAGPPGP-PAPFLPGAGRGRG 81          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 72.4 bits (176), Expect = 1.330e-12
Identity = 45/83 (54.22%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGM 98
            M G+G++ R TY +GAP+NYV GLGRGAVGFTTRSDIGPAR P+A  G+  P G A         P     P    AGRGRG+
Sbjct:    1 MSGLGQRQRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMAPDGSGAPVGGA---------PGXXAPPYLPGAGRGRGV 74          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: A0A2P4Y3Q2_9STRA (Pre-mRNA-processing factor (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3Q2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.780e-11
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPG 63
            M G+G++ R TY +GAP+NYV GLGRGAVGFTTRSDIGPAR P+ + G
Sbjct:    1 MSGLGQRVRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMTQDG 48          
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Match: H3GKT1_PHYRM (PRP1_N domain-containing protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GKT1_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 2.180e-11
Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   16 MRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPIAEPG 63
            M G+G++ R TY +GAP+NYV GLGRGAVGFTTRSDIGPAR P+ + G
Sbjct:    1 MSGLGQRVRNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMTQDG 48          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig72.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0M8_9PHAE2.380e-5194.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KUU3_9PHAE1.110e-2079.66PRP1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S0XAM5_9STRA4.070e-1858.43Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S3MCI9_9STRA8.530e-1760.00Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A4D9D6Q2_9STRA2.630e-1551.65Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4D952_HETAK1.470e-1457.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5D6YDN0_9STRA3.820e-1358.54Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WCC0_GLOUD1.330e-1254.22PRP1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A2P4Y3Q2_9STRA1.780e-1168.75Pre-mRNA-processing factor (Fragment) n=1 Tax=Phyt... [more]
H3GKT1_PHYRM2.180e-1168.75PRP1_N domain-containing protein n=24 Tax=Peronosp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010491PRP1 splicing factor, N-terminalPFAMPF06424PRP1_Ncoord: 31..61
e-value: 6.2E-12
score: 46.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig72contigP-littoralis_Contig72:271903..274469 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig72.55.1mRNA_P-littoralis_Contig72.55.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig72 271903..274470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig72.55.1 ID=prot_P-littoralis_Contig72.55.1|Name=mRNA_P-littoralis_Contig72.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=106bp
STTATPTEEGAATMAMRGVGKQTRATYNAGAPSNYVAGLGRGAVGFTTRS
DIGPARTPIAEPGAAGPPGAAGATSGAAKDPDFGPAPVGYVAGRGRGMGD
LAKSNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010491PRP1_N