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Homology
BLAST of mRNA_P-littoralis_Contig718.12.1 vs. uniprot
Match: D7FWD3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD3_ECTSI) HSP 1 Score: 837 bits (2161), Expect = 4.130e-284 Identity = 573/1001 (57.24%), Postives = 647/1001 (64.64%), Query Frame = 1
Query: 538 PRSGMLCSHSAFAHKSPPAPLGDGSTGPLGGYMIQQGKPFRGGPND----FQAGGPSASGGRGAGGHGGQQASRQGRPGDRPLSVHQKFNAMVGIRQESSAREEE-TQVLDSLNDDPLLRLHFGLHVTFQAIQGENGYFMALDMESGGVSMIPLHGLRKDQQARAVTFKLIDLEDPESYRSIFYGRSVWLQIVPGQGDPTWKQGSVLGARVHGPGMLPTVVIDPNDSSTASSSMIYQSGGPSQPGTSEGASSVRRPGGTPAPGTPARKGNAQGNAPGTSSGGVRSAGAEPSCAHGGEGSARGSAG---------------------------GTGRVSSAVGGGNTDADRPVGVPCPFRAAAAKHGGPNGTANETLMRAVNKSAIVNCRWTVRPVRSDGQSIPGKDGKEVSNMDFVYFEQDFFYITRVSENSSVVLKALSHQNRSAANGGVGVTGXXXXXXXXXXXXKRGTALRRYPVGRRGVFKVQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPDDRLASGAAFAREIRVRTTRFASESESRAICSTSQSSPSRGGTRG----------AAXXXXXGGSWDTGLVSHXXXXXXXXXXXXXXXXXXXXXXLSPPVSYFPTESWGTKTLQVMTDAARAPAECGVAASHARVLRQWKQRLGRPGATPSQADDLSNGGSTIGNADSSIIYGSRNDEGEDGGDGDSGGHRVEENVSPMCPRCRYLTSNPTAPSPPTKTPAASSIDAPAASXXXXXXXXXXXXXXNVAGDVALGRYCLCTVNREIQREVLQGTASGSHARSATVDPAGTVPSAVAVAAAAAADVGAPPPANKTGGDAPNFHAPSRMSTPGSEHAAVAAAXXXXXXANGDLPLEGGRAAAGGPAPTGRPWATERHLSVGGTR----ALARAPSSS--AMAEPGLSSFTAGAFVGGAGAANGLKRARDRRADRRKKKDPFEALEERLLDGFSLESITRQLQQQDETLQKGVR 3396
PR G+L S AF K PPAPLG G + LGGY+IQQG FRGG + F A GGRG GHGGQQAS GR GDRP+S+HQKFNAMVGI++ESS+REEE TQVLDSLN DP LRLH+GLHVTFQA+QGENGYFM+LDME+GGVSMIPLH L+K+ Q VTFK+IDLEDPESYRSIFYG+ VWLQIVPG G+PTW+ GSVLGARVHGPGMLPTVVIDPND++ ASS M +Q+ S+PGTSE TP PGT R + G + G + G AR S G G GRVSSAVGGGNTDA+RPVGVP PF+AA +KHGG GTANETL+RA+NKSAIVNCRWTVRPVRSDGQS+ GKDGKEVSN+D+VY EQDFFY+TRVSEN+SVVLKALSH NRSA GXXXXXXXXX KRGTA + +PVGRRGVFK+QVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRP DRL SGAAF REIRVRTT F SES SRAI S S S P RGG + GGSWD G ++ SWGT LQ MTD ARA AE GV ASHARVLR+WKQR G G SQADD S+ G+T ++DS N EGEDGG + G + VSPMC RCRYLT++P P PP T S S XXXXXXXXXX +V LGRYCLCTVNREIQ EVLQG ASG HAR+AT +P +A++V A + P + G + A+ G+L LEG GG A+ER+ S+GG L+R PSS+ A+A G ++ +GG LKRARDRRADRRKKKDPFEALEERLLDGFSLESIT++LQQQDETLQKGVR
Sbjct: 160 PRKGLLASRGAFPSKGPPAPLGRGGSSLLGGYVIQQGGSFRGGGGEASGLFPGADGLAGGGRGTSGHGGQQAS-WGRAGDRPMSLHQKFNAMVGIQRESSSREEEGTQVLDSLNHDPSLRLHYGLHVTFQAVQGENGYFMSLDMETGGVSMIPLHELQKNNQ---VTFKMIDLEDPESYRSIFYGKPVWLQIVPGPGEPTWRDGSVLGARVHGPGMLPTVVIDPNDAAAASS-MAHQTAH-SRPGTSES---------TPGPGT-RRPVSTHGASSGRGNTGWN---------------ARDSPGXXXXXXXXXXXXXXXXXXXXXXXXEVVGAGRVSSAVGGGNTDANRPVGVPYPFKAAGSKHGGAGGTANETLLRAMNKSAIVNCRWTVRPVRSDGQSLLGKDGKEVSNLDYVYLEQDFFYMTRVSENASVVLKALSHNNRSA--------GXXXXXXXXXASGKRGTAQKHHPVGRRGVFKLQVADADELRPGEERSAALMRKAKRGLKRSEARRSGHRTYVHKQRPQDRLTSGAAFPREIRVRTTHFVSESASRAISSASHS-PHRGGGAXXXXXXXVVGYSRSGVSLGGSWD-GFGDGGGGS-----------------------AWLSAGSWGTDVLQAMTDFARAGAERGVTASHARVLREWKQRWGPLGTIWSQADDHSSRGTTGDSSDS-------NGEGEDGGGDEGHGWSL---VSPMCSRCRYLTAHPLTPPPPAGTIGTCS------SRSLSXXXXXXXXXXXDEAEVTLGRYCLCTVNREIQTEVLQGDASGGHARAATAEPG----AALSVGTEAGHEPSVSSPTAEGGXXXXXXXXXXXXXXXXXXXXXMNASEM-----GGELALEGAGRPVGG--------ASERNTSLGGGXXCGGGLSRMPSSNTLALAAGGFAAXXXXXXIGG------LKRARDRRADRRKKKDPFEALEERLLDGFSLESITKRLQQQDETLQKGVR 1057
BLAST of mRNA_P-littoralis_Contig718.12.1 vs. uniprot
Match: A0A835Z7L2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7L2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 7.380e-14 Identity = 134/471 (28.45%), Postives = 184/471 (39.07%), Query Frame = 1
Query: 931 GYFMALDMESGGVSMIPLHGLRKDQQARAVTFKLIDLEDPESYR-SIFYGRSVWLQ------------------IVPGQGDPTWKQGSVLGARVHGPGMLPTVVIDPNDSSTASSSMIYQSGG---------------PSQPGTSEGASSVRRPGGTPAPGTPARKGNAQGNAPGTSSG-----------GVRSAGAEPSCAHGGEGSARGSAGGTGRVSSAVGGGNTDADRPVGVPCPFRAAAAKHGGPNGTA-NETLMRAVNKSAIVNCRWTVRPVRSDGQSIPGKDGKEVSNMDFVYFEQDFFYITRVSENSSVVLKALSHQNRSAANGG-----------VGVTGXXXXXXXXXXXXKRGTALRRYPVGRRGVFKVQVADADEL-RPGEER-SAALMRKAKRGLKRSEARRSGHRTYVHKQR--------------------------PDDRLASGAAFAREIRVRT 2088
G +A+DM +G +PL + +F L+DLED SY+ +I G VWL I G GDP+W QGSVLGARVH PG LPT+ + PS + A+ RR +P P A + ++ AP S AEP R VG+P P R+A + G E MR N A+ W +RPV ++G ++P K G+ V N+D Y EQDFFYIT + +L+ L R ++ GG XXXXXX XXXX A V +RG+F++Q + +L RP +E+ S LM KA+R L+RS R T++ ++ P + L SG AFAR +R T
Sbjct: 189 GGALAVDMGTGFACAVPLAATSDRHRC---SFHLVDLEDIGSYKQNIVLGSRVWLLNIVFGSRXXXXXXXXXXLIEAGTGDPSWHQGSVLGARVHEPGALPTIKLRAGADQDXXXXXXXXXXXXXXXXXXXXXXXXXMPSS--ITAAAADARRE--SPLPRLHAAQRSSTSGAPAPHSSVPXXXXXXXXXXXXXXXAEP--------------------------------RVVGMPRPVRSAVPRGSDAQGGGFGEQYMRMRNADAVNIAHWILRPVTAEGIALPDKMGQVVCNLDHCYLEQDFFYITFDPVTGAALLREL----RPSSGGGSXXXXXXXXXXXXXXXXXXXXXSSXXXXXXSGAAACPVVDKRGIFRLQTTEKTDLARPAKEQASMQLMSKARRQLQRSAVTRQRRCTFMRQRHSTTDTLASTRXXXXXXXXXXXXXXGEPHETLRSGGAFARGVRAAT 616
BLAST of mRNA_P-littoralis_Contig718.12.1 vs. uniprot
Match: A0A8J2X156_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X156_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.740e-12 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 1
Query: 856 SLNDDPLLRLHFGLHVTFQAIQGENGYFMALDMESGGVSMIPLHGLRKDQQARAVTFKLIDLEDPESYRSIFYGRSVWLQIVPGQGDPTWKQGSVLGARVHGPGMLPTVVIDPN 1197
SL D RLHFG + QA N F E G + + H KD V FKL++LE+P S+++ +G +VWLQI G G+P+W+ GSV+GA+V G LPTV IDPN
Sbjct: 130 SLATDNNTRLHFGAAIALQA-HVNNDAFCVKSQEDGRI-VATSHIGPKD----VVLFKLLELEEPGSHKACRFGDAVWLQICGGPGEPSWRHGSVVGAKVVGACNLPTVPIDPN 237
BLAST of mRNA_P-littoralis_Contig718.12.1 vs. uniprot
Match: A0A7S3JQ49_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQ49_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 7.040e-8 Identity = 48/129 (37.21%), Postives = 68/129 (52.71%), Query Frame = 1
Query: 820 SSAREEETQVLD---SLNDDPLLRLHFGLHVTFQAIQGENGYFMALDMESGGVSMIPLHGLRKDQQARAVT---FKLIDLEDPESYRSIFYGRSVWLQIVPGQGDPTWKQGSVLGARVHGPGMLPTVVI 1188
S+ ++E Q L N + RLH+G + ++I NG F+A+ G + R + T FKLI+LEDP S +++ YG VWLQI G G+P+W+ GSV+GARV LP V I
Sbjct: 118 STEKKETVQALRPKIEFNRNFNTRLHYGSTIALESIV--NGEFVAV---GSGPRLEGYMNSRLPEACNYDTVFLFKLIELEDPCSAKAVQYGDHVWLQIHGGNGEPSWRNGSVIGARVREAVSLPIVPI 241
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 2880.D7FWD3 |
| Model size | 3396 |
| Max annot lvl | 2759|Eukaryota |
| Hectar predicted targeting category | other localisation |
| Exons | 11 |
| Evalue | 6.78e-285 |
| EggNOG OGs | 29HMI@1|root,2RQU8@2759|Eukaryota |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-25_000580.1 |
| Cds size | 3396 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791493.2765002-CDS-P-littoralis_Contig718:44933..45016 | 1680791493.2765002-CDS-P-littoralis_Contig718:44933..45016 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 44934..45016 + |
| 1680791493.2904878-CDS-P-littoralis_Contig718:45449..46104 | 1680791493.2904878-CDS-P-littoralis_Contig718:45449..46104 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 45450..46104 + |
| 1680791493.306078-CDS-P-littoralis_Contig718:46402..46576 | 1680791493.306078-CDS-P-littoralis_Contig718:46402..46576 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 46403..46576 + |
| 1680791493.3217564-CDS-P-littoralis_Contig718:46917..47022 | 1680791493.3217564-CDS-P-littoralis_Contig718:46917..47022 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 46918..47022 + |
| 1680791493.3346918-CDS-P-littoralis_Contig718:47639..47859 | 1680791493.3346918-CDS-P-littoralis_Contig718:47639..47859 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 47640..47859 + |
| 1680791493.3518438-CDS-P-littoralis_Contig718:48215..48552 | 1680791493.3518438-CDS-P-littoralis_Contig718:48215..48552 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 48216..48552 + |
| 1680791493.3630395-CDS-P-littoralis_Contig718:49497..49624 | 1680791493.3630395-CDS-P-littoralis_Contig718:49497..49624 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 49498..49624 + |
| 1680791493.375581-CDS-P-littoralis_Contig718:50088..50312 | 1680791493.375581-CDS-P-littoralis_Contig718:50088..50312 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 50089..50312 + |
| 1680791493.3899968-CDS-P-littoralis_Contig718:50956..51460 | 1680791493.3899968-CDS-P-littoralis_Contig718:50956..51460 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 50957..51460 + |
| 1680791493.4004362-CDS-P-littoralis_Contig718:52159..52547 | 1680791493.4004362-CDS-P-littoralis_Contig718:52159..52547 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 52160..52547 + |
| 1680791493.4135745-CDS-P-littoralis_Contig718:53870..54449 | 1680791493.4135745-CDS-P-littoralis_Contig718:53870..54449 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig718 53871..54449 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig718.12.1 >prot_P-littoralis_Contig718.12.1 ID=prot_P-littoralis_Contig718.12.1|Name=mRNA_P-littoralis_Contig718.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1132bp
IDEIYITALLRGRHPRSFRSERGIYQHVKDSNKRANMKQRSHAPQHHRHH PALADSDFLLGRSSSGTDGRGSGVDLSMRSPPTAEVHFVTSPSFPEEDNV EESSYNDSPHRRERTASPSSSTRRRMTAAAPSMSAFAAGESGHTGTGMPI REQQQQPQQSPPLGRSATDREKRGVSRRRPRSGMLCSHSAFAHKSPPAPL GDGSTGPLGGYMIQQGKPFRGGPNDFQAGGPSASGGRGAGGHGGQQASRQ GRPGDRPLSVHQKFNAMVGIRQESSAREEETQVLDSLNDDPLLRLHFGLH VTFQAIQGENGYFMALDMESGGVSMIPLHGLRKDQQARAVTFKLIDLEDP ESYRSIFYGRSVWLQIVPGQGDPTWKQGSVLGARVHGPGMLPTVVIDPND SSTASSSMIYQSGGPSQPGTSEGASSVRRPGGTPAPGTPARKGNAQGNAP GTSSGGVRSAGAEPSCAHGGEGSARGSAGGTGRVSSAVGGGNTDADRPVG VPCPFRAAAAKHGGPNGTANETLMRAVNKSAIVNCRWTVRPVRSDGQSIP GKDGKEVSNMDFVYFEQDFFYITRVSENSSVVLKALSHQNRSAANGGVGV TGGGGGGGGGGGGGKRGTALRRYPVGRRGVFKVQVADADELRPGEERSAA LMRKAKRGLKRSEARRSGHRTYVHKQRPDDRLASGAAFAREIRVRTTRFA SESESRAICSTSQSSPSRGGTRGAAGGSGGGGSWDTGLVSHSRGGISEGP RGDGGSSWMTTGLLSPPVSYFPTESWGTKTLQVMTDAARAPAECGVAASH ARVLRQWKQRLGRPGATPSQADDLSNGGSTIGNADSSIIYGSRNDEGEDG GDGDSGGHRVEENVSPMCPRCRYLTSNPTAPSPPTKTPAASSIDAPAASP SSTSAAATAAAAANVAGDVALGRYCLCTVNREIQREVLQGTASGSHARSA TVDPAGTVPSAVAVAAAAAADVGAPPPANKTGGDAPNFHAPSRMSTPGSE HAAVAAAAAAGAAANGDLPLEGGRAAAGGPAPTGRPWATERHLSVGGTRA LARAPSSSAMAEPGLSSFTAGAFVGGAGAANGLKRARDRRADRRKKKDPF EALEERLLDGFSLESITRQLQQQDETLQKGVR back to topmRNA from alignment at P-littoralis_Contig718:44934..54449+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig718.12.1 ID=mRNA_P-littoralis_Contig718.12.1|Name=mRNA_P-littoralis_Contig718.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9516bp|location=Sequence derived from alignment at P-littoralis_Contig718:44934..54449+ (Pylaiella littoralis U1_48) ATCGACGAAATCTACATCACTGCGCTGCTGCGCGGGAGACATCCGAGGTC
TTTCCGTAGCGAGCGAGGAATCTACCAGCATGTGTGAGTATTTGATATTG
GCGAGAAGAGCAGGCTCTCGTTCAAATTAACTCGAACAAAGACAGAGCTG
GGGTCACGGACGAAAACAAAACTGTTGCGGCAAGCCAGCATGGATGCCTG
TGGGTAAATTTAACAGTATATTCAATATTTCAAAATGTATTGATACAGGT
GATCAACGCCTTGCACACTTCGAACTTGCTTCGAGCCCGATAGGAGACTA
TTTTGTGCTGCTTTGGGTTGAGCGCGGTACTTGATGATACGCGTAGAGTT
CTTGCCCGATCAAAGGATTGGGGTGATCAGCCATTTTTCTCTCTCAAATG
GCCGATTCATTGTCATTCTTCAAGTAGCAGCATAGGGTATCCGCACAGAC
ACTGGTACCTTTTCCCATCGTCCCACTGCTTGTTAAACATGCGCACTTGA
CCCCAAACATGTGTAGCAAGGACTCGAACAAGCGAGCGAATATGAAGCAA
AGGAGCCATGCTCCGCAACACCACCGCCACCACCCTGCGCTCGCTGACTC
TGACTTTTTACTGGGGCGTTCCTCAAGCGGTACCGACGGCCGTGGCAGTG
GTGTGGACCTCTCCATGCGGTCACCACCAACTGCCGAGGTACACTTCGTC
ACCTCCCCCTCCTTCCCAGAAGAGGATAATGTCGAAGAAAGCAGCTACAA
CGACAGCCCTCATCGACGTGAGCGGACCGCGTCACCCTCATCGTCTACGC
GGCGACGAATGACGGCGGCGGCGCCATCGATGTCAGCTTTCGCGGCGGGG
GAAAGCGGCCACACCGGCACGGGAATGCCAATAAGGGAACAGCAGCAACA
GCCACAGCAGTCACCTCCACTAGGACGGTCAGCTACCGACAGAGAAAAAA
GAGGTGTCTCGCGAAGACGTCCGAGGTCGGGAATGTTGTGCTCGCACAGT
GCGTTTGCCCACAAGAGCCCTCCCGCACCGCTTGGAGACGGTAGCACCGG
CCCGTTGGGTGGGTATATGATCCAGCAGGGTAAGCCGTTTAGAGGTGGCC
CAAATGATTTCCAAGCAGGGGGGCCATCGGCTAGTGGAGGGCGGGGGGCC
GGGGGACATGGTGGGCAGCAGGTGCGATGAATGGGTTGGTGGTCACCCTT
CAGTGACTGTCAAGCAGGCTAGGCTATACCATCAGAACGAGCCAGAAATA
ATCGCCCGAATGAAGTTAATGTACTATTGGACAATGAAAGAAAGACATAG
CTGGTGTCTAGCCAACCGTAAAGGAGTCTCTTGGAGCGGGGAGAACGGCC
GTGTCACCCATTCGGTATACAATCCGTATTCGCCGCACGCCTCTGGCATG
CGCGCTGTGTATTTTTCTTTCCCCTTTTGACACCGTGAAATTTTGCTGCA
AATTCGCTTAAAACATCAGGCTTCGCGGCAGGGGCGGCCAGGAGATAGAC
CGCTGTCGGTGCACCAGAAGTTCAACGCGATGGTGGGCATTCGCCAGGAG
TCTTCCGCCAGGGAAGAGGAGACCCAGGTTCTTGACAGTCTCAACGACGA
CCCATTGCTGCGCCTTCACTTTGGCCTCCATGTCACTTTCCAGGTAACAA
CTCCGAAGGATTGCTGAGAATGTATCGAAACTCGTGTCTTGTTCTTGTCT
GCTGCTGCTGCTGCTGCGCCTGCACTTTGGCCACCGCGCCACAGTTAAGG
CGATATTTAAAAGTTGAAACCTTATTGTATGTGACTTGTTTCAATTTTTT
GCACTGACGATAGAGATGCCTTTGAAGCATTCCCTTTGCCCCTCGGACGG
CGTCGGCTTGCGAAATGTTGTAGTTTTCCACCCGCAGAAGCTGTTTGTTG
GACTGAACTGGTCGGTCGTTCAAGTCGGTTTATGCCACGAACAAAACCCC
CCTGCAAAAAACGAACTTCGCGATCTTCTTCCAGGCCATTCAGGGGGAGA
ACGGCTACTTCATGGCGCTTGACATGGAAAGTGGCGGGGTTTCCATGATT
CCGTTGCATGGTCTCCGAAAGGACCAACAGGCGAGAGCTGTTTTGACAGG
AGCACATCGGCCCTGAGGAAAGAACGTGTCGCCTACGAGGAAAGGGTCCT
AGACTGAGATTCAAAAAGTTGCCGTTGGAGCGTCTATCATCCTCAGACGA
GCGCTTCATTTGCTGACAAAATCCAAACGCTCGAGTGCTCCAACGTACGA
AATGACACGGCTCCAGAAAGCTGTCCAAGAGAACTTTCAAACGCCAATCA
TTCTTGGCACTGGCGCTATTCTGTTCGGCACTGAAGCTTCACCGGTATCT
TGTTGTGGAGACACAGCAGTACCAGGTCGGGAATCGGCTGTCGGGAGTTC
CGTAATGTACACCGCCTCAATCGGTACGATTAGCTCGTCAACGTGTTTGT
CGTTACAGCACGAGTGACGCCCCCCCCCTTGTTTCTTCGTAAACCCATAA
TTCAACCCATATGGGCTTCATTTCGTGCCTCCGTGTTGCAAACGCTGTCC
TTGCTCCGATAGACAGAGACGAAAAGTTCTTCGTGGAGTCGGTCGGGGGT
TACCCCGACACCATCAGGCAACAAGCAGAACGCATGGATCGACGAGGCAA
TCAGAAGAACTAAAAATGAAAAAAAACGTCGCATTATTCCTCAATGTAAA
TGCAAGGTGACCTTCAAGCTAATCGATCTAGAGGACCCCGAGTCATACCG
TTCCATCTTCTACGGTAGGTCGGTGTGGCTACAGATAGTCCCGGGGCAGG
GCGATCCCACCTGGAAGCAAGGGAGCGTGCTGGGCGCCCGCGTGCACGGT
CCCGGCATGCTGCCGACGGTGGTCATAGACCCGAACGACAGCAGCACAGC
ATCGTCGTCGATGATTTATCAATCAGGTAGGGGGGGCAGATATTGATGGC
AGGTTACGTCGCGGGGCACGACACGGGGAATAGCTACCCCCCCCTCGTTG
CCGACCTACGAAGGGTATGATATACGGCGAAAAATGCCACCACCCAAATG
ACGTACAAGCATGGCTATCATGTTTTACGCGACTGTTGCAGGGGACATTC
GGGGGTTGGGGGTGGGGTAGGGTGGGGCAGAGGATTACGGATCCTTGAGC
AACCCGATCCCCGTTAGAGCGTTACATGTCGCCGCTACTGCAAGACCTTT
GTCACACGCGCGCCATGGCCGGCGAACCACAAATATCGCCGCCCCGCTGT
TTGCATCTTGACCGCTGTGCGAGAAACAACAGGCGGGCCATCTCAGCCCG
GAACATCCGAAGGCGCCTCGAGCGTTCGACGCCCCGGGGGGACACCGGCG
CCCGGCACACCCGCCAGAAAAGGAAACGCCCAAGGGAATGCTCCCGGAAC
CTCGAGTGGGGGGGTCAGGAGCGCAGGGGCAGAGCCTAGCTGTGCTCACG
GGGGAGAAGGGAGCGCGCGGGGCAGTGCGGGTGGAACTGGAAGGGTGAGC
TCGGCAGTGGGCGGAGGCAACACGGATGCGGATCGGCCTGTGGGAGTGCC
GTGCCCGTTTCGAGCGGCTGCGGCCAAGCACGGGGGCCCCAACGGAACGG
CTAACGAGACCTTGATGAGGTGCTTCTCTTTTGCTCTCATGTGTATCGTC
TTCTTCTGCTCCTTTTTTTCTCCTGTTGACACATGTTTACGAGTATATAG
TACATTGCTGTCGTTTCTTTAACATTCTTGGGCTAGAGCAACGGCCCCTC
TTGTTGTCGTTCGTGCCCGGTGCACCAAAATAAAAATGTGTACCGGTGCT
GTGCTGCTTGTGTCGTCGCACCCCCCAACGTTCTCGACGGGATGCCCCTG
CCTCACACCTTGGTGTGACTCGTGGTGATGGTAGATCTGAACACTCCCTC
CTGTGGGTGCTTTTCGAGCCTAACGTTTCCCACTGGTGCGACTCCCGCGG
CTATACTCGTAGCTGCTCAAGTTTACTCGATGGAGGCTATGAAGTATTTA
CCCCGTCTTAGTCATTCAGGGGTGGTTTGAGCTTTAGCACGTTAAGGGAA
TAAAATACCTCCAAGAACCAGTCATTTTGGGGCCGGTCAAGAGCAAGCAT
CAATCGATATCTTGCTGGCGTGCCTCTTGTGCACCGGCCGCATTCATTGA
TTCACGAAAGGGTACGGTGATTCTCCGGAACGCCGACTCGTGGTTCCGAC
CGACCGAGTAATTTCTCCAAGCTCTTACACACAAGATGACGATTCGAGAA
GTACTGCTTCGAAGTTTGATACAAATTTTCAACGCGCAAAAAAGAGTTCG
TCTTCTACGGCATGCGTAGATTACGAATACCGTAGGCCTTTTGCTCCTTT
CAGTGTGTGCTACCCTACCTACGAATGTATGCATTTTCATCTCTCCTCAA
AGGATAAGTATAGAAAGAAGAGTCGGAACATACTGGCCGACCAGTGTTGT
CGTAGACGAGCAACACCAATACTCCTACGTACGGAAGGGGGATGTGAGTA
GTATTTGCCACCTCAAGTGTTCGCTTTTTTGCGCCCGCCCCTCCTCCCAC
CCGGGCGGCATCAGAGCGGTGAACAAGAGCGCAATCGTCAACTGCCGCTG
GACCGTTCGTCCGGTTCGCTCGGACGGGCAGTCCATCCCAGGAAAGGACG
GCAAGGAGGTTTCCAACATGGACTTCGTCTACTTTGAGCAGGTCAGAGAA
AGAGAAGTGGCGAAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCAGGCA
GGCAGGCAGGCACGGCGTGTTGACTAGTTCAACTGCTGGTGCACGGCAGC
ACTTCACACAGCAGTATACTCTAGCCTTTAAAGACCTAAATCACGCGAGT
CGGAGATAACGATCCGAGAAAGTTCGCGAGGGGTATTGGAGGACACGTCG
TGCGCGTTCCCTAAGTGGCCGCGTTTGACCTCTGCGCGAGTTCGCTACGA
AGAGAACATATGTACATATATCACACGGCCCGCTGATCTTTTGGTTCACA
CGACCAAAACTTAAAATCATGCAGTATATCGGCAAACACGAAACATTGAA
CGCCGCATGCAGCATTGTTTACTACGCAGAATGCAAGAGGGTACCGCTGT
AATGAAAGAGGGAGGCTATTTGCCTTCTCTACGATACCCCTACCACACAC
GTCAGGATTTTTTCTACATCACGAGGGTCAGCGAAAACTCTTCCGTTGTG
TTGAAGGCCTTGTCGCACCAAAACCGATCCGCCGCCAACGGTGGGGTGGG
CGTTACTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAAGA
GGGGGACCGCGCTCAGGCGTTATCCAGTGGGGCGGAGGGGCGTCTTCAAG
GTGCAGGTCGCCGATGCCGACGAACTTCGGTGAGCGATGATAGACTTCGT
TCAAGAGCGCGGCAGCTTTCAATCAATCAGTCAATCAGTCAATCAATTCC
TTCGATGTGGTTCCGAGAACCTCGCAACACCTCCATTTGTTCGCGCTGCT
GTAGTAATGTGCTCGTCCTTTTTTTTTGCAGGGGAAGGGGCTGGCTACAC
TCGAGAAGGCGTTTGTGTAGAAACTCCCTGCTACATTTGTCAGCCCCCCT
CTCGACTTTTCCTCTTCGGGTTTTATGTTGTAGGAGCCGTTCCCTGCTTC
CTTTCGATATAGCTTGGTATCTTCACGCAGAGGCTCCGGTTGTGTCCGGT
TGGAAACGCACCTTTCTGCCCACAGAGGGCATTTTTATTTCATCCCTGAT
GTTCCCCCCGCCGCTCGACGGTAATGCTCTCACATGCATGCACCCGTGTA
CGTCAGAGTCGGTCAGTTGCTTGTTCGCTCTCACCCCGAAACCCCTTCCA
GAGAACCAACGCACCAACGAGGAGATCCCAGGACACAACAACGTCAAACA
TAGCCAGCGGACTTTCGTGTGAACACCCCCTGATTGATCCTCCTGAATGT
ATGTGTTGTTTTCATCTCCGCATACCACAAAAAAACAAACGAAATACACA
CACACGCACACACACGAAAAAAGACCCGGGGAAGAACGCTCCGCCGCCCT
CATGCGTAAGGCCAAGCGGGGCCTCAAGCGGTCGGAAGCCCGCAGGAGTG
GCCACCGCACCTACGTCCACAAGCAGCGTCCCGACGACCGTCTCGCCAGC
GGGGCCGCGTTCGCGCGAGAAATCCGCGTCCGGACGACCCGCTTTGCGTC
GGAATCCGAATCCAGAGCCATCTGCAGCACGTCTCAATCGTCGCCTTCCC
GTGGGGGGACCAGGGGGGCGGCCGGCGGCAGCGGTGGTGGCGGCAGCTGG
GATACGGGACTTGTGAGTCACTCGCGTGGGGGGATTTCGGAAGGTCCTAG
GGGCGATGGTGGGTCCTCGTGGATGACGACGGGTCTGCTGTCCCCGCCCG
TGAGTTACTTTCCGACGGAGTCGTGGGGAACGAAGACGCTGCAGGTCATG
ACGGACGCGGCGAGGGCACCGGCGGAGTGCGGGGTGGCGGCGAGCCATGC
TCGCGTCTTGAGACAGTGGAAGCAAAGGTATTTCTAGTGTGACCCTTTGG
GGGGCGTAGCGCGCATTCCGGCCGTTCAGAACGAAATACTGCTGCATGCG
TACGTGCACCAGAAGCACCGCGAGGTTTTGTTATCCTAAGTCATGGTCTC
CCCCACTCGGACCTGATCGAAGCAGCCGAGATTACGGGACTGCTGTGCGT
ACTCGTATTTTTCTTACTGTATGGATTTCCACAATTAGAGGGAAACACGT
TCCTCGGGCTTGTAACAAAAATGACACCGGTTGCGTCCATGGTGGCGAGA
CAGATGTCGCAAGAAAAGCGAGACAATACATCGAAGCACCGCTCCGTGTA
TCGTGCTTCGAAGCACATAAAAAGTTGTGCAAGAAACTCGAAAGAGTTCG
ATTGGAACCGACTTAGTGCGATTGGAACCGACTTAGTGCGATTGGAACCG
AGACAATTCTTCAAACAAACACACACAAAACACACGTGCGCGCATGCCTC
GCTTCCAAGGTCTTTGCATTGCAGTGCGCCCCCCACACACAATCTATTAA
CTCCATAACTTTTCTGAGAAAATCTAATGAATATTACGTCGTTGTTTCGG
GCTTTACCTCGGGTGGCGTTGCTTTTAAAACAAATTGATGGAAAAGGAAA
AGAAATACTCGTTTCTTTATTTCGGCATTCTTTTCCAACCGCGGTAATCT
GTACCTTCTGCTGTGCATGCATTCAGGTTGGGCCGCCCGGGGGCGACACC
ATCGCAGGCCGACGACCTGAGCAATGGAGGGAGCACAATCGGCAACGCCG
ATAGTAGCATCATTTACGGCAGCAGAAACGACGAGGGTGAGGACGGCGGC
GACGGCGATAGCGGCGGACACCGCGTGGAGGAGAACGTTTCTCCCATGTG
CCCCCGCTGCCGGTACCTGACGTCGAACCCGACCGCACCATCCCCTCCGA
CGAAAACACCAGCAGCATCGAGTATCGACGCTCCTGCCGCCTCGCCCTCC
TCGACTTCGGCTGCCGCTACCGCTGCCGCCGCGGCCAACGTCGCCGGAGA
TGTAGCGCTCGGCCGCTACTGTCTCTGCACCGTCAACCGAGAAATTCAAC
GCGAAGTTTTGCAGGTTCGATTGTGTTTGTATGTGTGTGAGCGTGTTATA
TTTGCAAGGTGAGTCAACGTGAATCAACCTCCCCCCATCAAGGGCTGCGC
GGGGCTTTGTTAGCCCGCAGACGTTGCCTTTCTCTCTGAGCAGGGGGGAA
TCAGGAACCAAGCCGTGCAGTCCCACAGTGAATGTACCGTCATCAAAGTT
CATGTACGTGGGATTCGTGTGACGTTTGCGGATAAGCATGATTCTTTTGT
TAGTGATAGGGGCTAATCCTATACACCATAAAGTCAGATGTGGTGTATAG
GATTAGCCCCTATCACTAACAAAAGAACGACTTTGGGGATCCGAATCCTA
GCTCACCATTCTCCGGGGATTTGCCCCTCTTGCCATGTACTGCTTGTTGT
TTGTTGTTGTTGATTCTCACATTAGCTCACTACCCGCCGCAGTCTAGCCC
GTGGTCACAAACCAGGCACATATCGTGCTAGGAGGAAAAAAATAAAAATA
AATAAATGGACATGATCACCCACAGTCAAATCAGATATGGTACCGTTGGG
GTGCCATCTGTGGTGGCCAGAGTACCAAACAAAATACAGAAAAAAAAATA
AGAGGCTCGAAAGAAAAACAAAAATTGGAAACAGTCCGACAAACAAAAAT
AAGCAAGCCAAACCTCAACCATAACCATATACTCCGTACTTCGAAGTACT
TCGTACATCGAACCAGGGCCCAGGGCCATGACAGACCAAGGCAAAGGCAA
ACCAAGGCGATGGTCCAGTAACTATATGATCAATAGACGAAAGACAAAAA
AAAAAACTTGTGTTGACTGATGACCCTTGTATTAAAGAGAGCGTGCGTCA
CTTTATCCAATCAATCTGTTCCCAGCTTAATCAGAGATGGAAAAGTAACA
CCAGTGCTGGGGATATAACCCCCGGCACTTCCTTTGTCAGTTATATGGGC
TAATCCTATACACCATATGGTTAGCTGACTACGTGGTGTACATGATTAGC
CCATATCAACAACCTGACTATGTGGTGTATAGGGTTAGCCCCTATCACTA
ACACCTTTATCCCCTCGTTAGTGATTGAGCTTTGATCCAAAGATGAGCCT
CCATTTCAGCAACAACTTTGTTTCAAGCGCGTGCGCCGCCAACACTACTG
CTGCTGCCGCTCCGGAGTCTGTTATTCTCAGCAGACCTGACGATCAAAAT
ACATTCCTCCCTTCATGACAGTAGCAACGCTATCCTCGGCGATGAAGATA
TCCGAACAAACCGCTTTTCGTGCTTCACCGCCCATGATGCTACTGTACCC
GTGCGCCATCTTTTAGTGGCGACACAACAACCAAAAGGGCACCGCCAGCG
GCAGTCACGCTAGATCAGCTACCGTGGACCCGGCGGGGACAGTGCCGTCA
GCGGTAGCGGTAGCAGCAGCAGCCGCAGCCGATGTCGGGGCACCGCCGCC
AGCCAACAAAACTGGGGGTGACGCCCCCAACTTCCATGCCCCTAGCCGCA
TGTCAACTCCAGGTAGTGAACATGCCGCTGTCGCCGCCGCCGCTGCTGCC
GGTGCTGCGGCGAACGGAGACCTGCCGCTGGAAGGGGGCAGGGCCGCGGC
GGGAGGTCCTGCCCCCACCGGAAGACCCTGGGCGACAGAGAGACACCTCA
GCGTGGGCGGGACAAGGGCGTTGGCGCGGGCGCCTTCCTCGAGCGCGATG
GCGGAGCCCGGCCTTTCGTCCTTCACGGCGGGAGCGTTCGTTGGCGGCGC
CGGTGCGGCCAACGGGCTGAAGAGAGCGAGGGACAGGCGGGCGGACAGAA
GGAAGAAGAAGGACCCCTTCGAGGCCCTGGAGGAACGGCTGTTGGACGGC
TTCAGCCTGGAGAGCATCACCAGGCAGCTTCAGCAGCAGGACGAGACGCT
TCAGAAGGGGGTAAGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig718:44934..54449+ >mRNA_P-littoralis_Contig718.12.1 ID=mRNA_P-littoralis_Contig718.12.1|Name=mRNA_P-littoralis_Contig718.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3396bp|location=Sequence derived from alignment at P-littoralis_Contig718:44934..54449+ (Pylaiella littoralis U1_48) ATCGACGAAATCTACATCACTGCGCTGCTGCGCGGGAGACATCCGAGGTC TTTCCGTAGCGAGCGAGGAATCTACCAGCATGTCAAGGACTCGAACAAGC GAGCGAATATGAAGCAAAGGAGCCATGCTCCGCAACACCACCGCCACCAC CCTGCGCTCGCTGACTCTGACTTTTTACTGGGGCGTTCCTCAAGCGGTAC CGACGGCCGTGGCAGTGGTGTGGACCTCTCCATGCGGTCACCACCAACTG CCGAGGTACACTTCGTCACCTCCCCCTCCTTCCCAGAAGAGGATAATGTC GAAGAAAGCAGCTACAACGACAGCCCTCATCGACGTGAGCGGACCGCGTC ACCCTCATCGTCTACGCGGCGACGAATGACGGCGGCGGCGCCATCGATGT CAGCTTTCGCGGCGGGGGAAAGCGGCCACACCGGCACGGGAATGCCAATA AGGGAACAGCAGCAACAGCCACAGCAGTCACCTCCACTAGGACGGTCAGC TACCGACAGAGAAAAAAGAGGTGTCTCGCGAAGACGTCCGAGGTCGGGAA TGTTGTGCTCGCACAGTGCGTTTGCCCACAAGAGCCCTCCCGCACCGCTT GGAGACGGTAGCACCGGCCCGTTGGGTGGGTATATGATCCAGCAGGGTAA GCCGTTTAGAGGTGGCCCAAATGATTTCCAAGCAGGGGGGCCATCGGCTA GTGGAGGGCGGGGGGCCGGGGGACATGGTGGGCAGCAGGCTTCGCGGCAG GGGCGGCCAGGAGATAGACCGCTGTCGGTGCACCAGAAGTTCAACGCGAT GGTGGGCATTCGCCAGGAGTCTTCCGCCAGGGAAGAGGAGACCCAGGTTC TTGACAGTCTCAACGACGACCCATTGCTGCGCCTTCACTTTGGCCTCCAT GTCACTTTCCAGGCCATTCAGGGGGAGAACGGCTACTTCATGGCGCTTGA CATGGAAAGTGGCGGGGTTTCCATGATTCCGTTGCATGGTCTCCGAAAGG ACCAACAGGCGAGAGCTGTGACCTTCAAGCTAATCGATCTAGAGGACCCC GAGTCATACCGTTCCATCTTCTACGGTAGGTCGGTGTGGCTACAGATAGT CCCGGGGCAGGGCGATCCCACCTGGAAGCAAGGGAGCGTGCTGGGCGCCC GCGTGCACGGTCCCGGCATGCTGCCGACGGTGGTCATAGACCCGAACGAC AGCAGCACAGCATCGTCGTCGATGATTTATCAATCAGGCGGGCCATCTCA GCCCGGAACATCCGAAGGCGCCTCGAGCGTTCGACGCCCCGGGGGGACAC CGGCGCCCGGCACACCCGCCAGAAAAGGAAACGCCCAAGGGAATGCTCCC GGAACCTCGAGTGGGGGGGTCAGGAGCGCAGGGGCAGAGCCTAGCTGTGC TCACGGGGGAGAAGGGAGCGCGCGGGGCAGTGCGGGTGGAACTGGAAGGG TGAGCTCGGCAGTGGGCGGAGGCAACACGGATGCGGATCGGCCTGTGGGA GTGCCGTGCCCGTTTCGAGCGGCTGCGGCCAAGCACGGGGGCCCCAACGG AACGGCTAACGAGACCTTGATGAGAGCGGTGAACAAGAGCGCAATCGTCA ACTGCCGCTGGACCGTTCGTCCGGTTCGCTCGGACGGGCAGTCCATCCCA GGAAAGGACGGCAAGGAGGTTTCCAACATGGACTTCGTCTACTTTGAGCA GGATTTTTTCTACATCACGAGGGTCAGCGAAAACTCTTCCGTTGTGTTGA AGGCCTTGTCGCACCAAAACCGATCCGCCGCCAACGGTGGGGTGGGCGTT ACTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAAGAGGGG GACCGCGCTCAGGCGTTATCCAGTGGGGCGGAGGGGCGTCTTCAAGGTGC AGGTCGCCGATGCCGACGAACTTCGACCCGGGGAAGAACGCTCCGCCGCC CTCATGCGTAAGGCCAAGCGGGGCCTCAAGCGGTCGGAAGCCCGCAGGAG TGGCCACCGCACCTACGTCCACAAGCAGCGTCCCGACGACCGTCTCGCCA GCGGGGCCGCGTTCGCGCGAGAAATCCGCGTCCGGACGACCCGCTTTGCG TCGGAATCCGAATCCAGAGCCATCTGCAGCACGTCTCAATCGTCGCCTTC CCGTGGGGGGACCAGGGGGGCGGCCGGCGGCAGCGGTGGTGGCGGCAGCT GGGATACGGGACTTGTGAGTCACTCGCGTGGGGGGATTTCGGAAGGTCCT AGGGGCGATGGTGGGTCCTCGTGGATGACGACGGGTCTGCTGTCCCCGCC CGTGAGTTACTTTCCGACGGAGTCGTGGGGAACGAAGACGCTGCAGGTCA TGACGGACGCGGCGAGGGCACCGGCGGAGTGCGGGGTGGCGGCGAGCCAT GCTCGCGTCTTGAGACAGTGGAAGCAAAGGTTGGGCCGCCCGGGGGCGAC ACCATCGCAGGCCGACGACCTGAGCAATGGAGGGAGCACAATCGGCAACG CCGATAGTAGCATCATTTACGGCAGCAGAAACGACGAGGGTGAGGACGGC GGCGACGGCGATAGCGGCGGACACCGCGTGGAGGAGAACGTTTCTCCCAT GTGCCCCCGCTGCCGGTACCTGACGTCGAACCCGACCGCACCATCCCCTC CGACGAAAACACCAGCAGCATCGAGTATCGACGCTCCTGCCGCCTCGCCC TCCTCGACTTCGGCTGCCGCTACCGCTGCCGCCGCGGCCAACGTCGCCGG AGATGTAGCGCTCGGCCGCTACTGTCTCTGCACCGTCAACCGAGAAATTC AACGCGAAGTTTTGCAGGGCACCGCCAGCGGCAGTCACGCTAGATCAGCT ACCGTGGACCCGGCGGGGACAGTGCCGTCAGCGGTAGCGGTAGCAGCAGC AGCCGCAGCCGATGTCGGGGCACCGCCGCCAGCCAACAAAACTGGGGGTG ACGCCCCCAACTTCCATGCCCCTAGCCGCATGTCAACTCCAGGTAGTGAA CATGCCGCTGTCGCCGCCGCCGCTGCTGCCGGTGCTGCGGCGAACGGAGA CCTGCCGCTGGAAGGGGGCAGGGCCGCGGCGGGAGGTCCTGCCCCCACCG GAAGACCCTGGGCGACAGAGAGACACCTCAGCGTGGGCGGGACAAGGGCG TTGGCGCGGGCGCCTTCCTCGAGCGCGATGGCGGAGCCCGGCCTTTCGTC CTTCACGGCGGGAGCGTTCGTTGGCGGCGCCGGTGCGGCCAACGGGCTGA AGAGAGCGAGGGACAGGCGGGCGGACAGAAGGAAGAAGAAGGACCCCTTC GAGGCCCTGGAGGAACGGCTGTTGGACGGCTTCAGCCTGGAGAGCATCAC CAGGCAGCTTCAGCAGCAGGACGAGACGCTTCAGAAGGGGGTAAGA back to top
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