mRNA_P-littoralis_Contig717.25.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig717.25.1
Unique NamemRNA_P-littoralis_Contig717.25.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 487 bits (1253), Expect = 9.490e-167
Identity = 229/304 (75.33%), Postives = 261/304 (85.86%), Query Frame = 3
Query:   57 AAP*CRRLSKKICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHNVDSSSVGTKDVNDKPETETEHTVLKSQLITNYVYRLLRKENICWLSRETPE 968
            + P  +++  + C+H ATEMYD+HI+LPS+ NGELD+VMG YEKLGFPGAMGS DVTHI WSRCPYNQ RSYTGKEGKPTVGYQV V+H GRVLAVTEGFTGSTNDKTIIC D AVD+IR DKQY EK F V+K DGTT+TL+GCYLIVDNGYHKWR LI+P+KYP++E D+ FS RLESVRKDVECFFGILK RF ILKLAMTYQKQERLDYVFFTCCILHNMLHT+DGM  LEE+VNWVGSAEL+NT  HN+DSSSVGTKD+NDKP+ E  H  LK +L TN++YR   K++I WLSR+ PE
Sbjct:  151 STPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWLSRKRPE 454          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 1.780e-138
Identity = 192/280 (68.57%), Postives = 226/280 (80.71%), Query Frame = 3
Query:  114 MYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNT--WEHNVDSSSVGTKDVNDKPETETEHTVLKSQLITNYVYRLLRKENICW 947
            MYD+HI+LP++ +G+LD V+  Y++LGF GAMGS DVTHIAWSRCPYNQARSYTGKEG PT+GYQV VDH GR +AVTEGFTGSTNDKT +CWDAAV++IR DKQYTEK FDVY  DGTT TL+GCY++VDNGYHKW+ LI+P+KYP++E D+ FS RLESVRKDVECFFGILK R  IL LAM +Q QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA +  T   E   DS SVGTKDVN +P+ E  H V K QL T++ YR   K++I +
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTTSFAYRKKHKKDIVY 280          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 4.920e-137
Identity = 202/320 (63.12%), Postives = 234/320 (73.12%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYT----------------------------EKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTW--EHNVDSSSVGTKDVNDKPETETEHTVLKSQLITNYVYRLLRKENICWLSR 956
            K C+H A EMYD+ I+LP++ +G+LD VM  Y++LGF GA+GS DVTHIAWSRCPYNQARSYTGKEG PT+ YQV VDH GR +AVTEGFTGSTNDKTI+CWD AV++I  DK YT                            EK FDVY  DGTT TL+GCYL+VDNGYHKW+ LI+P+KYP++E D+ FS RLESVRKDVECFFGILK RF ILKLAM YQ QER+D VFFTC ILHNMLHT+DGMD L EN NWV SA +  T   E   D  SVGTKDVND+P+ E EHTV K QL T++ YR   K++I WLSR
Sbjct:  119 KFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTTSFAYRKKHKKDIVWLSR 438          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 7.100e-130
Identity = 184/259 (71.04%), Postives = 206/259 (79.54%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRN--TWEHNVDSSSVGTKDVNDK 857
            K CKH A EMYD+HIYLPS+ NGELD VM  Y++LGF GAMGS DVTHI WS+CPYN ARSYTGKEG PTVGYQV V+H GR +AVTEGFT STNDKT +CWDA V++IR D QYTEK FDVY  DGTT TL+GCYL+VDNGYHKW+ L++PTKYP++E DI FS RLESVRKDVECFFGILK  F I K+AM Y +QER+D VFFTCCILHNMLHT+DGMD L EN  WV SA        E   DSS+VG KD NDK
Sbjct:  132 KFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 2.080e-126
Identity = 184/292 (63.01%), Postives = 217/292 (74.32%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTW--EHNVDSSSVGTKDVNDKPETETEHTVLKSQLITNYVYRLLRKENICWLSR 956
            K C+  A EMYD+HI+LP++ +G+L  VM  Y++LG                 CPYNQARSYTGK+  PT+ YQV VDH  R +AVTEGFTGSTNDKTI+CWDAAVD+IR DKQYTEK FD+Y  DGTT TL+GCY + DNGYHKW+ LI+P+KYP++E+D+ FS RLESVRKDVECFFGILK RF ILKLAM YQ QER+D VFFTCCILHNMLHT+DGMD L EN NWV SA +  T   E   D  S GTKDVND+P+ E  HTV K QL T++ YR   K++I WLSR
Sbjct:   54 KFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWLSR 328          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 355 bits (912), Expect = 7.300e-115
Identity = 179/294 (60.88%), Postives = 214/294 (72.79%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTKDVN---DKPETETEHTVLKSQLITNYVYRLLRKENICWLS 953
            +  ++ A EMY +HI+LP+    +  KVM  Y++LGF GA GS DVTHI W  CPYNQARSYTGKEG PTV YQV VDHT RVLAVT GFTGSTNDK+II +D AV +IR D  Y+EK+F VY+ADGT   L+GCYL+VDNGYHKW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K RF ILKL++ Y KQE +D VFFTCCILHNMLH+YD    +EE  NW G+A L N WEHN  +D SSVG K  +   +  E E+     + QLI ++VYR   K +I WLS
Sbjct:  192 RFTRYFAREMYAEHIFLPTGDYQK--KVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRK-SKNDIAWLS 482          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 4.200e-114
Identity = 173/292 (59.25%), Postives = 215/292 (73.63%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEH--NVDSSSVGTKD-VNDKPETETEHTVLKSQLITNYVYRLLRKENICWLS 953
            + CK+ A E+YD+++YLP+    +L KVM  Y+++GFPGA+GS DVTHI W  CPYNQAR YTGKEGKPTV +QV VDH+GRVLAVT GFTG+TNDKTII +D AV +IR D  YTE+K+ +Y  DG     +GCYL+VDNGYHKWRTLI P+K PI   D+ FS RLES RKDVEC+FGILK RF I KLA+ + KQE +D VFFTCCILHNMLH++D   ++ E  NW GSA L N  +   N D SSVG+ D  ++  E ET    L+S+L+TN+VYR  +K +I WLS
Sbjct:  117 RFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 351 bits (900), Expect = 7.360e-113
Identity = 173/292 (59.25%), Postives = 215/292 (73.63%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEH--NVDSSSVGTKD-VNDKPETETEHTVLKSQLITNYVYRLLRKENICWLS 953
            + CK+ A E+YD+++YLP+    +L KVM  Y+++GFPGA+GS DVTHI W  CPYNQAR YTGKEGKPTV +QV VDH+GRVLAVT GFTG+TNDKTII +D AV +IR D  YTE+K+ +Y  DG     +GCYL+VDNGYHKWRTLI P+K PI   D+ FS RLES RKDVEC+FGILK RF I KLA+ + KQE +D VFFTCCILHNMLH++D   ++ E  NW GSA L N  +   N D SSVG+ D  ++  E ET    L+S+L+TN+VYR  +K +I WLS
Sbjct:  208 RFCKYFAAELYDEYVYLPT--GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 311 bits (798), Expect = 2.750e-99
Identity = 161/308 (52.27%), Postives = 204/308 (66.23%), Query Frame = 3
Query:   87 KICKHSATEMYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTKDVNDKP----------------ETETEHTVLKSQLITNYVYRLLRKENICWLSR 956
            K C+H A EM+D+HIYLP+     LD+VMG++ +LG+ GA GS DVTHI W+ CP+   RS+TGKEG PT+ Y V VDH GR LAVT GFTG+TNDKTII +D+ V++IR   QYTE+++ + KA+GT +   GC+LIVDNGYH+W TLI P+KYP   ED  FS  LESVRKDV CF         ILKL M Y K+E +D +FFTCCILHNMLHT+DG+D  EEN +W GSA   + WEH+   D +SVG+K V   P                E   +H  LK QLI ++ +R  +  +I WLSR
Sbjct:   70 KFCRHFAAEMFDEHIYLPT--GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRK-KINDITWLSR 366          
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 2.930e-98
Identity = 153/241 (63.49%), Postives = 179/241 (74.27%), Query Frame = 3
Query:  246 CPYNQARSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQIRRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITEEDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCCILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHN--VDSSSVGTKDVN---DKPETETEHTVLKSQLITNYVYRLLRKENICWLS 953
            CPYNQARSYTGKEG PTV YQV VDHT RVLAVT GFTGSTNDK+II +D AV +IR D  Y+EK+F VY+ADGT   L+GCYL+VDNGYHKW TLI P+KYPI + D+ FS RLESVRKDVECFFGI+K  F ILKL++ Y KQE +D VFFTCCILHNMLH+YD    +EE  NW G+A L N WEHN  +D SSVG K  +   +  E E+     + QLI ++VYR   K +I WLS
Sbjct:    2 CPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRK-SKNDIAWLS 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig717.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBE2_9PHAE9.490e-16775.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI1.780e-13868.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNX4_9PHAE4.920e-13763.13DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE7.100e-13071.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE2.080e-12663.01DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE7.300e-11560.88Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE4.200e-11459.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE7.360e-11359.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE2.750e-9952.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE2.930e-9863.49DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig717contigP-littoralis_Contig717:125129..126783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1438
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.79e-141
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size957
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791492.4796343-UTR-P-littoralis_Contig717:125128..1252411680791492.4796343-UTR-P-littoralis_Contig717:125128..125241Pylaiella littoralis U1_48UTRP-littoralis_Contig717 125129..125241 +
1680791492.5153956-UTR-P-littoralis_Contig717:126415..1267831680791492.5153956-UTR-P-littoralis_Contig717:126415..126783Pylaiella littoralis U1_48UTRP-littoralis_Contig717 126416..126783 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791492.491287-CDS-P-littoralis_Contig717:125241..1256491680791492.491287-CDS-P-littoralis_Contig717:125241..125649Pylaiella littoralis U1_48CDSP-littoralis_Contig717 125242..125649 +
1680791492.5054197-CDS-P-littoralis_Contig717:125866..1264151680791492.5054197-CDS-P-littoralis_Contig717:125866..126415Pylaiella littoralis U1_48CDSP-littoralis_Contig717 125867..126415 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig717.25.1prot_P-littoralis_Contig717.25.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig717 125242..126415 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig717.25.1

>prot_P-littoralis_Contig717.25.1 ID=prot_P-littoralis_Contig717.25.1|Name=mRNA_P-littoralis_Contig717.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=319bp
MYDDHIYLPSDGNGELDKVMGVYEKLGFPGAMGSPDVTHIAWSRCPYNQA
RSYTGKEGKPTVGYQVMVDHTGRVLAVTEGFTGSTNDKTIICWDAAVDQI
RRDKQYTEKKFDVYKADGTTQTLEGCYLIVDNGYHKWRTLIDPTKYPITE
EDIRFSGRLESVRKDVECFFGILKARFSILKLAMTYQKQERLDYVFFTCC
ILHNMLHTYDGMDNLEENVNWVGSAELRNTWEHNVDSSSVGTKDVNDKPE
TETEHTVLKSQLITNYVYRLLRKENICWLSRETPEPVGEYRNNAGLGTYW
GLRTYRVLATGCALKILK*
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mRNA from alignment at P-littoralis_Contig717:125129..126783+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig717.25.1 ID=mRNA_P-littoralis_Contig717.25.1|Name=mRNA_P-littoralis_Contig717.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1655bp|location=Sequence derived from alignment at P-littoralis_Contig717:125129..126783+ (Pylaiella littoralis U1_48)
TACCATACTGGCCAGGGGAAACTGTTTCGGAAGCATCTACATGCTTTCAT GGATGAGCAGCACCGTAGTGCAGAAGACTTTCCAAAAAAATTTGCAAGCA CTCCGCGACGGAGATGTACGACGACCACATCTACCTCCCGTCGGACGGAA ACGGCGAGCTTGATAAAGTCATGGGAGTGTACGAGAAGCTGGGGTTTCCG GGCGCGATGGGTTCCCCTGATGTTACCCACATCGCGTGGAGTAGATGCCC CTACAACCAAGCCCGTTCGTACACCGGCAAGGAAGGCAAGCCCACGGTCG GGTACCAGGTGATGGTCGACCACACTGGGCGCGTGTTGGCTGTTACAGAG GGATTCACCGGGTCCACCAACGACAAGACGATTATCTGCTGGGATGCAGC GGTGGATCAGATTCGTCGCGACAAGCAGTACACAGAAAAAAAGTTCGACG TCTACAAAGCGGATGGTACCACGCAAACCCTGGAGGGGTGCTACTTGATT GTCGACAACGGATATCACAAGGTAAAAATACGTGAATGACGTTGAACGCA CTTCTCTTGTTGCAGGGTCAAGTGTTGTATTTCAGAAATCGCTAAACGTG GTGCCGGTTGGCCGCGCTCCAAAGTGTCTTTAAGATTCTCGGGTGTGTCG TGTCCACCGTGTACGCGGTACTCATGAAGAGGAGACACTGACCTTGAAAT ACTCCCTTTGTCCGCCTCTGTCTTTCGTTCCATTCAAGTGGCGTACGTTG ATCGACCCCACCAAATACCCGATAACCGAGGAAGACATTCGGTTCTCGGG GAGGTTGGAGAGCGTGCGGAAGGACGTGGAGTGCTTTTTCGGTATCCTGA AGGCCCGCTTCAGCATACTCAAGCTCGCCATGACCTACCAGAAGCAGGAG CGCCTGGACTACGTGTTCTTCACGTGCTGCATCCTGCACAATATGCTTCA TACCTACGACGGCATGGACAACCTGGAGGAGAACGTCAACTGGGTCGGTA GTGCCGAGCTCCGGAACACGTGGGAGCACAACGTGGACTCCAGCTCGGTC GGGACGAAGGACGTGAACGACAAGCCTGAAACCGAGACGGAGCACACGGT GCTCAAGAGTCAGCTCATCACGAACTACGTGTACCGCTTACTGCGCAAGG AGAATATTTGTTGGCTTTCTAGGGAGACGCCGGAGCCAGTTGGTGAATAC CGTAATAATGCGGGTCTTGGCACATATTGGGGTCTCCGCACATATCGAGT TCTTGCCACAGGGTGTGCGTTGAAAATACTGAAATAAAATATTTAATTCG ATTATCGCACAGGCATCGGGTTCTCCGCACAGTGTGCGGAGACCCGCGCA ATTACGGTATGCCACGGGGGTGGTGTCCAGCATTGCGCGCCAAAGCACAT GCGGTACTTCAGGACTTGTATCACGGGCGGCACTGCTGTACTTCGGCCAC ACGTCGGTGCTTATAGGCAATCAATTAGCCGTTTTGTTCGGTTGGACTCT TTTTGTTATTATGTTTGTCGAAAATGGAAGACATCGCCCACACAAGTCGA CGTACAAACCACACGAGACCAGAACCACTGCAACCAACTGGTACGTATGG TACCGTATACGAACGCCGGTAGACGGAAGTAAAACAAAGGTACCTACCGC TCTAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig717:125129..126783+

>mRNA_P-littoralis_Contig717.25.1 ID=mRNA_P-littoralis_Contig717.25.1|Name=mRNA_P-littoralis_Contig717.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=957bp|location=Sequence derived from alignment at P-littoralis_Contig717:125129..126783+ (Pylaiella littoralis U1_48)
ATGTACGACGACCACATCTACCTCCCGTCGGACGGAAACGGCGAGCTTGA
TAAAGTCATGGGAGTGTACGAGAAGCTGGGGTTTCCGGGCGCGATGGGTT
CCCCTGATGTTACCCACATCGCGTGGAGTAGATGCCCCTACAACCAAGCC
CGTTCGTACACCGGCAAGGAAGGCAAGCCCACGGTCGGGTACCAGGTGAT
GGTCGACCACACTGGGCGCGTGTTGGCTGTTACAGAGGGATTCACCGGGT
CCACCAACGACAAGACGATTATCTGCTGGGATGCAGCGGTGGATCAGATT
CGTCGCGACAAGCAGTACACAGAAAAAAAGTTCGACGTCTACAAAGCGGA
TGGTACCACGCAAACCCTGGAGGGGTGCTACTTGATTGTCGACAACGGAT
ATCACAAGTGGCGTACGTTGATCGACCCCACCAAATACCCGATAACCGAG
GAAGACATTCGGTTCTCGGGGAGGTTGGAGAGCGTGCGGAAGGACGTGGA
GTGCTTTTTCGGTATCCTGAAGGCCCGCTTCAGCATACTCAAGCTCGCCA
TGACCTACCAGAAGCAGGAGCGCCTGGACTACGTGTTCTTCACGTGCTGC
ATCCTGCACAATATGCTTCATACCTACGACGGCATGGACAACCTGGAGGA
GAACGTCAACTGGGTCGGTAGTGCCGAGCTCCGGAACACGTGGGAGCACA
ACGTGGACTCCAGCTCGGTCGGGACGAAGGACGTGAACGACAAGCCTGAA
ACCGAGACGGAGCACACGGTGCTCAAGAGTCAGCTCATCACGAACTACGT
GTACCGCTTACTGCGCAAGGAGAATATTTGTTGGCTTTCTAGGGAGACGC
CGGAGCCAGTTGGTGAATACCGTAATAATGCGGGTCTTGGCACATATTGG
GGTCTCCGCACATATCGAGTTCTTGCCACAGGGTGTGCGTTGAAAATACT
GAAATAA
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