mRNA_P-littoralis_Contig716.19.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A6H5KTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE) HSP 1 Score: 400 bits (1027), Expect = 1.810e-135 Identity = 206/240 (85.83%), Postives = 219/240 (91.25%), Query Frame = 2
Query: 341 MVEGIKENKAN-GPGKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPAVTQMLKDLGLDKTWDAEPVSGGTALRESGLTGILEAALASARSRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLERRSPQGLSESP 1057
MVEG KE+KAN G+RATLVLVSKYPTPGSSKTRLIPALG LAA+LAMAMLQDLL+RFSIEDP E RKVFVYAPPSAGP+V +MLKDLGLDK WDAEPVS GT LRESGLT ILEAALASARSRERDGAVIFVGMDTPELPWSEV+AA+++AEKDGKAYICPASDGGYTLLGLP AGRG FEGVKWSD+LTCKSQT ALASRGVSTR GGTYHDVDEADDVAGLE+RSP+GL SP
Sbjct: 1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLKRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKAWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPASDGGYTLLGLPPKAGRGTFEGVKWSDSLTCKSQTLALASRGVSTRTGGTYHDVDEADDVAGLEKRSPRGLEGSP 240
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: D8LGD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGD1_ECTSI) HSP 1 Score: 273 bits (697), Expect = 4.770e-87 Identity = 142/165 (86.06%), Postives = 152/165 (92.12%), Query Frame = 2
Query: 341 MVEGIKENKAN-GPGKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPAVTQMLKDLGLDKTWDAEPVSGGTALRESGLTGILEAALASARSRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICP 832
MVEG KE+KAN G+RATLVLVSKYPTPGSSKTRLIPALG LAA+LAMAMLQDLL+RFSIEDP E RKVFVYAPPSAGP+V +MLKDLGLDKTWDAEPVS GT LRESGLT ILEAALASARSRERDGAVIFVGMDTPELPWSEV+AA+++AEKDGKAYICP
Sbjct: 1 MVEGDKEHKANKDAGRRATLVLVSKYPTPGSSKTRLIPALGEALAAQLAMAMLQDLLQRFSIEDPAGEFRKVFVYAPPSAGPSVNKMLKDLGLDKTWDAEPVSSGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICP 165
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A835Z1N4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N4_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.690e-49 Identity = 96/212 (45.28%), Postives = 128/212 (60.38%), Query Frame = 2
Query: 392 TLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPAVTQMLKDLGLDKTWDAEPVSGGTALRESGLTGILEAALASARSRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLER 1027
+LVL++K P G SKTRLI G +LA AML DLLRRF R +R+V VYAPP A +++++ G++ W PV+GGT L+++ LT IL+ AL R G V+FVGMDTP LP E++ A +D A +CPA+DGGYTLLG+P A F+GV WS TC++Q L G+S +G TY D+D A+DV R
Sbjct: 5 SLVLIAKCPRMGISKTRLIACFGEEATFQLARAMLLDLLRRFGSSAELRSLRRVLVYAPPEARDEAAKLVREAGVEHEWVLTPVAGGTKLKDADLTAILKDALEGTREEGTTGTVVFVGMDTPHLPSFEIIEACRKGAED-VALVCPANDGGYTLLGVPRNAPAKIFDGVLWSSPKTCETQVTRLRECGISVMIGATYEDLDTAEDVHSWHR 215
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A7S2CAW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAW3_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.750e-39 Identity = 102/267 (38.20%), Postives = 138/267 (51.69%), Query Frame = 2
Query: 386 RATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPAVTQMLKDLGLDK-TWDAEPVSGGTALRESGLTGILEAALASARSRERD--------------GAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLERRS--------PQGLSESPPSFLQYGFCLVSSSRLLRAI 1117
R ++LV+K+PT G SKTRL+PALG +A A++ D L + KV ++AP S+ ++L+DLGLD TW P+ G LR S L G L L AR+ GA +F+GMD PE+ ++ A A G AYICPA+DGGYTLL LP A F GV+WS TC SQ +AS+G+ VG TY D+D+ D+ GL +R P L+ES P+ S+SR+ A+
Sbjct: 52 RDVIILVAKFPTRGKSKTRLMPALGEDGTLAIARALVSDALYSVGTAPELKAATKVLLFAPESSRSDFQRLLQDLGLDAATWVLIPIQQGDDLRSSDLGGKLAFGLKDARAVPSASFGGDGKMVAGLSRGAALFIGMDAPEVSPLQIAQALATARSRGSAYICPATDGGYTLLALPPGAPDTVFSGVRWSADDTCLSQMSQIASKGIPVLVGPTYDDIDDIHDLRGLSQRLRRQQLSCVPGELNESAPA---------STSRIFSAL 309
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: K0S136_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC) HSP 1 Score: 151 bits (382), Expect = 1.030e-38 Identity = 96/247 (38.87%), Postives = 136/247 (55.06%), Query Frame = 2
Query: 380 GKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAP--PSAGPAVTQMLKDLGLDK--------------TWDAEPV-SGGTALRESGLTGILEAALASARSRERDGAVIFVGMDTPELPWSEVMAA-KNAAEKD-GKAYICPASDGGYTLLGLPAAAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLERRSPQGLSESPPS 1063
G+ T+V+ +K P PGSSKTRL P LG AA LA AML D+L + D ++ K+ VYAP + G +T++L LGL W P+ S + L S L L +L AR + V+F+GMD+PE+P E++ + A+ KD +AY+CPA+DGGY LL LP+ A F G++WS ALT SQ +AL+ G+ +G +D+DE +DV+ L +R SE S
Sbjct: 2 GRNGTIVVFAKCPLPGSSKTRLAPLLGDDGAALLAQAMLSDVLSSLTACDHLQDTLKLLVYAPGDSNTGSRMTKILASLGLSSCSSESYTPRKDTTSNWVLMPMLSDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCPANDGGYGLLALPSCAPTSVFSGIRWSCALTAVSQLKALSDSGIDVSIGRLMYDIDEPEDVSSLAKRLSSPFSEEATS 248
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A6S9DJ27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DJ27_HETAK) HSP 1 Score: 140 bits (354), Expect = 5.980e-35 Identity = 84/211 (39.81%), Postives = 117/211 (55.45%), Query Frame = 2
Query: 392 TLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPAVTQMLKDLGLDKTWDAEPVSGGTALRESGLTGILEAALASARSRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAA-GRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGL 1021
TL+ V+K+P+ G+SKTRLIP LG A LA AM++DL+ +FS + + I KV +AP A L+ + + W P+ L+ L L A + GA FVGMDTP+LP + V A + G+A++CPA+DGGY LLGLPA A F GV+WS TC+ Q RA+ + + G Y DVD+A+D+ L
Sbjct: 4 TLIFVTKWPSIGASKTRLIPDLGEEGAFLLAKAMVEDLIIKFSSSESLQNINKVLYFAPEEAKEDACSFLQQNDITEQWVLLPMIQSNELQSPDLGDKLVHAHNTCTQWFGPGATAFVGMDTPQLPAAAVARALTEG-RGGRAFVCPATDGGYVLLGLPAGAPAEACFRGVRWSADTTCEDQVRAINAASIEVVTGDIYTDVDDAEDMEAL 213
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A7S4QW63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QW63_9STRA) HSP 1 Score: 129 bits (325), Expect = 8.220e-31 Identity = 100/251 (39.84%), Postives = 130/251 (51.79%), Query Frame = 2
Query: 365 KANGPGKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSA-GPA-VTQMLKDLGLDKT------------------WDAEPVSGGTALRESGLTGILEAALASAR--------SRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGA-FEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLERR 1030
KANG +VLV+K P PG SKTRL P LG+ AA LA AML D+L P + KV +YAP + G A + +LKDLGL T W P+ T+L+ S L G L L R S +G V+F+GMD+PELP E+ A + + KA++CPA+DGGY +L +P+ A FE V+WS LT SQ +AL GV +G D+DE +DV GL R
Sbjct: 2 KANG-----AIVLVAKCPIPGKSKTRLTPLLGSDGAASLARAMLSDILVTLLSSFP-ENVLKVLLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTSLQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQ--KAHLCPANDGGYGMLCVPSHAPCPTIFEHVQWSTHLTAVSQLKALTDCGVEVSLGKLMFDIDEMEDVRGLAGR 244
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A7S4QUD2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUD2_9STRA) HSP 1 Score: 129 bits (325), Expect = 4.930e-30 Identity = 100/251 (39.84%), Postives = 130/251 (51.79%), Query Frame = 2
Query: 365 KANGPGKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSA-GPA-VTQMLKDLGLDKT------------------WDAEPVSGGTALRESGLTGILEAALASAR--------SRERDGAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGA-FEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDVAGLERR 1030
KANG +VLV+K P PG SKTRL P LG+ AA LA AML D+L P + KV +YAP + G A + +LKDLGL T W P+ T+L+ S L G L L R S +G V+F+GMD+PELP E+ A + + KA++CPA+DGGY +L +P+ A FE V+WS LT SQ +AL GV +G D+DE +DV GL R
Sbjct: 2 KANG-----AIVLVAKCPIPGKSKTRLTPLLGSDGAASLARAMLSDILVTLLSSFP-ENVLKVLLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTSLQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQ--KAHLCPANDGGYGMLCVPSHAPCPTIFEHVQWSTHLTAVSQLKALTDCGVEVSLGKLMFDIDEMEDVRGLAGR 244
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A8J6CB20_DIALT (Vesicle-fusing ATPase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB20_DIALT) HSP 1 Score: 134 bits (336), Expect = 8.560e-30 Identity = 89/208 (42.79%), Postives = 120/208 (57.69%), Query Frame = 2
Query: 395 LVLVSKYPTPGSSKTRLIPA-LGAVLAAKLAMAMLQDLLRRFSIEDPTREIRKVFVYAPPSAGPA--VTQMLKDLGL-DKTWDAEPVSGGTALRESGLTGILEAALASARSRERD-GAVIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPAAAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEA 1003
LVLV+KYPTPG+SKTRL + LG A++A AML D+L R + P +++V +++PP A ++L++ G + W P+ T R S LT +L AL R+R IF+G D P + V AA A DG+A++CPA DGGYTLLG+PA A F GV+WS A T SQ LA GV +G T+ DVD+A
Sbjct: 39 LVLVAKYPTPGASKTRLAASGLGDARTAEVARAMLLDVLARHARAGP--RVQRVLLFSPPDGAHADKFARLLREAGCAEGDWTLVPMRS-TDARSSNLTAVLMDALTRVRARFAPVSTTIFIGADAPTVGEDAVRAAI-VAGLDGRAHLCPAEDGGYTLLGVPADAPASIFAGVRWSAATTAISQAARLAEAGVRVDIGATFVDVDDA 242
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Match: A0A7S3X3J9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X3J9_9SPIT) HSP 1 Score: 125 bits (314), Expect = 2.860e-29 Identity = 91/221 (41.18%), Postives = 119/221 (53.85%), Query Frame = 2
Query: 392 TLVLVSKYPTPGSSKTRLIPALGAVLAAK--------LAMAMLQDLLRRFSIEDPTREIRKVFVYAPPS--AGPAVTQMLKDLGLDKTWDAEPVSGGTALRESGLTGILEAALASARSRERDGA---VIFVGMDTPELPWSEVMAAKNAAEKDGKAYICPASDGGYTLLGLPA-AAGRGAFEGVKWSDALTCKSQTRALASRGVSTRVGGTYHDVDEADDV 1012
TLVL++K P P SKTRL +L +L K A++ L DLL+RFS++ R+V +YAPP+ + ++ +L LG+ K W PV E + L A L A R + +IF+GMD+P LP E+ A AYICPA DGGY LLGLPA A AF V WS + TC+SQ ALA G +G TY DVDEA+D+
Sbjct: 17 TLVLLAKRPGP-KSKTRLAVSLVPLLGPKAAQDFTTDFALSSLSDLLQRFSMDCD----RRVLLYAPPTDVSREHLSSLLDALGVAKAWTLLPV---LETPEGSSSSDLGAILMDAAKRCPSASAPNLIFIGMDSPTLPSKELTKAAQVCSTSSHAYICPAVDGGYVLLGLPADAKAEVAFADVSWSASDTCESQVDALARAGCKCEIGPTYADVDEAEDL 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig716.19.1 >prot_P-littoralis_Contig716.19.1 ID=prot_P-littoralis_Contig716.19.1|Name=mRNA_P-littoralis_Contig716.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=276bp MVEGIKENKANGPGKRATLVLVSKYPTPGSSKTRLIPALGAVLAAKLAMAback to top mRNA from alignment at P-littoralis_Contig716:76576..88428- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig716.19.1 ID=mRNA_P-littoralis_Contig716.19.1|Name=mRNA_P-littoralis_Contig716.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11853bp|location=Sequence derived from alignment at P-littoralis_Contig716:76576..88428- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig716:76576..88428- >mRNA_P-littoralis_Contig716.19.1 ID=mRNA_P-littoralis_Contig716.19.1|Name=mRNA_P-littoralis_Contig716.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=828bp|location=Sequence derived from alignment at P-littoralis_Contig716:76576..88428- (Pylaiella littoralis U1_48)back to top |