mRNA_P-littoralis_Contig716.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JYS0_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYS0_9PHAE) HSP 1 Score: 296 bits (759), Expect = 5.300e-95 Identity = 173/249 (69.48%), Postives = 183/249 (73.49%), Query Frame = 1
Query: 10 TPQGTKTTKAFAESGQKVVGSMRSNSRENTT-VVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTP-VRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
TPQGTKTTKAFAESGQKVVGSMRSNSRENTT VV TISADGHTW PTII KGH + E AR +QG + L+ + F + + +EV RLAMNLKIIL QLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERR ERPPLQDV +AA NEQL
Sbjct: 148 TPQGTKTTKAFAESGQKVVGSMRSNSRENTTTVVVTISADGHTWAPTIIFKGHRLQADWFVERNGPEGARYTCTDSSFMQGDVFIAYLKDFHKQFG----ERGLLDGKPHILLLDGHSSHVRVEVTRLAMNLKIILIQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTANKKERRAERPPLQDVTMAALNEQL 392
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 274 bits (700), Expect = 3.450e-87 Identity = 160/233 (68.67%), Postives = 170/233 (72.96%), Query Frame = 1
Query: 58 KVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPI------GL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
KVVGSMRSNSRENTTVVATISADGHTW PTII KG + GL E A+ +QG + + + F + S+EVI+LAMNLKIILFQLPSHTSHITQPLDVVAFG FKKSVTRVLASFY NSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTA KKERRDERPPLQDVPIAA NEQL
Sbjct: 203 KVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGL--EGAKYTCTDYSFMQGD---LFIAYLKDFHKQLCDRGLLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTATKKERRDERPPLQDVPIAALNEQL 430
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5KNQ5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ5_9PHAE) HSP 1 Score: 270 bits (689), Expect = 1.800e-85 Identity = 165/287 (57.49%), Postives = 178/287 (62.02%), Query Frame = 1
Query: 25 KTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARRVQG----TPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGL------------------------------------------------LPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
+T +AFAESGQKVVGSMRSNSRENTTVVATISADGHTW PTII KG + E AR T + + + F + S+EVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVL+SFYHNSGGL LPL+RDMPGVIADAWK SFTPEIN+SSFAGAGLWPVNK++ALGRLKGTAKKKERRDERPPLQDVPI A NEQL
Sbjct: 146 RTRQAFAESGQKVVGSMRSNSRENTTVVATISADGHTWAPTIIFKGQRLQADWFVERNGPEGARYTCTDSFFTQENVFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLSSFYHNSGGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPLERDMPGVIADAWKLSFTPEINQSSFAGAGLWPVNKEQALGRLKGTAKKKERRDERPPLQDVPITALNEQL 432
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JIF7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIF7_9PHAE) HSP 1 Score: 262 bits (669), Expect = 4.640e-83 Identity = 152/226 (67.26%), Postives = 162/226 (71.68%), Query Frame = 1
Query: 73 MRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*S----EAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
MRSNS ENTTVVATISADGHTW PTII KG + G E AR +QG +L + + F + S+EVIRLAMNLK ILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLA FYHNSGGLLPLK DMPGVIADAWK+SFTPEINKSSFA AGLWPVNK+RALGRLKGTAKKKERR ERPPLQ VP+AA NEQL
Sbjct: 1 MRSNSLENTTVVATISADGHTWAPTIIFKGQRLQADGFEERNGPEGARYTCTGSSFMQGD---VLIAYLKDFHKQLGDRGLLDGKPHKLLLDGLASHVSVEVIRLAMNLKTILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLAFFYHNSGGLLPLKCDMPGVIADAWKSSFTPEINKSSFAEAGLWPVNKERALGRLKGTAKKKERRGERPPLQVVPVAALNEQL 223
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JMY5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMY5_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.980e-77 Identity = 122/128 (95.31%), Postives = 125/128 (97.66%), Query Frame = 1
Query: 334 SMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
S+EVIRLA+NLKII FQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTAKKKERRDERPPLQDVPIAA NEQL
Sbjct: 40 SVEVIRLAVNLKIIFFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTAKKKERRDERPPLQDVPIAALNEQL 167
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5KVC0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVC0_9PHAE) HSP 1 Score: 234 bits (596), Expect = 3.460e-73 Identity = 119/128 (92.97%), Postives = 121/128 (94.53%), Query Frame = 1
Query: 334 SMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
S+EVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKS TRVLASFYHNSGGLL LKRDMPG IADAWK SFTPE NKSSFAGAGLWPVNK+RALGRLKGTAKKK RRDERPPLQDVPIAA NEQL
Sbjct: 40 SVEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSATRVLASFYHNSGGLLLLKRDMPGAIADAWKLSFTPERNKSSFAGAGLWPVNKERALGRLKGTAKKKARRDERPPLQDVPIAALNEQL 167
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5L2E0_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E0_9PHAE) HSP 1 Score: 236 bits (603), Expect = 4.370e-72 Identity = 140/218 (64.22%), Postives = 150/218 (68.81%), Query Frame = 1
Query: 97 TTVVATISADGHTWPPTIILKGH----DFRPIGL*SEAARR-------VQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
T VVA ISAD HT PTII KG D+ E AR +QG + + + F + S+EV +LAMNLKII FQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGG LPLKRDMPGVIADAWK SF PEINKSSFAGAGLWPVNK+RALG+LKGTA KKERRDERPPLQDVPIAA NEQL
Sbjct: 159 TNVVANISADDHTLAPTIIFKGQRLQTDWFAERNGPEGARYTCTGSSFMQGD---VFIAYLKDFHKQLGDRGLLDGKPHILLLDGHASHVSVEVSKLAMNLKIISFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGSLPLKRDMPGVIADAWKLSFAPEINKSSFAGAGLWPVNKERALGQLKGTANKKERRDERPPLQDVPIAALNEQL 373
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JYA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYA0_9PHAE) HSP 1 Score: 231 bits (588), Expect = 1.190e-71 Identity = 116/120 (96.67%), Postives = 117/120 (97.50%), Query Frame = 1
Query: 358 MNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
MNLKIILFQLPS TSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWK SFTPEINKSSFAGAGLWPVNK+RALGRLKGTAKKKERRDERPPLQDVPIAA NEQL
Sbjct: 1 MNLKIILFQLPSQTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKERALGRLKGTAKKKERRDERPPLQDVPIAALNEQL 120
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 239 bits (609), Expect = 2.680e-71 Identity = 138/251 (54.98%), Postives = 164/251 (65.34%), Query Frame = 1
Query: 4 GTTPQGTKTTKAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RIST-----RSSATEGCSTENP--------TYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
GTTPQG KT KA+ ++GQKVV S+R+NSRENTT+V TISADG TW PTII KG +P + G P +F I + G P S+EVI+LAM L I+LFQLPSHTSHITQPLDVVAFG FK+ VT+VL+ +Y SGGLLP KRD+PGVIA AW A+FT E N+SSFAGAGLWPVN +RA+ RL+GTAK+ E + RPPL+DVPIA NEQL
Sbjct: 170 GTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGSTWAPTIIFKGQRLQP-----DWFAEKNGPPDARYTCTDSSFMQGNVFIKYLKDFHQQLCKRGLIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDVVAFGAFKREVTKVLSDYYRVSGGLLPQKRDVPGVIAAAWGATFTSERNRSSFAGAGLWPVNMERAMSRLRGTAKRNENQTGRPPLKDVPIAVGNEQL 415
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Match: A0A6H5KS78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS78_9PHAE) HSP 1 Score: 227 bits (579), Expect = 3.730e-71 Identity = 130/228 (57.02%), Postives = 153/228 (67.11%), Query Frame = 1
Query: 34 KAFAESGQKVVGSMRSNSRENTTVVATISADGHTWPPTIILKGHDFRPIGL*SEAARRVQGTPVRILRSCRETFSSPT*RISTRSSATEGCSTENPTYSCSMEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNSGGLLPLKRDMPGVIADAWKASFTPEINKSSFAGAGLWPVNKDRALGRLKGTAKKKERRDERPPLQDVPIAAPNEQL 717
KAFAE+GQKVV SMRSNSRENTTVV TISA+G TW PTII KG +P A R + T+ CSTE+ T+ ++ L + + ++LPSHTSHITQPLDVVAFG FKK VT+VL FYH + GLLPLKRD+PGVIA AW+ SFTPE NK+SF GAGLWPV+ DRAL RL+GTAK+KER RPPL+DVPIA +EQL
Sbjct: 2 KAFAEAGQKVVESMRSNSRENTTVVTTISANGATWAPTIIFKGQRLQPDWF----AERNGPKDASLT--------------------TKACSTESRTH-----ILVLDGHASHMSYELPSHTSHITQPLDVVAFGTFKKEVTKVLQDFYHANDGLLPLKRDVPGVIAAAWQKSFTPERNKASFGGAGLWPVDMDRALTRLQGTAKRKERPTGRPPLEDVPIAMTHEQL 200 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig716.12.1 >prot_P-littoralis_Contig716.12.1 ID=prot_P-littoralis_Contig716.12.1|Name=mRNA_P-littoralis_Contig716.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=127bp MEVIRLAMNLKIILFQLPSHTSHITQPLDVVAFGRFKKSVTRVLASFYHNback to top mRNA from alignment at P-littoralis_Contig716:57765..58481- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig716.12.1 ID=mRNA_P-littoralis_Contig716.12.1|Name=mRNA_P-littoralis_Contig716.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=717bp|location=Sequence derived from alignment at P-littoralis_Contig716:57765..58481- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig716:57765..58481- >mRNA_P-littoralis_Contig716.12.1 ID=mRNA_P-littoralis_Contig716.12.1|Name=mRNA_P-littoralis_Contig716.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=381bp|location=Sequence derived from alignment at P-littoralis_Contig716:57765..58481- (Pylaiella littoralis U1_48)back to top |