mRNA_P-littoralis_Contig716.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig716.1.1
Unique NamemRNA_P-littoralis_Contig716.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: A0A6H5KRV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV2_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 5.320e-102
Identity = 149/205 (72.68%), Postives = 179/205 (87.32%), Query Frame = 1 
Query:   55 MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            MAP L+L YFD AGAAEP+RWALE+G LEW DKRLTREEF ALKPSLPNGQVP+L +DG++L QSMA+LRYVG+LGGL P+DDL AAKCDAIMDC  D ++NIR SF+EKD+ KKMEMRADLAANFIP WL+NME+QLSST GT+F DK++VADIMIA RLH ++NGVLDGIPT++ D++ SL A+  ++V EPK+AAFL+KHAK
Sbjct:    1 MAPKLILKYFDKAGAAEPIRWALEKGSLEWEDKRLTREEFGALKPSLPNGQVPVLSIDGFELAQSMAILRYVGKLGGLNPSDDLAAAKCDAIMDCVTDLHINIRPSFMEKDEAKKMEMRADLAANFIPKWLSNMEKQLSSTDGTFFFDKMTVADIMIACRLHPMRNGVLDGIPTTIADSYPSLCAMCDAVVSEPKVAAFLAKHAK 205
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 2.380e-92
Identity = 135/206 (65.53%), Postives = 174/206 (84.47%), Query Frame = 1 
Query:   55 MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDA-HTSLSALYASIVGEPKIAAFLSKHAK 669
            MAP LVL YFD+ GAAEP+RWALEQ G EW DKRLT EEF  +KPSLPNGQ+P+LEVDGY LPQSM +LRYVG+LGGL+P+DDL+AAKCDA++D A+DFY+N+R ++ EKDQ K++EM  DLA N+IP WLAN+E+QL++T G YFA+K+SVADIMI  RL  +++G  +G+PT++ D+ + +L+ALY SIVGEPKIAAF++KH K
Sbjct:    1 MAPKLVLTYFDIPGAAEPIRWALEQSGQEWEDKRLTGEEFGVVKPSLPNGQLPVLEVDGYTLPQSMTILRYVGKLGGLHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAEKMSVADIMITTRLKTLRDGNYNGVPTTIFDSSYPNLNALYDSIVGEPKIAAFIAKHDK 206
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 1.380e-60
Identity = 114/212 (53.77%), Postives = 142/212 (66.98%), Query Frame = 1 
Query:   55 MAPT--LVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFAD-KLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK*SET 681
            MAPT  L L YFD AG AEPVR AL   G  W DKR++  EF ALKP LPNGQ+PILEV G  LPQS A LRYVG+L GLYP D L+AA  DA +D   D +M +  +  +KD+ ++MEMR +L  +F+PTWL N+E+ L++  GTYFA  KLS+ DI +  RL  +K G LDGIPTS+VD +  LSAL   +  EP IA +   H + SET
Sbjct:    1 MAPTTSLTLTYFDFAGPAEPVRMALAMTGQPWEDKRVSFSEFPALKPGLPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIVDEYPLLSALIERVNAEPNIAKY---HQERSET 209
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 3.900e-57
Identity = 96/201 (47.76%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:   55 MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFAD-KLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFL 654
            M P L+L YFD+    EP+R AL   G  W DKR+++EEF A+KPSLP  Q+P LEV G  +PQS+A +RY+G++GGLY  D ++AA  DA M+  ID + ++R +  E+D  KK+EMR  +  N++PTWL N+E  L +  G+YFA  KLS+ DI +  RL+ +K G LDGIP ++VD    LSAL  S++ E KI  +L
Sbjct:    1 MGPKLILSYFDIPALGEPLRLALAMSGQAWEDKRVSKEEFMAIKPSLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIVDDFPLLSALVQSVMSEEKIVKYL 201
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 5.380e-53
Identity = 92/206 (44.66%), Postives = 133/206 (64.56%), Query Frame = 1 
Query:   55 MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFA-DKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            MAP + L YF+ A   EP+R AL Q G+EW D R+  E++  LKP+LP  Q+P+LEVDG  +PQS+A+LRYVG++G LYP D + AA  D+  D   D    +RG   EKD  KK ++R DL    +PTWLAN+E+ L    G YFA DKLS+ DI +  RL+ + +G  +G+P++L+D    +S+L   ++ EP+I A++ +  K
Sbjct:    1 MAP-MKLTYFEFAALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPTLPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLLDESPLVSSLVQRVMAEPRIVAYMEERPK 205
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: D7FHE9_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE9_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 2.110e-48
Identity = 80/113 (70.80%), Postives = 100/113 (88.50%), Query Frame = 1 
Query:  331 MDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            MDCA D+Y+NIR SF+EKD+ KKMEMRADLAAN+IP WL+NME+QLSST GT+F  +++VAD+MIAYRLHH+KNGVLDGIPT++ D+  SL ALY ++V EPK+AAFL+KHAK
Sbjct:    1 MDCATDYYINIRPSFMEKDEAKKMEMRADLAANYIPKWLSNMEKQLSSTDGTFFDGQMTVADMMIAYRLHHMKNGVLDGIPTTIADSCPSLCALYDAVVSEPKVAAFLAKHAK 113
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 3.840e-48
Identity = 89/207 (43.00%), Postives = 131/207 (63.29%), Query Frame = 1 
Query:   55 MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFA-DKLSVADIMIAYRLHHIKNGVLD-GIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            MAP + L YFD+A   E +R AL Q G+EW D R+T EE+  LKP+LP  Q+P+LEVDG  +PQ+ A+LRYVG++G LYP D + AA  D+  D   D + ++R  F EKD   K ++  DL    +P WLAN+E+ L    G YFA DKLS+ DI +  RL+ + +G  D  +P+++++    LS+L   ++ EP+I A++ +  K
Sbjct:    1 MAP-MKLTYFDIAALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPTLPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAILEEFPLLSSLVQRVMAEPRIVAYMEERPK 206
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BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: W4G913_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G913_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.120e-43
Identity = 88/206 (42.72%), Postives = 126/206 (61.17%), Query Frame = 1 
Query:   61 PTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADD-LDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSST--PGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            P L + YFDMAG AE VR AL  GG+ + D+RL RE++ ALKPSLP  Q+P L VDG+ L QS A+ RY G L GLYP ++ LDA + D I D   DF      SF E D  KK  MR +LA+   P   A +E +++S+   G +F D +S+AD+ +   +  +K+G +D IPT++ D +T +  ++ ++   PK+AA+   H K
Sbjct:    4 PALKVTYFDMAGRAETVRLALTIGGVPFEDQRLQREQWAALKPSLPFRQLPALTVDGHVLCQSHAIARYAGSLAGLYPTENRLDACRVDEITDFCEDFMQKATPSFREADPAKKKAMRVELASTTFPEMFALLEARVASSGSKGPWFLDAISIADLDVYCMVSMMKSGFMDDIPTTICDHYTKIMTIHNAVAAHPKVAAWNEAHKK 209
[Close]
BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: A0A024UKT9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKT9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 4.110e-39
Identity = 85/206 (41.26%), Postives = 121/206 (58.74%), Query Frame = 1 
Query:   61 PTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADD-LDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSS--TPGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            P+L + YFDMAG AE VR AL  GG+ + D R  REE+ ALK +LP  QVP L VDG  L QS A+ RY G L GLYP ++ LDA + D I D   D    +  SF E D  KK  MR +LAA   P     ++ +L+S  + G +F + +++AD+ +   +  +K+G LD IPT++ D +  + A+Y ++   P + A+   HAK
Sbjct:    4 PSLKVSYFDMAGRAETVRLALTIGGVPFEDHRFQREEWPALKQTLPFKQVPALTVDGQVLCQSHAIARYAGSLAGLYPTENRLDACRVDEISDFCEDVMQKVAPSFREADPAKKKAMREELAATTFPEMFGMLDARLASYGSNGPWFLNSITIADLDVYCFVSMMKSGFLDDIPTTICDGYPKIMAIYNAVAAHPAVVAWNEAHAK 209
[Close]
BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 149 bits (375), Expect = 1.920e-38
Identity = 75/201 (37.31%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:   73 LVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNGQVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFYMNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQL--SSTPGTYFADKLSVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFLSKHAK 669
            L YFD  G AEP+R A   GG+++ D R  RE++  LKP  P G VP L +      QS A+LRY G+L GLYP D ++A   D I+D   D +++++ +  E+D+ KKMEMR  LA   +P WL    + +  + + G    D L++AD+ +   +  + +G+LDGIP ++ +    ++AL   +  + K+ AF +KHAK
Sbjct:    5 LSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFEAKHAK 205
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRV2_9PHAE5.320e-10272.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B1N8E8_9PHAE2.380e-9265.53Glutathione S-transferase 3 n=1 Tax=Laminaria digi... [more]
B1N8E7_9PHAE1.380e-6053.77Glutathione S-transferase 2 n=1 Tax=Laminaria digi... [more]
B1N8E6_9PHAE3.900e-5747.76Glutathione S-transferase 1 n=1 Tax=Laminaria digi... [more]
D8LHF0_ECTSI5.380e-5344.66Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D7FHE9_ECTSI2.110e-4870.80Glutathione S-transferase n=2 Tax=Ectocarpus TaxID... [more]
D8LK37_ECTSI3.840e-4843.00Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
W4G913_9STRA5.120e-4342.72Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A024UKT9_9STRA4.110e-3941.26Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A061SAH2_9CHLO1.920e-3837.31Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig716contigP-littoralis_Contig716:32522..39336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008864522.1
PFAMsGST_C_3,GST_N
Model size1528
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00069,RC00672,RC00840,RC00948,RC01704,RC01705,RC01706,RC01758,RC01759,RC01765,RC01767,RC01769,RC02243,RC02527,RC02939,RC02940,RC02942,RC02943,RC02944
KEGG koko:K00799,ko:K04097
KEGG TC1.A.12.2.2,1.A.12.3.2
KEGG ReactionR02266,R03522,R07002,R07003,R07004,R07023,R07024,R07025,R07026,R07069,R07070,R07083,R07084,R07091,R07092,R07093,R07094,R07100,R07113,R07116,R08280,R09409,R11905
KEGG Pathwayko00480,ko00590,ko00980,ko00982,ko00983,ko01100,ko01524,ko05200,ko05204,ko05225,ko05418,map00480,map00590,map00980,map00982,map00983,map01100,map01524,map05200,map05204,map05225,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0008150,GO:0010033,GO:0014070,GO:0042221,GO:0042493,GO:0045472,GO:0046677,GO:0050896,GO:0097327,GO:1901654,GO:1901700,GO:1904643
Exons7
Evalue5.23e-43
EggNOG OGsKOG1695@1|root,KOG1695@2759|Eukaryota
EC2.5.1.18,5.3.99.2
Descriptionglutathione transferase activity
Cds size618
COG categoryO
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig716.1.1prot_P-littoralis_Contig716.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig716 32576..38480 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791490.2396133-UTR-P-littoralis_Contig716:32521..325751680791490.2396133-UTR-P-littoralis_Contig716:32521..32575Pylaiella littoralis U1_48UTRP-littoralis_Contig716 32522..32575 +
1680791490.3456597-UTR-P-littoralis_Contig716:38480..393361680791490.3456597-UTR-P-littoralis_Contig716:38480..39336Pylaiella littoralis U1_48UTRP-littoralis_Contig716 38481..39336 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791490.2605307-CDS-P-littoralis_Contig716:32575..326041680791490.2605307-CDS-P-littoralis_Contig716:32575..32604Pylaiella littoralis U1_48CDSP-littoralis_Contig716 32576..32604 +
1680791490.2709363-CDS-P-littoralis_Contig716:32772..328791680791490.2709363-CDS-P-littoralis_Contig716:32772..32879Pylaiella littoralis U1_48CDSP-littoralis_Contig716 32773..32879 +
1680791490.2799792-CDS-P-littoralis_Contig716:33686..337791680791490.2799792-CDS-P-littoralis_Contig716:33686..33779Pylaiella littoralis U1_48CDSP-littoralis_Contig716 33687..33779 +
1680791490.2925913-CDS-P-littoralis_Contig716:34342..344581680791490.2925913-CDS-P-littoralis_Contig716:34342..34458Pylaiella littoralis U1_48CDSP-littoralis_Contig716 34343..34458 +
1680791490.303386-CDS-P-littoralis_Contig716:36390..364311680791490.303386-CDS-P-littoralis_Contig716:36390..36431Pylaiella littoralis U1_48CDSP-littoralis_Contig716 36391..36431 +
1680791490.3130727-CDS-P-littoralis_Contig716:37548..376091680791490.3130727-CDS-P-littoralis_Contig716:37548..37609Pylaiella littoralis U1_48CDSP-littoralis_Contig716 37549..37609 +
1680791490.3272388-CDS-P-littoralis_Contig716:38309..384801680791490.3272388-CDS-P-littoralis_Contig716:38309..38480Pylaiella littoralis U1_48CDSP-littoralis_Contig716 38310..38480 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig716.1.1

>prot_P-littoralis_Contig716.1.1 ID=prot_P-littoralis_Contig716.1.1|Name=mRNA_P-littoralis_Contig716.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=206bp
MAPTLVLVYFDMAGAAEPVRWALEQGGLEWTDKRLTREEFQALKPSLPNG
QVPILEVDGYQLPQSMAMLRYVGRLGGLYPADDLDAAKCDAIMDCAIDFY
MNIRGSFVEKDQTKKMEMRADLAANFIPTWLANMEEQLSSTPGTYFADKL
SVADIMIAYRLHHIKNGVLDGIPTSLVDAHTSLSALYASIVGEPKIAAFL
SKHAK*
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mRNA from alignment at P-littoralis_Contig716:32522..39336+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig716.1.1 ID=mRNA_P-littoralis_Contig716.1.1|Name=mRNA_P-littoralis_Contig716.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6815bp|location=Sequence derived from alignment at P-littoralis_Contig716:32522..39336+ (Pylaiella littoralis U1_48)
AGCAACAGCAGCAACAACAGCAGTTTCACCACCAGTAAATCCAGCTCAAG
AAATATGGCTCCTACGCTCGTCCTCGTTTACTTGTGAGTGTGTGATAAAA
CATCACGGAGAGGTTGATTGATCCATATACTTCAGGCGCTCCTTGGACCC
TGGGTGGTGTCTGATGTGCGGCAGTGCCCTTACTCCCTGTGCATCGTTGA
CGAACTCCTCTATCCGTCTCCTTCTGTGCACGCCTCTCTGCCTTGGTACA
GCGACATGGCTGGTGCCGCTGAACCGGTGCGTTGGGCATTGGAGCAGGGA
GGGCTTGAGTGGACCGACAAGCGCCTGACCAGGGAAGAGTTCCAAGCTCT
CAAGCCAAGTGAGCGTCTAACGAGTAAATGCAATATGAATATGGAGCAAT
CCGTTCCAATCCTCTTCCTGACTCCCCTGTATATGTCCTTCGGTAAGCTT
GCTTTTGGGTCTGCATTACTCGAGAGTGTCGCCAGTGTGCGGTCGTATTC
ATGTCTGGCCGTTGGATTTGACCCGCTTTCTGCTCGTGCAGATAAGTGAA
GAGTTGAAGATTCTCGATGCGGGATACAGAGTAACAGGGAATCAAGATCC
ACCAGGAGTTCTCTCTTTTGTCCACAAACTGAACTCACTGAAAACAGCAA
ACAGCAGGTACATGTTGCGTCGATCTCACCTTTCCCTCGGTGGGCCTCAG
GCTGGCTCCCTTGTTGCCGCTACAAGTAGGTGTGCGCGTGGAAGTGCGAT
ATTTTGCAGCATCTTCTGGGTTCGACCTGTTGCTGGTTGTAAGTTTGGTG
TCTTGGCCCCTCGATTTATGTGCATCGCGGGGGATATATCTTGAAAATTG
CCCGCTCAGTTTAGAACAGAAAGAACATTATTGAAACCCACACGCACAAC
CCGCTCTATTTCGGCGCTTCAAACGGCCTCTGAGCACCCCACCGCGCTGT
ATGCACCTCCCTACCGTAAAGCTTGTACTCGGCAAACAAACGCGCTTTCT
TCCTAGTTCATGCACTACGTTGGTTGTGTTTTGTTTTACCTTTCGGCGAA
TACCTCCCCTCCTTTGTACCCACTACCCACGCTCGCCCGCGCCACGCCGT
GACTCTGTGTCGACATGAAAATGTTTTTTTCTCGTGTGGTGAACCTCGCT
CTCTTTGCGGGAAAGGCCTGCCTAACGGACAGGTGCCTATCCTCGAGGTG
GACGGCTACCAGCTCCCCCAGAGCATGGCCATGCTCCGCTACGTCGGCAG
GCTGGGCGGTGAGAAGATCCCAAGTGATTGAACGGCCGTGGGTACAATTA
TGTGTTGAACGACTATGATGCAAGGCTCCAGTGAGTCCCATATCTCAAAT
TCGTCCATCAAGCTCCCATTTTGGCGCGCGCCCGCGCGGCGCTTAGTCAA
AGCTTGAAACTTTGTTTTCTTTCTTCCGCTTTTTGCAGGAGTTGAGGAAT
GTTTCTGCCGTCGTCGTAGAACCCTATCGCAGCGGCACGAGATGTATGAA
AGGGTGTTGCCGGCAGTATTGTTTCTTTGGTGTGTGGTTACACATCAGTA
AACGTCTTTTGTGGTGCTCGGTACCGAAAACAGAGGGAAAGCGCGCCGCG
TGGAGCAAACCTCTCTATTTCTGTTGTTTTATGCGAATTTGCCTGGTACA
GCAGGACTGACAGACATACATGTGTGAGACCCTTGTTCGTGAAAAATGAT
GATCTTCAGAGATCTTTGTTTTGCGTAATTTTTTGTGTGTCGTCAGTGAC
TTGAGTCTCTCACCCGCACCAGCGCCTCTATTGCTGCTGCTGCTGCTGCT
GCGAATGCGCTGCGAATGCAGGTCTTTACCCCGCCGATGACCTGGATGCG
GCAAAGTGCGACGCGATCATGGACTGCGCCATCGACTTCTACATGAACAT
CCGCGGTAGTTTCGTGGAGAAAGACCAAACCAAAAAGGTACGAATGAATA
CCACGTCGCTCAGGAGAACCTCCCAAAAATTGTGTGGAGCGTCCTTGTAG
AATCGTCTGTGACTAACGAGGAACCCGACGCCGTTAATATTCAGTCGAGG
TACAGCAGTAAGGGTTTCATGATGCGTTTGACATGTACCCGGAATGGAGG
GGGGGACAACTCAAACCATTCTCCCCATTCGTCAATTTTCCTCCAGAGTG
CATCATATCACGTTCTATAGACATTTCACATTTCGAGAGGCATGTTTACT
CGATATTAGTCTTCCGAAAGCTATTCAAAAGGGTCAAATCGAAATAATCC
GAGTTTAGAATCGAGATGCGGCTCAAAAACCGAGTGGACCTCGAACAAGG
AACAGAAAGGTGCTTACTGTGCATTCTGGGAGCACATCGGTGCACCTCTA
TTGTCTTTGCTCAGCTGGTGTCAGCACAACGTGTAGCCCCCTGTTGTACA
TGGGTGTTACCTCGGCACAAGGCTGGTATCCCGTACAGGCTGGTTCACGC
AAGAAACCCCAAATTCATTCAACATCATTTTCTCACGCCGTTTCTTCGAG
TTAGACCCTGAAACTTTGCACACGTGTTCGTTGTGTCACTGCGAAAAATC
GACCGACCGGGGTGCATCGATTTTTTTTCATTCAATAGATATATTAGTAT
AAAGGCATGTTGGGTCTACATTGCTCGATTGGGACCCCAGAAATCCGGTC
AAAAAAAAACAATCGATGCACCCCGGTCGGTCAATTATTGGTAGTAACCC
AAGGAACACGCGTGCACAGTTTCAGGGTCTAACTCGAAAAAACCGCGCGA
GAAAAACGCACTTCAGTGTTGTAAAGTACATAAACACCCTAGGTAGGATA
AAGACTAGAATCGACCGATTTCAAGCGTTTTTACGCTATTATTTGCCAAA
CTACGTCAGTTTGTTTGGATTTTCGAAAAACAAAACCGCAAATGTCCTCC
TTAGGACACAGAGGGACCATACGTGTTACAAAAAAATAGTAGCAAAGGTC
GAGAGCACCACTTAAAGTGTGCAGAAGTGTACATATTGACAACATCAGCA
TCCTTATACTCGCAAGATCACAAAACAACATTGTAGCTGCCTGCTGTACA
CATACGGTACCTCAACACGAAAATGGTATCGCCAAGGACAAAGAGCACTC
TGTTTGAGCCGAGTCTGCACTCTGTTTGAGCCGAGTCTGCAGAGACCTGA
GAGAGGGGCTCATCCGCGTGAAATGTTGCTTCTAGAACATGTACAACGAA
CGGCTGAGATCAAGGTAACTCCATAAGGTTATGGAGGTTGTGCAACACGC
GATTAAACATAAACATCTTGCCGATTTCTTGCTAGCTTTTTCGGGTATCG
ATCTCCTACCAACGCGCCTAAGTCAGGCAGATACGGAGCACTACCGTGCA
ATGTTGTTAAGAAGCGGTAGCTCCCGCTCTTGTGTTGACATCGTCGCAGG
GTGCATTTCACAACCGTCTATGTATATTCTGACTTGCTGTTCGTTCCTCC
GCGCTTTAGATTTTAGATTGACGCAGCTGCCTGCAGCTGCGCGGAACGAC
CCTCATTTCTGAAATCGAAATCTAATTTACATGCGAAGTATAGGTTTTAA
TTTTTTATTTTAGATTCGGCCATCCCGCGGTGTGGCCACCCTGAGGTTGC
CGCCGTTACGTTTTGTAACCCTGTCCGTCGTGTGCTGTTGTATTTTTACC
TCCAACTCTTTTAAGTCGTCTTACTTTTTGGTCGTCTGACGGTGCAGTAC
TGGTACCGTGTACTGCGTGTTTCAGAGCCGTGTTTTTTGTTTGCGCAGAA
ACGTTTCACTGCTGTTTTGCTGAGTTTTAAGTCTCGTCATTCTTCGTTTT
TCTGACGGGTTTGGTCTACTGGCCGACTGTCACATCCACCGCCCGCGTTT
TCCTCGCGTATGCATGCAGATGGAAATGCGCGCGGACCTGGCGGCCAACT
TCATCCCTACGTGAGTGTGCCTCAGCTGTTTTTCCTTCTTCTTCTTTTCT
GTATGATAGGCGTACCTTACCGCAATCAACTCTCCCCCCAAAATCCCCCA
AAATTGGGTACACACACCGATTTTCGGGAAGTTGTTGGGACCGGATTGTG
TCTGGGGGCGCAGGTAAAACACCCGTCCGTCTAGGTTTACCTGTACGTTT
TCCTTTTTATCACGTGCTTCAGGAGCTGCTCGTTTACCTTTACTTTTGAC
TGCATCAACTTCTGCAGAAGCTTCTCCAGTACAACATAGTTTATGAGCTA
GGTTAGGATTCGACTCCCCAGCTTGCCGAACAACCGTGGGTACGTTTCGT
TGTCCTTGGTACAGGATAGCCTTACATTTTGAGTGAATATAGTTATAACA
ATTCGCACGGTGCCGCACAGTTTCACCGTTTTGTGTTGCATACTCTCGCC
GGTATTTTTCAGTACTGCATCAAACTTTAATTGAGAAGCAGGCCACGAGC
GAAGCGAAGTGTAAGTTCCTTGTCGAACTGCTTCGAATTTATACCGACTT
GTCGTTATGTGGAAGTGTGAGTGCATGTGCGAATAAATAAATTAAAATAA
AAATCGGAGACAGGGGTACCTTTTTATTTAATTTTGGGAGGTTTATGGTG
TCTGTGTGTGTCCGAGATAATGGCTACATTTTGCAACACCTTGGCACCAG
TTCGGCACAGATCGCTACGACCAAGGGCTTGAACTGATGAGGTAAATAGC
ATCTACCCACTGCTGCTGGGTAGATGTTCACCGCAGCCCGTGTCCTGTGC
GCACAGCTATCTTGTCGGAGGCGCGTTATTATTGGGGTCCCTCTTTTGTG
AAAAGTGATGAGAGTCGTTTTGTGTTCGTTGTGCTAGCGCACACGCACAC
CAGCACACCACCAGCTGTATTCTGCAGCAGCAGCACTGGTGTGAAGCAGC
AGGCATATCATGCGCCGCCAAACAGCAACGCACCCGGCTTGACGCAGTTC
TTTGAGAAGCGGCGCTCCAACGCACACTGCTTCTCAACCCCGATCCACTA
GTGTCCACTTTCTTCACGGGACTCAGTTCTACTTGTTCCCCTCCTGTTTT
TCGCCGTCATGCGTTCGTTTTTTCCAGCTGGCTCGCGAACATGGAGGAGC
AGCTGTCGTCGACCCCTGGCACCTACTTCGCCGACAAGGTACGGTGCGAC
GTGTTTCGTGTCCTCGTGCTTGGGTTCCATCTACCCTCCGGCAGCTGCCC
ATTGTACGTTGAATCACACTCGCTTAACCCTTATGTAACTTCTAGGCGAT
TTATTGATCAAACATTATTAATCCTTTATTTTATTTTATTTTCTTTGGCC
AGTCATTGCTCGTAAGCCCTCACACTCAAGATGGTCCGTTGGGTACACAC
GAGAGCGGTCGTGAGGTCGGGGTCTGTACTGAATGAACTACGGCGGCAGA
ACTCGTTCGTGCACACCTAGTTCACGCCGCACATCTGTCATTGTCCTCGC
ATCTCCACATCGCAGCTTTCGTTGTTTGATCATCTCTTCTTTGAGTACGG
AGTAAACCAGGCCAATATGAAGCTTCTGACTGGAACATGGGTCTGAGTGA
TCTGCTGTGAATCGTTAGTACCACGGGCCGGCGAGGTGCTTTCCTGTGCC
TCAGCAATACTCTCGCTCCTGCTGCTCACCGATGCGTGATGTACCGGTAT
GCGATCTCAAGAATTGCAGCTTTTCTACGGCAGTTGTCCTCAATGAACCG
ACCAAATAGCACCTGTCTCGCGCACCCACCCACCCCCCCTGTTTGTTTTC
GTGCCCCTCCTCGCCGCTACTCTTTGTGTTCACATCGTGTGTACGACGGC
GGACAACAACCACACGCACACGGGGAACGCTATCTTAGCTTTCGGTGGCG
GACATCATGATCGCCTACCGCCTACACCACATCAAGAACGGCGTCCTCGA
CGGCATCCCGACCTCGCTCGTCGACGCGCACACCTCTCTCTCTGCTTTGT
ACGCCTCCATAGTAGGGGAGCCCAAGATTGCAGCATTTCTTTCCAAGCAT
GCCAAGTGATCTGAAACAGTAGTACGCAAACCCTGTTGGGATATAGATTT
TGTGCGAGATGGGTGGTGTGCATCAAGCTGCAGGGCGCACCAAGTACGGT
AGCGTACAAGAAATTAGTAAACACGTCCGTATGGGGCTAGGCAGTGGTGC
ATTACATAGTGTGACTGGCTTGTAGCATCATTCTTTGGATGGAAGGTGTT
GGTCAGCTGTAGAATTCAGCGAGTATATACATTTTTGAGGGCCTTTTTGT
CTATTGGTGCTGTGTTTGAACAGCAAGGCAACATGTTGTTCAAAGAGCTT
GATGCGGTTTGTTGTTGATTGTTGACGGTGATTTTTATCCCAACAGACTA
CAGCCTTCGCATGCACGCACGGCCATTGTGCCAAGATTGAGCATGATACC
AATCTACAAGTTTGGTGTTTTAACCTTGAGCTTGGTACGACGTGCTGTGG
CTTGGTGCGTTTTTTTTGTATGCGGGAGAGTTTGGCATATGATTCTCTAG
CCCGTGAGCATCGTGCCTTGCTTTCCGAGTCACGTCACGCAGACCTGACC
GTTAGCTTGACCTTTCGCTTGCCCATACTTGCGAGCGTGGGGCGCGATTG
CCCCACTTGGAGTACTGTACCGTAGAGACCGGGCAAACGGCCCCCCGGGT
GAACGAAGACGAAGAAACATTTAGAAAAACGGCGCCCCGAGGGACGTTCA
CCACGTACGTACCACCCGAGGCATTTTCTAAACCAGATACTGAACTTTTG
CGCCGACGGGGCGATGAAAGAGGAAGGTCGGCGTACCACACCCACACCCG
CACCTTTCGACCCGCACACGTACATCAAACGGAGAGAACACTTTTCCTTT
TCGTTTGCGCTTTCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig716:32522..39336+

>mRNA_P-littoralis_Contig716.1.1 ID=mRNA_P-littoralis_Contig716.1.1|Name=mRNA_P-littoralis_Contig716.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=618bp|location=Sequence derived from alignment at P-littoralis_Contig716:32522..39336+ (Pylaiella littoralis U1_48)
ATGGCTCCTACGCTCGTCCTCGTTTACTTCGACATGGCTGGTGCCGCTGA
ACCGGTGCGTTGGGCATTGGAGCAGGGAGGGCTTGAGTGGACCGACAAGC
GCCTGACCAGGGAAGAGTTCCAAGCTCTCAAGCCAAGCCTGCCTAACGGA
CAGGTGCCTATCCTCGAGGTGGACGGCTACCAGCTCCCCCAGAGCATGGC
CATGCTCCGCTACGTCGGCAGGCTGGGCGGTCTTTACCCCGCCGATGACC
TGGATGCGGCAAAGTGCGACGCGATCATGGACTGCGCCATCGACTTCTAC
ATGAACATCCGCGGTAGTTTCGTGGAGAAAGACCAAACCAAAAAGATGGA
AATGCGCGCGGACCTGGCGGCCAACTTCATCCCTACCTGGCTCGCGAACA
TGGAGGAGCAGCTGTCGTCGACCCCTGGCACCTACTTCGCCGACAAGCTT
TCGGTGGCGGACATCATGATCGCCTACCGCCTACACCACATCAAGAACGG
CGTCCTCGACGGCATCCCGACCTCGCTCGTCGACGCGCACACCTCTCTCT
CTGCTTTGTACGCCTCCATAGTAGGGGAGCCCAAGATTGCAGCATTTCTT
TCCAAGCATGCCAAGTGA
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